KEGG   Nannospalax galili (Upper Galilee mountains blind mole rat): 103734561
Entry
103734561         CDS       T03372                                 
Symbol
Prpf4
Name
(RefSeq) pre-mRNA processing factor 4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ngi  Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ngi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103734561 (Prpf4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ngi03041]
    103734561 (Prpf4)
Spliceosome [BR:ngi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    103734561 (Prpf4)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR3_2nd WD40_WDHD1_1st EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st PRP4 Beta-prop_WDR36-Utp21_1st Beta-prop_EML ANAPC4_WD40 NBCH_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_DCAF4 WD_LRWD1 WD40_like Beta-prop_RIG_2nd Ge1_WD40 WD40_RFWD3 Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 103734561
NCBI-ProteinID: XP_008831767
UniProt: A0A8C6Q9P6
LinkDB
Position
Un
AA seq 491 aa
MASSRASSTATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIE
AGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL
FGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWI
ANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSP
NSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAA
DGSVKLWSLDSYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRV
WDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNL
VTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCS
YDRTFKLWMAE
NT seq 1476 nt   +upstreamnt  +downstreamnt
atggcctcttcacgagcctcctccacggcaaccaaaactaaagcccctgatgatttagtt
gctcctgttgtgaagaaaccacacatctattatggaagcttggaagagaaggagagggaa
cgcctggccaaaggagagtctgggattttaggaaaagaaggacttaaagcaggaattgaa
gcgggaaatataaatataacctctggagaagtgtttgaaatcgaggagcacatcagtgag
cgacaggcagaggtcttggcagagtttgagagaaggaagcgagccaggcaaatcaacgtt
tccaccgatgactcggaggtcaaggcttgccttagggctttgggggagcccatcacactt
tttggagagggccctgctgaaagaagagaaaggttaaggaatatcctctcagtggttggt
actgacgccttaaaaaaaacaaagaaagatgatgagaaatctaagaagtccaaagaagag
tatcagcaaacctggtaccatgaaggacccaatagcctgaaggtggccagactctggatt
gctaattactcacttcccagggcaatgaagcgcttggaagaagcccgtctccataaagag
attcccgagacaactagaacctcccagatgcaagagctgcacaagtctctccggtctttg
aataatttctgcagtcagattggggatgatcggcctatctcctattgtcactttagtccc
aattccaaaatgctggccacagcttgttggagtggactttgcaagctctggtctgttcct
gattgtaacctccttcacactcttcgaggtcataacacaaacgtaggagcaattgtattc
catcccaagtccactgtctcattggaccaaaaagatgtcaacttggcctcttgtgctgct
gatggttctgtgaagctttggagtcttgacagctatgaccgttcatggcgcttatgggat
ttagaggctcaagaggagatcctgcatcaggaaggccacagcatgggtgtgtatgacatt
gccttccatcaagatggctctttggctggcactgggggactggatgcatttggccgggtt
tgggacctgcgtacaggacgctgcatcatgttcctagaaggccacctgaaggaaatctac
gggataaatttctcccctaatggctaccacattgcaactggaagtggtgacaacacctgc
aaagtgtgggaccttcgacagcgacgctgcgtctataccatccctgcccatcagaattta
gtgactggggtcaaatttgagcctatccatggaaacttcttactcactggtgcctatgat
aacacagccaagatctggacccacccaggctggtccccactgaagacactggctggacat
gagggcaaagtgatgggcctagacatctcttctgatggacaactcatagctacttgttca
tatgataggaccttcaagctctggatggcagagtag

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