Nannospalax galili (Upper Galilee mountains blind mole rat): 103734339
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Entry
103734339 CDS
T03372
Symbol
Rfc1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03030
DNA replication
ngi03410
Base excision repair
ngi03420
Nucleotide excision repair
ngi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103734339 (Rfc1)
03410 Base excision repair
103734339 (Rfc1)
03420 Nucleotide excision repair
103734339 (Rfc1)
03430 Mismatch repair
103734339 (Rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngi03032
]
103734339 (Rfc1)
03400 DNA repair and recombination proteins [BR:
ngi03400
]
103734339 (Rfc1)
DNA replication proteins [BR:
ngi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103734339 (Rfc1)
DNA repair and recombination proteins [BR:
ngi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103734339 (Rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
BRCT_2
RuvB_N
AAA_14
Rad17
AAA_5
AAA_22
AAA_7
AAA_16
AAA_33
AAA_30
nSTAND3
AAA_17
Zeta_toxin
AAA_18
RNA_helicase
NTPase_1
NPHP3_N
AAA_19
AAA_28
Motif
Other DBs
NCBI-GeneID:
103734339
NCBI-ProteinID:
XP_008831454
LinkDB
All DBs
Position
Un
AA seq
1145 aa
AA seq
DB search
MDIRKFFGVIPSGKKPVNETVKKNDKTKSAEDTVRGKKGIKEIKVNSSCKEDASKQKQPN
KKKRIIYDSDSESEETIQVKHAKKSSEKLSLSSKPGKISQKDPVTYISETDEDDDFVYKK
ATSKPKENGVSTNSHLEASSMKRNEESTRTKNKPLSPIKLTPTSVLDYFGTGSVQRSGKK
MVASRRKEPSQKAEDSRLNDEAIAKQLQLDEDEELERQLHEDEEFARTLAMLDEEPKTKK
VRKDTEEGETFSSVPADLSKAEKYKSPNKEQFLNERKIYSPNKQTKCGSSKESQQHSRSS
AHQVQVCSSPKASSKLALMKAKEERSNKETEPVASKRKESAIEPKEKKTPKKTKSSPVKK
ESVSPEDAEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIERE
EAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIVDEDGLLNLIRTMPG
KKSKYEIAVEAEMKKEKSKLERTPKKNDQGKRKISSTKKESESKKSKLMPRRDSPAKAAK
KETKEADMFRRGLDFKEQVATETNGDSRAGGSAEGGSENRVESLLWVDKYKPTSLKNIIG
QQGDQSCANKLLRWLQNWHSSSPEEKKQAKFGKFASKDDGSSFKAALLSGPPGVGKTTTA
SLVCQELGYSYVELNASDTRSKNSLKAIIAESLNNTSIKGFYTGGATSVSTKHALIMDEV
DGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKS
AMLSVAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARNKALTYDQAKADSQRARK
DIKLGPFDVARKVFAAGEETGHMSLMDKSDLFFHDYSIAPLFVQENYLHVKPVAAGGDMK
KHLMLLSRAADSICDGDLVDSQIRSKQNWTLLPTQAIYASVLPGELMRGYMTQFPTFPSW
LGKHSSMGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSHIRDALVQPLTSQGVEGVQHVV
ALMNTYYLMKEDFESIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLQIIKT
SRPSTGPALDSEYNEELQEDDSQYEKEQDAIETDAMIKKKTKSSKPSKPEKAKESKKGKG
KSWKK
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggacattcggaaattctttggcgttataccaagtggaaaaaaacctgtaaatgaaaca
gtaaagaagaatgacaaaacaaaatctgcagaggacactgtcagaggaaagaaaggaata
aaggagatcaaggtaaatagctcctgtaaagaggatgcctccaaacaaaagcaaccaaac
aagaagaagagaatcatctatgattcagattcagaatcagaggagacaatacaggtaaaa
catgctaaaaagtcatcagaaaaattgtcattgtcttctaaacctgggaaaatttcacag
aaggaccctgttacatacatatctgagacagatgaagatgatgactttgtgtataaaaaa
gcaacctccaaaccaaaagagaatggagtatctacaaatagtcaccttgaagcatcaagc
atgaaaaggaatgaagaaagcactagaactaagaataaacctttatcaccaataaaactt
acaccaacatcagtgcttgattattttggaactggaagtgtccaaagatctgggaagaag
atggtggcaagtagaagaaaagagccttctcaaaaagcagaggattccagattaaatgat
gaagccattgccaagcagttgcagcttgatgaagatgaagagctggagaggcagttgcat
gaagacgaagagtttgccagaacattagccatgttggatgaagaaccaaagaccaaaaaa
gtccgaaaagacaccgaagagggagaaacgttttcatctgtcccagctgatttaagtaaa
gcagaaaaatataaaagccccaataaagaacagtttttaaatgaaagaaagatctatagt
cctaataagcaaactaagtgtggaagctcaaaagaatctcagcagcattccagatcttca
gctcatcaagtacaagtgtgttcttctccaaaggccagttccaagctggcacttatgaaa
gcgaaagaagagaggtctaacaaagaaactgagccagtggcctcgaaaagaaaagaaagt
gccattgaaccgaaggagaaaaaaactcctaagaaaaccaaaagttctccagttaaaaaa
gagtctgtaagtccagaagatgctgaaaagaaacgcactaattatcaagcttatcgaagc
tacttaaatcgagaaggtcccaaagctctgggctccaaagaaataccaaagggagctgaa
aattgcttggaaggtctgacatttgtgatcacaggagtgctggagtccattgaacgggaa
gaagccaagtctctaattgagcgttatgggggaaaagtaacaggaaatgtgagcaagaaa
acaaactacctcgtcatgggccgggacagcggacagtccaagagtgacaaggcagcagct
ttgggaacaaaaatagttgatgaagatggcctattgaatctgattcgaactatgccaggc
aagaaatcaaagtatgaaatagcagttgaagctgagatgaagaaagaaaaatccaaattg
gagcgaacacccaaaaaaaatgaccaaggaaaaagaaaaattagttcaaccaagaaagaa
tcagaatccaaaaagagcaagctgatgccccgaagagacagccctgcaaaggcagccaaa
aaggaaacaaaagaagccgacatgtttcgtaggggtctggacttcaaggagcaggtggcc
actgagacaaatggggacagcagggctgggggttcagctgaaggtggcagtgagaacaga
gtggaaagtttgctctgggtggataagtacaagcccacctcactcaagaacatcattggg
cagcaaggcgaccagagctgtgccaacaaactgctacgctggctccaaaactggcacagc
agttctcctgaagagaaaaaacaggcaaagtttggtaaatttgctagcaaagatgatggc
tctagttttaaggcagcattgctgtcaggccctccaggtgttggcaaaaccaccacagct
tctctggtgtgtcaggaattgggctacagctatgtggaactaaatgcaagtgacactcgg
agtaagaacagtttgaaggcaatcattgctgaatcactaaacaacaccagcatcaaaggc
ttttatacaggtggagcaacttctgtgagcacgaagcatgcgctcatcatggatgaggtt
gatggcatggcaggcaatgaggacaggggtggaattcaggaattaattggcctgataaaa
cataccaaaattcccattatttgtatgtgcaatgatagaaatcaccccaagattcgctct
ttggttcattattgttttgatcttcgtttccaaagacctcgggttgaacagattaagagt
gcaatgctgtctgttgcatttaaagagggcttaaagattccccctccagctatgaatgaa
ataattttgggagctaatcaagatatacgacaggttttacacaacctgagtatgtggtgt
gcacgaaataaggcactaacctatgaccaagccaaggctgattctcagagggccaggaag
gatatcaaactgggcccatttgatgttgcccggaaagtgtttgcagctggagaggagact
ggacatatgtcacttatggacaaatcggacctctttttccatgattattccatagcgcct
ctctttgtccaggagaactacctccatgtgaagcctgtggctgcagggggtgacatgaaa
aagcacttgatgcttttaagccgggcagcagatagcatatgtgatggtgacttagtggac
agccagatccggagtaagcaaaactggacccttctgcccacacaggccatttatgccagt
gttcttcctggagagttgatgaggggctacatgacccagtttcccacctttccaagctgg
ctcgggaagcactcatccatgggcaaacatgatcgcattgtacaggacctcgccttgcac
atgagtcttagaacctattcgagcaaaaggactgtgaacatggattacctgtcccatata
agagatgcacttgtacaacccttgacctcacagggggtggaaggagttcagcatgttgtt
gcacttatgaacacatactacttgatgaaagaagactttgagagtatcatggaaattagc
agctggggtggcaaacctagtcccttttccaagctggaccccaaggtgaaagcggctttc
acaagagcttacaacaaggaagcccacctcaccccatattcacttcagataataaagacg
tctagacctagcacaggcccagcattggattctgaatacaatgaagagttacaggaagat
gattcccagtatgagaaagagcaggatgcaatagaaactgatgccatgatcaagaaaaag
acaaaatcttcaaagccctcaaaaccagaaaaagctaaggagtccaaaaaaggaaaagga
aaaagttggaagaagtga
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integrated database retrieval system
