Nannospalax galili (Upper Galilee mountains blind mole rat): 103732075
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Entry
103732075 CDS
T03372
Name
(RefSeq) tripartite motif-containing protein 6
KO
K11999
tripartite motif-containing protein 6/22/34
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngi04121
]
103732075
Ubiquitin system [BR:
ngi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103732075
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
PRY
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-RING_10
FAM76
RE_Alw26IDE
zf-RING_6
zf-Nse
zf-ANAPC11
U-box
TRAF3_RING
DUF87
Sina_RING
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
103732075
NCBI-ProteinID:
XP_008828818
LinkDB
All DBs
Position
Un
AA seq
486 aa
AA seq
DB search
MTAAVLVDIQDEVTCPICLELLTEPLSIDCGHSFCMACITGNTDNSVLGKEGKSSCPVCR
TSYQPGNLRPNRHLAVIVKRLREVVLGPGKQLKVILCTLHGEKLQLFCKEDGKLICWLCE
RSQEHRGHQTFLMEEVAQEYQEMFQESLKKLKREQQEAERLKAIIREKRESWKNQMEPER
HRIQTAFNQLRSILDREEQRELKNLEEEERKGLSIIEKAEGDLIHQSQSLKELISDLEHR
CQGSTVDLLQDVNDITKRSEFWTLRKPQALPTKLRSMFRAPDLKKMLRVFRELTDVQSYW
VDVTLNPHTANLNLVLSKNRRQVRFVGAKSEPSCLEEHYDCSVLGSQHFSSGKYYWEVDV
AKKTAWILGVCSSPGEPMFSCQYANKQSAFSRYQPQSGYWVIGLQHKHEYRAYEDSASSL
LLSMTVPPRRVGVFLDYEAGTVSFYNVTNHGLPIYTFSKYYFPSALCPYFNPCNCVVPMT
LRRPSS
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgcagtcctggtggacatccaggatgaggtgacctgccccatctgcttggag
ctcctgacagaacccctgagcatagattgtggccatagcttctgcatggcctgcatcaca
ggaaatactgacaattcagtgctcggcaaagaagggaagagcagctgtccagtatgccgg
accagctaccagcctgggaacctccggcctaatcgacacctagcggtcatagtgaagagg
ctcagagaggtagtgctgggcccgggaaagcagctgaaggtcattctctgtacacttcac
ggagagaaactccagctcttctgcaaggaggacgggaagctcatttgttggctttgtgag
cgttctcaggagcaccgtggtcaccaaacattcctcatggaggaggtggcccaggagtac
caggagatgttccaggagtctctgaagaagttaaagagagagcagcaagaagctgaacgg
ctaaaagctattattagagagaagagggaatcctggaagaatcagatggagcctgagaga
cacaggatccagaccgcgtttaaccagctgcgaagcatcctggacagagaggagcagcgg
gaactgaagaacctagaagaggaagagaggaagggactgagtatcatagagaaagctgag
ggggacctgatccaccagagccagtcactgaaagagctcatctcagacctggagcaccga
tgccaggggtccacagtggacctgctgcaggatgtgaatgatatcacaaaaaggagtgag
ttctggaccctgaggaagccccaagctctccccaccaagctgagaagtatgtttcgagct
ccagatttgaaaaagatgctgcgagtctttagagagctgacagatgtccaaagctactgg
gtggacgtgactctgaatccacacacggctaatttaaatcttgtcctgtctaagaaccgg
agacaggtgaggtttgtgggagccaagtccgagccttcctgtctggaagaacattatgac
tgtagtgtcctcggctctcagcacttctcctcgggaaagtactactgggaggtggacgtg
gccaagaagacggcctggatcctgggggtgtgcagtagtccgggggagcccatgttctcc
tgccagtacgctaacaagcagagcgctttctccaggtatcagccgcagagcggatactgg
gtgatcgggttgcagcataagcacgaatacagagcctacgaggactccgccagctccctg
cttctctccatgaccgtgccccctcgccgtgtcggggttttcttagactatgaggctggc
actgtctccttttataatgtcacaaaccacggcttgcccatctataccttctctaagtat
tactttcctagtgcactttgtccatattttaatccttgtaactgtgtagtcccgatgact
ctgcggcgcccaagctcttga
DBGET
integrated database retrieval system
