Nannospalax galili (Upper Galilee mountains blind mole rat): 103732865
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Entry
103732865 CDS
T03372
Symbol
Pdzrn3
Name
(RefSeq) PDZ domain containing ring finger 3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngi04121
]
103732865 (Pdzrn3)
Enzymes [BR:
ngi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103732865 (Pdzrn3)
Ubiquitin system [BR:
ngi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
103732865 (Pdzrn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
Sina_ZnF
zf-C3HC4_3
zf-TRAF
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
zf-rbx1
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
103732865
NCBI-ProteinID:
XP_008829806
UniProt:
A0A8C6RZU5
LinkDB
All DBs
Position
Un
AA seq
1062 aa
AA seq
DB search
MGFELDRFDGEVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCGRVVKLQELPEHLERCDFAPARCRHAGCGQL
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCSRSLRAHNGALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAEPPGG
KGEETKNLTLVLHRDSGSLGFNIIGGRPCVDNQDGSSSEGIFVSKIVDSGPAAKEGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPASESQLVDTGTQT
DITFEHIMALTKMSSPSPPVLDPYLLPEEHPSSHEYYDPNDYMGDIHQDMDREELELEEV
DLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
SVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGEDATASSNPL
AGQRKLTCSQDTLGSGDLPFSNESFISADCTDVDYLGIPVDECERFRELLELKCQVQSSN
PYSLYYPNSPLDAGKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLKEQYRESWM
LHHSGFRNYNTSVDVRRHDLSDITELPEKSDKDSSSAYNTGESCRSTPLTLEMSPDNSLR
RVAEGSSEGATASTEAYRPSPKNLLAIMEDPEVGNPNYSPSTKELDPSQALESKERGASD
GSRSPTASPKLGSAYLPSYQHSPYKHAHIPAHAQHYQSYMHLIQQKSAVEYAQSQMSLVS
MCKDLNSSSSAEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMTTDDDAI
SEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCLKEQQAADDRKEMNILELSHKK
MMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctagaccgcttcgacggcgaggtggacccggatctgaaatgcgcgctg
tgccacaaggtcctggaggacccgctcaccaccccgtgcggccacgtcttctgcgccggc
tgtgtgctgccctgggtggtgcaggagggcagctgccccgcgcggtgtcgcggtcgcctg
tcggccaaggagctcaaccacgtcctgccgctcaagcgcctcatcctcaagctggacatc
aagtgtgcgcacgcggcgcggggctgcggccgggtagtcaagctgcaggagctgcccgag
catctggagcgctgcgacttcgcgcccgcgcgctgtcgccacgcgggctgcggccagctg
ctgctgcggcgcgacgtggaggcccacatgcgcgatgcgtgcgacgcacgaccggtgggc
cgctgccaggagggttgcgggctgccgctgacccacggcgagcagcgcgcgggcggccac
tgttgctcgcgatcgctgcgggctcacaacggcgcgctgcaggcccgcctgggcgcgctg
cacaaggcgctcaagaaggaggcgctgcgagccggcaagcgcgagaagtcgctggtggcg
cagctggccgccgcgcagctcgaactgcagatgaccgctctgcgctaccagaagaagttc
accgaatacagcgcgcgcctcgactcgctcagccgctgcgtggccgagccgcccggcggc
aagggtgaagaaaccaaaaacctaactctggtccttcatcgggactctggttccctggga
ttcaatatcatcggtggccggccctgtgtggacaatcaagatggatcgtccagtgaagga
atctttgtatccaaaatagttgacagtgggcctgcagccaaggaaggaggcttgcaaatt
catgacaggattattgaggtcaatggcaaagacttatcccgagcaactcatgaccaggct
gtggaagcgttcaagacagccaaggaacccattgtggtacaggtgttgaggaggactcct
cgaaccaaaatgttcacacctgcttcagagtcacagcttgtggacacaggaacccaaacc
gacatcacctttgaacacatcatggccctcacaaagatgtcctctcccagcccacctgtg
ctggatccctacctgctgcctgaagagcacccctcatcccacgaatactatgatccgaat
gactacatgggggacatccatcaggacatggacagggaggagctggagctggaggaagtg
gacctgtacagaatgaacagccaggacaagctgggcctcactgtgtgttaccggacagat
gacgaagatgacattgggatttatataagtgagattgaccctaacagcattgcagccaag
gatgggcgcattcgagaaggggaccgcatcatccagattaatgggatagaagtacagaac
cgtgaggaggccgtggctcttttgaccagtgaagaaaataagaacttttcattgctgatt
gcaaggcctgagctccagctggatgagggctggatggacgatgacaggaatgactttttg
gatgacctgcacatggatatgctggaggagcagcaccaccaagccatgcagttcacagcc
agcgtgctccagcagaagaagcatgaggaagatggtgggacaacagacacggccaccatc
ctatccaaccagcatgagaaagacagcggcgtggggcggacggatgagagcacccgcaac
gacgagagctcagagcaggagaacaatggagaagacgccactgcgtcctccaacccgctg
gcgggccagaggaagcttacctgcagccaggacaccctgggcagtggtgacctgcccttc
agcaatgagtcctttatctctgcagactgcaccgatgtggattacctgggcatcccagtg
gatgagtgcgagcgcttccgcgagctactggagctcaagtgccaggtgcagagcagcaat
ccctacagcctgtactaccccaacagcccactggacgccggcaagagcgaccctgagagc
gtggacaaagagctggagctgctcaatgaggaactgcgcagcatcgagctggagtgcctg
agcatcgtgcgcgcgcacaagatgcagcagctcaaggagcagtaccgggagtcctggatg
ctgcaccacagcggcttccgcaactacaacaccagcgtggacgtgcgccgccatgatctc
tcagacatcaccgagctgcccgagaagtcagacaaggatagctcgagtgcctacaacact
ggagagagctgccggagcaccccgctcaccctggagatgtccccggacaactccctgcgg
agggtggcagagggcagtagcgaaggggccaccgccagcaccgaagcttacaggccatcc
cccaagaatctgcttgccatcatggaggaccccgaagtgggcaacccaaactacagccct
tccaccaaagagctggaccccagccaggccctggagagcaaagaacgcggagccagtgat
ggcagccggagccccactgccagcccaaagctgggcagtgcctacctgccctcgtaccaa
cactctccctacaagcatgcgcacatccctgcacatgcacaacactaccagagctacatg
cacctgatccagcagaagtcagcggtggagtacgcacagagccagatgagcctggtgagc
atgtgcaaggacttgaactcttccagctccgcggagcccaggatggagtggaaggtgaag
atccgcagcgatgggacgcgctacatcaccaagaggcctgtgcgggacagactgctgcgg
gagcgtgcactgaagatccgggaggagcgcagtggcatgaccacagatgacgacgccata
agtgagatgaagatggggcgctattggagcaaggaggagcgcaaacagcatctggtgaag
gccaaggagcagaggcggaggcgcgagttcatgatgcagagcaggctggattgtctgaag
gagcagcaagcggccgacgacagaaaggagatgaacatcctggaactgagccacaaaaag
atgatgaagaagaggaacaaaaaaatctttgacaattggatgaccatccaagaactctta
acccatggcacaaaatctccagacggcactagggtatacaattccttcctgtcagtgacc
actgtataa
DBGET
integrated database retrieval system
