Nannospalax galili (Upper Galilee mountains blind mole rat): 103733794
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Entry
103733794 CDS
T03372
Symbol
Pcdh9
Name
(RefSeq) protocadherin 9
KO
K16498
protocadherin delta 1
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
103733794 (Pcdh9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ngi01009
]
103733794 (Pcdh9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngi04515
]
103733794 (Pcdh9)
Protein phosphatases and associated proteins [BR:
ngi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103733794 (Pcdh9)
Cell adhesion molecules [BR:
ngi04515
]
Cadherins
Protocadherins
103733794 (Pcdh9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Big_9
MAP17
RCR
V_ATPase_I
EphA2_TM
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
103733794
NCBI-ProteinID:
XP_008830896
UniProt:
A0A8C6QG26
LinkDB
All DBs
Position
Un
AA seq
1237 aa
AA seq
DB search
MDLRDFYLLAALVACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFNREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDED
AGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAK
VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKALHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQCNSHSKSD
NIPVTPQKCPSSASFHIQENEESHYESQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLI
SHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSD
NCWMPPGLGPYQHPKSPLSTFAPQKEWVKKDKLVNGHTLTRAWKEDSNRNQFNDRKQYGS
NEGHFNNGSHMTDIPLANLKSYKQAGGGIESPKEHQL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctggttgcctgtttaaggctggattct
gcaatagctcaagaacttatttacactattagagaggaattgcctgaaaatgtgcccata
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacggggaccagtgcc
agccttgtctacagactggtttctaaagctggggatgcccctttggtgaaagtatccagc
agcactggagaaattttcacaacctccaatagaatagacagagagaaactctgtgctgga
gcttcttatgctgaggagaatgagtgtttctttgaacttgaggtggtgatcctccccaat
gactttttcaggctgatcaaaatcaagatcattgtcaaggataccaatgacaatgcccca
atgtttccttctcctgtcatcaatatttccattccagaaaacactttgatcaacagccgc
tttccaatcccttcagccacagatcctgacacaggtttcaatggggtgcagcattatgaa
ttgctaaatgggcagagtgtttttggactggatattgtggaaactccagagggagagaag
tggccacaattgattgttcagcagaacttggatagagaacaaaaagatacctatgtgatg
aaaatcaaagtggaggatggaggcactccacagaaatccagcacggccatactgcaggtc
accgtaagtgatgtgaatgacaacaggccagtgtttaaagagggtcaagtggaggtgcat
attccagagaatgctcctgtggggacctctgtcatacagctccatgctactgatgcagat
ataggcagtaatgctgaaatccgatacatttttggtgcccaggttgcccctgcaaccaaa
agactctttgctttaaataacactactggtctgattacagttcagaggtccttagataga
gaagagacagccattcacaaagtgacagtgctggcaagtgacggcagctccactcctgcc
cgagccacagttaccatcaatgtcactgatgtaaatgataacccaccgaacatagacctc
aggtacattataagtcccatcaatggaacagtgtacttatctgagaaagatcctgtcaat
acaaagatcgccctaattacagtttcagataaggacacagatgtgaatggcaaagtgatc
tgttttattgaaagagaggtcccatttcatctgaaggcagtatatgacaaccagtatctg
ctggagacctcttctctgctggactatgagggcaccaaagaattcagctttaaaattgtt
gcctctgattctgggaagcccagtttaaatcagactgccctggtaagggttaagcttgag
gatgaaaatgacaacccaccaattttcaaccagcctgtaattgagctgtcagtttctgaa
aacaaccgacgtgggttatacttaaccactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggaccgaatgcctccttctttgatctggaccgaaag
acaggagttttgacagcctccagagtctttaacagagaggaacaagaacgattcattttt
acagtaactgccagggacaatgggacccctcccctccaaagccaagcggcagtgatagtt
actgttctggatgagaatgacaatagccccaagtttactcataatcattttcagtttttt
gtgtctgagaatctgccaaagtatagtactgtgggtgtaatcacagtgacagatgaggat
gctggagagaataaagctgtgactctttccattcttaacgacaatgataattttgtgttg
gatccctattctggagtcataaagtcaaatgtctcctttgatcgagagcaacagagttcc
tacacttttgatgtcaaagccactgatggagggcagccacctcgttcctctactgcaaaa
gtaactatcaatgtcatggatgtcaatgacaatagcccagttgtcatttctccaccatcc
aacacctcatttaagttggtgcccctctcagccattcctggttcagtggtggctgaagtt
tttgcagtggatattgacactggaatgaacgcagaacttaagtataccatagtgagtggg
aacaacaaaggattatttcgaattgatccagtgactggcaacatcactttggaagaaaag
ccagcacctactgatgtgggtctccaccgcctggtggtcaacataagtgacctgggatac
cctaaagctttgcacactctcgtgcttgtatttctttatgtgaatgacactgctggaaat
gcctcctatatctatgacttgatccgcaggactatggagaccccattggacaggaacata
ggtgatagtagccaaccgtatcagaacgaggactatctcaccatcatgattgccattgtt
gcaggggccatggtggtcatagttgtgatctttgtcacagttctggtgcgctgtcgccat
gcgtcaaggttcaaagcagctcagaggagcaaacaaggtgctgagtggatgtccccaaac
caggagaacaaacaaaacaagaaaaagaaaaggaagaaaagaaagtctcccaagagttct
cttttgaactttgtgactattgaagagtccaaacctgatgatgcagttcacgaacctatc
aatgggaccataagcctgcctgctgagctggaggaacaaagtataggaagatttgactgg
ggcccagcacctccgacaaccttcaagcctaacagccctgacctggccaagcactacaaa
tctgcctctccgcagcctgcttttcatctcaaaccagacactccagtttctgtgaaaaag
caccatgtgattcaggagctccctttggacaacacctttgttgggggctgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagctcccaagga
ggcttcaagacaaagggccccttacacaccagacagtgtaactcacacagcaaaagtgac
aatattcctgtcactcctcagaaatgtcccagctctgcgagtttccacattcaggagaat
gaagaaagccattatgagtcgcagcgccgtgttacctttcacctcccggatggctcccag
gaaagctgcagtgacagtggtctgggagaccacgagccggtgggtagtggaaccctgatc
tcacaccctcttcctctggttcagccacaggacgaattctacgaccaggcctctccggac
aagaggaccgaagcagatggcaactcggaccccaactctgatggaccactaggtccccga
ggattagctgaagctacagagatgtgcactcaagagtgcctggttctgggtcactctgat
aattgctggatgcctcctggcttgggtccatatcagcaccccaaatctcctctctcaaca
tttgcaccccagaaagaatgggtcaagaaagacaagctcgtgaatgggcacaccctgaca
agagcttggaaggaagacagcaacaggaaccagttcaatgaccgtaagcagtatggttcc
aatgaaggccacttcaacaatgggagccacatgacagacattcctctggcaaatctgaag
tcctataagcaagcaggaggtggaattgagagtcctaaggagcaccaactttaa
DBGET
integrated database retrieval system
