Nannospalax galili (Upper Galilee mountains blind mole rat): 103733668
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Entry
103733668 CDS
T03372
Symbol
Apex1
Name
(RefSeq) apurinic/apyrimidinic endodeoxyribonuclease 1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103733668 (Apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngi03400
]
103733668 (Apex1)
Enzymes [BR:
ngi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
103733668 (Apex1)
DNA repair and recombination proteins [BR:
ngi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
103733668 (Apex1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
103733668
NCBI-ProteinID:
XP_008830780
LinkDB
All DBs
Position
Un
AA seq
355 aa
AA seq
DB search
MRACCSLDRAAGPGGNVVKTLLRFAAWSRRRTSFVTGMPKRGKKRVAAEDGEEPQREPET
KKSKVGAKKNEKEATGDGAVLYEDPPDQKTSPSGKSATIKICSWNVDGLRAWIKKKGLDW
VKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSAPSDKEGYSGVGLLSRQCPLKVS
YGIGEEEHDQEGRVIVAEFESFVLVTAYVPNAGRGLVRLEYRQSWDEAFRKFLKGLASRK
PLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQEVPLADSFRHLYPNTAYA
YTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcatgctgcagtttggaccgcgcggcggggccgggaggcaacgtagtaaaaacg
ctacttcggttcgcggcgtggtccaggcgccggacgtctttcgtcacagggatgccaaag
cgtgggaaaaagagagtggcggccgaagacggggaagagccccagcgggagccagagacc
aagaagagtaaggtgggagcaaagaaaaacgagaaagaggcgacaggagacggcgcagtt
ctgtatgaggaccctccagatcagaaaacctcgcccagtggcaaatccgctacaatcaag
atatgctcctggaatgtggacgggcttcgagcctggattaagaagaaaggtttagattgg
gtgaaggaagaagccccagatatcctgtgcctccaagagacgaaatgttcagaaaacaaa
ctaccagctgaacttcaagagctgcctggactttctcatcagtactggtcagctccctcc
gacaaagaaggatatagtggtgtgggtctactttcccgccagtgcccactcaaagtgtcc
tatggcattggtgaggaagaacatgatcaagaaggccgggtgattgtggctgaatttgag
tcatttgtgctggtcacagcctatgtacctaatgcaggccgtggtctggtgagactggag
taccggcagagctgggatgaagccttcagaaagtttctgaagggcttggcttcccgtaag
ccccttgtgctatgtggggacctcaatgtggctcatgaagaaattgatcttcgtaacccc
aaaggaaacaaaaagaacgctggcttcactccccaagagcggcaaggtttcggtgaattg
ctgcaagaggtaccactggccgacagctttcggcacctctaccccaacactgcctatgct
tacactttttggacttacatgatgaatgctaggtctaagaatgttggctggcgccttgat
tacttcctgctgtcccactctctcctacctgcattgtgtgacagcaagatccgttccaag
gctcttggcagtgatcactgtcccatcaccctgtatctagcactgtga
DBGET
integrated database retrieval system
