Nannospalax galili (Upper Galilee mountains blind mole rat): 103732629
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Entry
103732629 CDS
T03372
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103732629
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
Motif
Other DBs
NCBI-GeneID:
103732629
NCBI-ProteinID:
XP_008829468
LinkDB
All DBs
Position
Un
AA seq
746 aa
AA seq
DB search
MMAVPPSPLHLLGILLTISLSSIRFIQAGAYYGIKPLPPQIPPQIPPQIPQYQPLGQQVP
HIPLGKDGLAMGKELPHMQYGKEYPHLPQYMKEIQPVPRMGKEVVPKKGKAEIPLANLRG
EQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAK
GEIGPKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGAKGDRGPTGPPGPPGLQG
PKGEKGFGMPGLPGLKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGPPGEPGPQ
GPIGVPGVQGPPGMPGVGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGP
KGDRGVGGVPGALGPRGEKGPVGAPGLGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGV
VGPQGPQGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGHKGLPGLPGVPGL
LGPKGEPGIPGDQGLQGPRGIPGIAGPSGPIGPPGIPGPKGEPGLPGPPGFPGVGKPGIA
GLHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPP
HGYAGKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFDKLLYNGRQNYNPQTGIFTCEVP
GVYYFAYHVHCKGGNVWVALFKNNEPMMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQM
PSEQAAGLYAGQYVHSSFSGYLLYPM
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgtgccacccagtcctctgcatctgctgggaatactgctcaccatttccctg
agctccatcaggttcattcaggcgggtgcctattatggaatcaagccgttgccgcctcaa
attcctcctcagataccaccacaaattccacaataccagcccctgggccagcaagtacct
cacattcctttgggcaaagatggccttgccatgggcaaggagctgccccacatgcagtat
ggcaaagagtatccacacctaccccaatatatgaaggaaattcaacctgtgccaagaatg
ggcaaggaagtggtacccaagaaaggcaaagcagaaatacccttagccaatttgcgagga
gaacaaggtccccgtggagaacctggcccaagaggaccacctgggccaccaggtttgcca
ggtcatggaatacctggaatcaaaggaaaaccagggccacagggatatccaggagttgga
aagccaggtatgcctggaatgcctgggaagccaggagccatgggaatgcctggggcaaaa
ggcgaaattggaccgaaaggggaaattgggcctatggggattccaggaccacaaggacct
ccagggcctcatggacttcctggcattgggaagccaggtgggccagggttgccagggcaa
ccaggagcaaagggtgatagaggacccacaggaccaccaggacctccaggccttcagggt
cctaaaggagagaagggtttcgggatgccaggtttgccaggtctgaagggtcccccaggt
atgcatggtccacctggcccagttggactgccaggagttggaaaaccaggagtgacaggc
tttcctgggccccagggtccgctggggaagccagggcccccaggagaacctggcccacaa
ggccccattggagtaccaggagttcaaggacctcctgggatgccgggagttggaaagcca
ggccaggatgggatccctggccagccaggatttccaggtggcaaaggagaacaaggacta
ccagggttgcctggacccccaggtctcccagggatcggaaagccaggcttcccaggaccc
aaaggagaccggggtgtagggggtgttcctggggctcttgggccaagaggggaaaaagga
ccagtaggtgcccctggactggggggtccccctggagagccaggcctgcctggaatccca
ggtcccatgggccctccaggtgctattggttttcctggtcccaaaggagaaggtggggtt
gtggggccacagggcccacagggtcccaagggtgagccaggactccaaggcttcccagga
aaaccgggttttcttggtgaagtgggcccccctggtatgagaggtctgccaggtcccata
gggcccaagggggaagctggccacaaagggctgccagggctccctggtgtaccggggctg
cttggacccaagggagagccaggcataccaggggatcaaggtctacagggaccccgaggt
atccccgggattgcaggccctagtggacccattggaccacctgggattccaggacccaaa
ggagagccgggccttccagggccccctggattccctggtgtagggaagccaggaatagca
ggacttcatggtcccccagggaagcctggtgcccttgggcctcaaggccagcctggtctt
cctgggcccccaggccctccagggcccccaggaccccctgctgtgatgccccctacacca
ccgccccagggagagtatctgccagatatggggctaggaattgacggtgtgaaacctcca
catggctacgcgggcaagaagggcaagaacggagggccagcctatgagatgccagcattt
actgccgagctgacagcacctttcccacctgtgggggccccagtgaagttcgacaagctt
ctatacaacggcagacagaactacaaccctcagacaggcatcttcacatgtgaagtccct
ggtgtctactactttgcataccacgttcactgcaaggggggcaacgtgtgggttgcactg
ttcaagaacaacgagcccatgatgtacacgtacgatgagtacaaaaagggctttctggac
caggcatctgggagtgccgtgctgctgctccggcccggagaccgggtgttcctccaaatg
ccctcagaacaggctgcgggactgtatgctggacaatatgtccactcttctttttcagga
tatttattatatcccatgtag
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