Nannospalax galili (Upper Galilee mountains blind mole rat): 103732330
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Entry
103732330 CDS
T03372
Symbol
Scn1a
Name
(RefSeq) sodium channel protein type 1 subunit alpha
KO
K04833
voltage-gated sodium channel type I alpha
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
103732330 (Scn1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ngi04040
]
103732330 (Scn1a)
Ion channels [BR:
ngi04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
103732330 (Scn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
GPHH
ATP-synt_B
IQ
Neur_chan_memb
FUT8_N_cat
Pns11_12
Motif
Other DBs
NCBI-GeneID:
103732330
NCBI-ProteinID:
XP_008829106
UniProt:
A0A8C6S057
LinkDB
All DBs
Position
Un
AA seq
2008 aa
AA seq
DB search
MEQTVLVPPGPDSFNFFTRESLAAIERRIAEEKAKNPKPDKKDDDENGPKPNSDLEAGKN
LPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKI
AIKILVHSLFSMLIMCTILTNCVFMTMSNPPEWTKNVEYTFTGIYTFESLIKIIARGFCL
EDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVQWPPSNASLEEHTVEKNITKDY
NGTLVNETVFEFDWKSYIQDTRYHYFLEGFLDALLCGNSSDAGHCPEGYVCVKAGRNPNY
GYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILA
VVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEAAQQAAAATASEHSREPSAAGRLS
DSSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSIRRKGFPFSIEG
NRLTYEKRYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFED
NESRRDSLFVPRRHGERRNSNLSQTSRSSRMLAVFPANGKMHSTVDCNGVVSLVGGPSVP
TSPVGQLLPEVIIDKPATDDNGTTTETEMRKRRSSSFHVSMDFLEDPSQRQRAMSIASIL
TNTVEELEESRQKCPPCWYKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVL
NTLFMAMEHYPMTDHFNNVLTVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIV
TLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAII
VFIFAVVGMQLFGKSYKDCVCKIASDCTLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCM
EVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAVDRMH
KGIAYVKRKIYEFIQQSFVRKQKILDEIKPLDDLNNRKENCMSNHTTEIGKDLDYLKDVN
GTTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEDFSSESDLEE
SKEKLNESSSSSEGSTVDIGAPAEEQPVMEPEETLEPEACFTEGCVQRFKCCQISVEEGR
GKQWWNLRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFT
YIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRA
LRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTT
TGDMFEISEVNNHSDCLKLIERNETARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIMYA
AVDSRNVELQPKYEESLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFM
TEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTRQVFDISIMILICLNMVTMMV
ETDDQSEYVTSVLSRINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMF
LAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLV
MFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPD
CDPEKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPL
SEDDFEMFYEVWEKFDPDATQFMEFEKLSQFAAALEPPLNLPQPNKLQLIAMDLPMVSGD
RIHCLDILFAFTKRVLGESGEMDALRIQMEERFMASNPSKVSYQPITTTLKRKQEEVSAV
IIQRAYRRHLLKRTVKQASFTYNKNKLKGGANLVKEDMIIDRINENSITEKTDLTMSTAA
CPPSYDRVTKPIVEKHEQEGKDEKAKGK
NT seq
6027 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacagttcttgtaccaccaggacctgacagcttcaacttcttcaccagagaa
tctcttgcggctattgaaagacgaattgcagaagaaaaggctaagaaccccaaaccagac
aaaaaagatgatgatgaaaatggcccaaagccaaatagtgacttggaagctggaaagaac
cttccatttatctatggagacattcctccagagatggtatcagagcccttggaggacctg
gacccttactacatcaataagaaaacttttatagtattgaataaagggaaggccatcttc
cggttcagtgccacctctgccctgtacattttaactcccttcaatcctcttaggaaaata
gctattaagattttggtacattcattattcagcatgttaattatgtgcactattttgaca
aactgtgtgtttatgacaatgagtaaccctcctgaatggacaaagaatgtagagtacact
ttcacaggaatatatacttttgaatcactaataaaaattattgcaaggggcttctgttta
gaagattttactttccttcgtgatccatggaactggcttgatttcactgttattacattt
gcatatgtgacagagtttgtggacttgggcaacgtctcagcactaagaacattcagagtt
ctgcgagcactgaagacaatttcagtcattccaggcctgaagaccatcgtaggggccctg
atccagtctgtgaagaagttgtctgatgtcatgatcctcactgtgttctgtctcagcgtg
tttgcgctaattgggctgcagctgttcatgggaaacctgaggaataaatgtgtacaatgg
cctcccagcaatgcctccctggaagagcatactgtagagaagaatataactaaagattat
aatggcacacttgtgaatgaaactgtgtttgagtttgactggaaatcctacattcaagac
acaagatatcattatttcctggaaggttttttagatgccctactgtgtggaaatagctcg
gatgcaggccattgtcctgaaggatatgtgtgtgtaaaagctggaagaaaccctaattat
ggctacacaagctttgataccttcagttgggcatttttgtccctgtttcgactgatgact
caggacttctgggaaaatctttaccaactgacccttcgtgctgctgggaaaacatacatg
atattttttgtgttggtcattttcttgggctcattctacctgataaacttgatcctggct
gtggtggccatggcctatgaagagcagaatcaggccaccttggaggaggctgagcagaag
gaggcagagtttcagcagatgctggaacagttgaaaaagcagcaagaggccgctcagcaa
gcagcagctgcaacagcctcagaacattctagagagcccagtgcagcaggcaggctctca
gatagctcatccgaagcctccaagttgagttccaagagtgctaaggaaagacgaaatcgg
agaaagaaaaggaaacagaaagagcagtctggtggagaagagaaggatgaagacgagttc
cacaaatctgaatccgaagacagcatcaggaggaaaggatttcctttctccatagaaggg
aaccgattgacatatgaaaagaggtactcttccccacaccagtccttgttgagcatccgt
ggctccctattttctccaaggcgaaatagcaggacaagtcttttcagctttagagggcga
gcaaaggatgtgggatccgaaaatgactttgctgatgatgagcacagcacctttgaggat
aacgagagccgaagagattccttgtttgtgcctcgacgacatggagagcgccgcaatagt
aacctaagtcaaaccagcaggtcatcccgaatgctggcagtgtttccagcgaatgggaag
atgcacagcacggtggattgcaatggtgtagtttccttggttggtggaccctcagttcct
acgtcgcctgttggacagcttctgccagaggtgataatagataagccagctactgatgac
aatgggacaaccacagaaactgaaatgagaaagagaaggtcaagttctttccatgtttcc
atggactttctagaagatccatcccaaaggcaaagagcaatgagtatagccagcatctta
acaaacactgtagaagaacttgaagaatccagacagaaatgcccaccctgttggtataag
ttctccaacatattcttaatttgggactgttctccatattggttaaaagtaaaacatatt
gtcaacttggttgtaatggacccatttgttgatctggccatcaccatctgtattgtatta
aatacacttttcatggccatggagcactaccccatgacagatcatttcaacaatgtgctt
acagtaggaaacctggttttcactgggatctttacagcagaaatgtttctgaaaattatt
gccatggatccttactattatttccaagaaggctggaatatctttgatggtttcattgtg
acacttagcctggtagaacttggtctcgccaatgtggaaggattatcagtcctccgttca
ttccgactgctccgagtcttcaagttggcaaaatcctggcccacgctgaatatgctgata
aagatcatcggcaattctgtgggggctctgggaaacctcaccctggtgttggccatcatc
gtcttcatttttgctgtggtcggcatgcagctctttggcaaaagttacaaagattgtgtc
tgcaaaatcgccagtgactgcacgctcccgcgctggcacatgaatgacttcttccactcc
tttctgattgtattccgtgtgctttgtggagagtggatagagaccatgtgggactgcatg
gaggtcgctggccaagctatgtgccttactgtcttcatgatggttatggtgattgggaac
cttgtggtcctgaacctctttctagccttgcttctgagttcattcagtgcagacaacctt
gcagccactgatgatgacaatgaaatgaacaatcttcagattgctgtggacaggatgcac
aagggaatagcttatgtaaagagaaaaatctatgagtttattcagcaatcttttgttagg
aaacaaaagatcttagatgaaattaaaccacttgatgatctaaacaacagaaaagaaaat
tgtatgtccaaccacacaacagaaattgggaaagatcttgactatcttaaagatgtaaat
ggaaccacaagtggcataggaacaggcagcagcgttgaaaagtacatcatcgatgagagt
gattacatgtcattcataaacaatcccagtctcacggtgactgtaccaattgctgtggga
gagtctgactttgaaaacttaaacacagaagactttagcagtgaatcagatctagaagaa
agcaaagagaaacttaatgaaagcagtagttcttcagaaggtagcactgtggacattggg
gcacctgcagaagaacagcctgtcatggagcctgaagaaactcttgaacctgaagcctgt
ttcactgaaggctgtgtacaaagattcaagtgctgtcaaatcagtgtggaagaagggaga
ggaaagcagtggtggaacctgagaagaacatgcttccgaatagtggagcataactggttt
gagaccttcattgttttcatgattctcctgagtagtggtgcactggcatttgaagatata
tatattgaccagcgaaagacaattaaaacaatgcttgaatatgctgacaaggtttttact
tacattttcattctggaaatgcttctcaaatgggtggcatatggctatcaaacatatttt
accaatgcatggtgttggctggatttcttaattgttgatgtttcattggtcagtttaaca
gcaaatgccttgggttactctgaacttggggccatcaaatccctcaggacactaagagct
ctgagaccactaagagccttatcacggtttgaagggatgagggtggttgtgaatgccctt
ttaggagcaattccatccatcatgaatgtgcttctggtttgtcttatattctggctaatt
ttcagcatcatgggcgtaaatttgtttgctggcaaattctaccactgtgttaataccaca
actggtgacatgtttgagatcagcgaagtgaataatcattctgattgcctaaaactaata
gagagaaatgagactgcccgatggaaaaatgtgaaagtaaactttgataatgtaggattt
gggtatctctctttgcttcaagttgccacatttaagggatggatggacataatgtatgca
gcagttgattccagaaatgtggaactccagcctaagtatgaggaaagcctgtacatgtac
ctctactttgtcatctttatcatcttcgggtccttctttaccttgaacctgtttattggt
gtcatcatagataatttcaaccaacagaagaaaaagtttggaggtcaagacatctttatg
acagaagaacagaagaaatattataatgcaatgaaaaagttaggatcaaaaaagccacaa
aagcctataccacgaccaggaaataaatttcaagggatggtctttgattttgtaaccaga
caagtttttgacatcagtatcatgatcctcatctgtcttaacatggttacaatgatggtg
gaaactgatgaccagagtgaatatgtgactagtgttttgtcacgcatcaacctggtgttc
attgtgctgttcacgggcgagtgtgtgctcaagctcatctccctccgtcattactatttc
accattggatggaacatttttgattttgtggtagtcattctctccattgtaggaatgttt
cttgctgagctgatagagaagtattttgtgtcccctaccctcttccgtgtgatccgcctg
gccaggattggccgaatcctccgtctgatcaaaggtgccaaggggatccgcacgctgctc
tttgctctgatgatgtcacttcctgctctgtttaacatcggcctcctgctcttcctggtc
atgttcatctacgccatctttggaatgtccaattttgcctatgttaagagggaagttgga
attgatgacatgttcaattttgagacctttggcaacagcatgatctgcctgttccaaatc
accacctctgcgggctgggatggactcctagctcctatactcaatagtggacctcctgac
tgtgaccctgaaaaagaccaccccggaagttcagtgaagggggactgtgggaacccatcc
gtcgggattttcttctttgtcagctacatcatcatctccttcctggttgtggtgaacatg
tacatcgccgtcatcctggagaacttcagcgttgccactgaagagagtgcagagcccctg
agcgaggatgactttgagatgttctacgaagtctgggagaagttcgaccctgacgccact
cagttcatggaatttgaaaaattatctcagtttgcagctgctcttgaaccccctctcaat
ttgccgcaaccaaacaaacttcagctcatcgccatggatctgcccatggtgagtggagac
cggatccactgcctggacatcttatttgcttttacaaagcgggttttgggtgagagtgga
gagatggatgccctccgcatacagatggaagagcggttcatggcttccaatccttccaaa
gtctcctatcagccgatcactactactttgaaaagaaaacaagaggaggtgtcagctgtt
atcattcagcgggcttataggcgccaccttttgaagagaactgtgaaacaagcttcgttc
acatataataagaacaaactcaaaggtggggctaatcttgtaaaagaagacatgatcatt
gacagaataaatgaaaactctattacagagaaaactgacctgaccatgtccactgcagcc
tgtccaccctcgtatgatcgggtgacaaagccaattgtggaaaaacatgaacaagaagga
aaagatgaaaaagccaaagggaagtga
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