Nannospalax galili (Upper Galilee mountains blind mole rat): 103732372
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Entry
103732372 CDS
T03372
Symbol
Ddx41
Name
(RefSeq) DEAD-box helicase 41
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
103732372 (Ddx41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngi03041
]
103732372 (Ddx41)
Enzymes [BR:
ngi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103732372 (Ddx41)
Spliceosome [BR:
ngi03041
]
Complex C
Other components
Complex C specific factors
103732372 (Ddx41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
ResIII
Utp25_C
ERCC3_RAD25_C
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
103732372
NCBI-ProteinID:
XP_008829171
UniProt:
A0A8C6WC96
LinkDB
All DBs
Position
Un
AA seq
622 aa
AA seq
DB search
MEESEPERKRARADEATVGGSRSDDEHEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGAAE
EEQQDSGSEPRGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESV
AEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPI
KSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI
MFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGG
MSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRT
IFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAK
MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRE
GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC
DESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEA
MQTKQVSNIGRKDYLAHSSMDF
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtcggaacccgagcggaagcgggcacgcgcggatgaggcgactgtgggaggc
agccgctccgacgatgagcatgaggacgacgaggactacgtgccctatgtgccattgcgg
cagcgccggcagctactgctccagaagctgctgcagcgaagacgcaagggagccgcggag
gaagagcagcaggacagtggcagtgagccccgaggagatgaggacgacatcccgctgggc
ccgcagtccaacgtcagtctcctggatcagcaccagcacctcaaagagaaggctgaagct
cgaaaagagtctgcgaaggaaaaacaactgaaggaagaagagaagatcctagagagtgtg
gctgaaggccgagccttgatgtcagtgaaggaaatggccaagggcatcacatatgatgat
ccaatcaaaaccagttggactcccccacgttatgtcctgagcatgtctgaagaacgacat
gagcgtgtccgaaagaagtaccacatcctggtagaaggagatggtatcccaccacccatc
aagagcttcaaggaaatgaaatttcctgcagccatcctacgaggactgaaaaaaaagggt
atcctccacccaacacccattcagatccagggcatccctaccattctctccggtcgggat
atgatcggcattgccttcacaggatcaggcaagacactggtgtttacactgcctgtcatc
atgttctgcctggaacaggagaagcggttgcctttctccaagcgtgaagggccctatgga
ctcatcatctgcccttcgcgagagctggcccgacaaacccatggcatcctggagtattac
tgccgtctgctgcaggaggacagttcgcctctcctgcgctgtgctctctgtattgggggc
atgtctgtcaaagaacagatggagaccatccgacatggtgtgcacatgatggtagccacc
cctggacgccttatggatttactgcagaagaaaatggtcagcctggacatctgtcgctac
ctggctctggatgaggctgaccgcatgatcgacatgggtttcgagggagacatccgaacc
atcttctcctacttcaagggccagcggcagactctgctcttcagtgctaccatgccaaag
aagattcagaactttgctaagagtgccctggtaaagcctgtcaccatcaacgtaggtcgt
gctggagctgccagcttggatgtcatccaggaggtggaatacgtgaaagaggaagccaag
atggtgtacctgcttgagtgcttgcagaagacacctccacctgtgcttatctttgcagag
aaaaaagcagatgtggatgccattcacgaatacctcctgctcaagggagttgaggctgtg
gccattcatgggggcaaagaccaggaggaacggaccaaggccattgaggcattccgagaa
ggcaagaaggatgtcctagtggccacagatgtggcttccaaaggcctagatttccctgcc
atccagcatgtcatcaattatgacatgcctgaagaaattgagaactacgtgcatcgaatt
ggccgcactgggcgttcaggaaacacaggcatcgctaccaccttcatcaataaagcctgt
gatgagtcagtgctcatggacctcaaggccttgctgctggaagccaagcagaaggtgcca
cctgtgctgcaagtgctgcactgtggggatgaatccatgctggatatcggaggagaacgt
ggctgtgccttctgtgggggtctgggccatcggatcactgactgccccaaacttgaggct
atgcagaccaagcaagtcagcaacattggccgcaaggactacctggcccacagctccatg
gacttctga
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