Nannospalax galili (Upper Galilee mountains blind mole rat): 103734692
Help
Entry
103734692 CDS
T03372
Name
(RefSeq) protocadherin Fat 4-like
KO
K16669
protocadherin Fat 4
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04392
Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04392 Hippo signaling pathway - multiple species
103734692
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngi04515
]
103734692
Cell adhesion molecules [BR:
ngi04515
]
Cadherins
Cadherin related
103734692
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
EGF
Cadherin_2
EGF_CA
EGF_TEN
EGF_3
Fibulin_C
hEGF
Cadherin_4
cEGF
EGF_DL_JAG
EGF_2
Motif
Other DBs
NCBI-GeneID:
103734692
NCBI-ProteinID:
XP_008831970
LinkDB
All DBs
Position
Un
AA seq
1619 aa
AA seq
DB search
MCDTGDEKIIMLEDVMKTSKVLEGSESDGAGRHGEKLKQEEKVTWSRLQAGTRSRSYSLV
GGNSQFTINPSTAQIITSALLDRETKDNYTLVVVASDAGSPEPLSSSTSVCVTVTDVSDN
PPQFHHHPYVTHVPSPTLPGNSALRFPVFVVMVTDTDIGHNAELHYSLSCRNSDKFHIDL
LREVIMASGPLSGASQVTFSIQVKDGGSFPKTDSTTMTVRFDNKGDFPKVRAKEQTFMFL
ENQPVGTLVTTITGSSLRGETLSYYIASGNLGITLQIGPLTGQVSISQPLDFEKTQKYVV
WIEARDGGFPPFXSYEKLDITVLDTNDNAPTFKEDPFVAEVLENLSPXKILTVSAMDKDS
GPNGQLDYEIVSGNKENSFTINHATGEIRSIRPLDRGKITHYELTVKSSDKGSPSQSTSV
KVIINILDENDNAPRFSQIFSAYVPENSPLGYTVTRVTTSDEDIGINAVSRYSIVDASLT
FSINPNTGDIVISRPLNREDTDRYRIXVFAHDSGWTVSTDVTIFVTDINNNAPRFSRPSY
YLDCPELTEIGSKVTQVSATDPDEGSNGQVFYFIKYSEYFRINATTGEIFNKQVLKFQNV
SDLGNVNVNLHSFIVTSSDHGNPSLLSETTVTINKVDSNDNPPQFLKSKYFTPVTKNVKV
GTKLIKVTVVDDRDCGLNSEVEYFMSDGNHFKKFKLDSDTGWISIVSSLISDLNQNFLIT
ITAKDKGTPPLSSQATVHITVTDENYHTPEFSQSHVSATIPESHGIGAVVRSVSARDWDA
AMNGLIRYDISLGNEGGIFAINSSTGVLTLAKALDYELCQKHEVTISATDGGWVARTGYS
SVTVNVIDVNDNSPVFAPDEYFPTVLENAPSGTTIIYLNATYADSGANAVIVYSVQSSDS
DLFVIVPNTGVITTQGFLEFETKQSYHLTVKAXNVPVEERYSFTTVNIQLKGTNEYVPQF
VSXLHYFEVSEAAPEGTVIGELFASDRDMGTDGEVHCLLFGNSRXKGFQIHKKMGQIYVS
GLLVREKAERVSLKVLDKNFGSIQGADIDEVTVNITVLDANDPPVFSLNIYQVQISEGVP
TGTNVTFVGAFDSDSIPDWSTFSYFIGSGNENSAFSINPQTGQVTVTSELDRETLPVYNL
RVVAVDSGTPSATGSASLLVTLEDINDNGLVLTISDGEVLENKHPGTLVMTLQSTYPDLP
PNQGPFTYHLLSTRPATNYFSLNTAGVLSTARVLTGNREQINREQISDFXSVVTGDSGAP
QMSSTGTVHISVLDQNDNPSQSHTVEIFVNYYGSLFTGGTLGSVKPQDPDVLDSFHCSIT
SGVTSLFSIPVGSCDLNSQPRSTDGTFDLTALSSDGVHNAVTNTIRVFFFFFFLVWIILL
RIGVPTVKYFLTNHYLHFLLIAGSQLTGLGTTVQLYAAYEEGNRTFLLTAEKGNNNQYVN
SSGVATVFESIKEILLRQRGVKVQSVDHDPCIHSPCQNXGSCIRKLAVGSALKSQESLPV
IIAANEPLRPFQCKCASGYAGSWCESTSDECLPAPCHNGGTCHNLVGGFSCSCPDGFSGR
ACEREINECLPRPCKVGAVCQNFPGGFNCVCKTGYTGMVACSFLCSIRFLSKILDMESL
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacactggagatgaaaaaattataatgcttgaagatgtgatgaaaacatcaaag
gttctagaaggatcagaatccgacggggcagggaggcatggtgaaaaactgaagcaggag
gagaaggtaacgtggtcacgtcttcaagcaggtacaagaagcagaagttacagcctcgtg
ggtggaaattcgcagttcaccatcaacccatccacagctcagatcatcacaagtgcattg
cttgacagagaaaccaaagataattacactttggtagtggttgccagcgatgctgggtcc
ccagagcctctttccagttctaccagtgtgtgtgtcacagtgactgacgtcagtgataac
ccaccacagttccatcatcacccatatgtcactcatgtcccatcacctactcttccaggt
aattcagcactgaggttccctgtctttgtggtcatggtcacagacactgacattggacac
aatgctgagctccattattccctttcgtgcagaaactctgacaaatttcacatcgatctc
ctgagagaagtaatcatggcatctgggccactgagtggagcttctcaggtgacattttca
attcaggtgaaagatggtggctcatttccaaaaacggactccaccaccatgactgttaga
tttgacaacaaaggagattttcccaaagtcagagccaaagaacaaacattcatgtttcta
gaaaaccagccagtgggcactttggtcaccaccatcacagggtcctctttgagaggagaa
actttgtcatattatattgcaagtgggaacctgggcattactttgcaaattggtccatta
acaggacaggtgtccatcagtcagcctttggattttgaaaagacacaaaaatatgttgtg
tggattgaagccagagacgggggcttccctccctttntgtcttatgagaagcttgacatt
acagtgctggataccaatgacaatgccccgactttcaaagaagatccatttgtggctgaa
gtattagaaaacctatctccttgaaaaatacttactgtttcagcaatggacaaagacagt
gggccaaatggacagttagactatgagattgttagtggtaacaaagaaaatagtttcacc
atcaatcatgcaacaggtgagatcagaagcattcgcccactagacagaggaaaaataact
cattatgagctcactgtgaagtcttcagacaaagggtccccttctcagagcacctcagta
aaagtcatcatcaatattttagatgaaaatgataatgcaccaaggttttctcagatattc
agtgcctacgttcctgaaaattcccccttgggatatacggtcaccagggtcacaacttcc
gatgaagacattggcataaatgcagttagtagatactccatagtagatgcaagtctcaca
ttttcaattaaccccaacacaggagatattgtcattagtagacctttaaatagggaagat
acagatcgctacaggatctgagtttttgcccatgattctgggtggaccgtgagcacagat
gtcaccatattcgtgacggacatcaataacaatgccccaagattcagcagaccctcttat
tatttagattgccctgaacttactgagattggctccaaagtgactcaagtatcagctaca
gatcctgatgaagggtcaaatggacaggtgttttatttcatcaaatattcagaatatttc
agaatcaatgccaccactggtgagattttcaataagcaggtattaaaattccaaaatgtc
agtgatttgggtaatgtgaacgttaacctgcatagctttattgtgacctcttcagatcac
ggcaatccatccttactcagcgagaccacagttaccatcaacaaagtagatagcaatgat
aacccacctcagtttcttaaaagtaaatattttactccggtcaccaaaaatgtcaaagtt
ggcaccaagttaatcaaagtgactgtggtagatgacagagattgtggactgaactctgaa
gtggaatatttcatgtctgatgggaatcacttcaagaagtttaaattggacagtgataca
gggtggatttcaatagtatcttccttgatttctgacctgaatcaaaacttcctgatcaca
ataactgcaaaggataaaggcacccccccactttcttcccaagcaactgttcacataaca
gtcactgatgagaactaccatactcctgagttttctcagagccacgtgagtgccaccatc
cctgagagtcatggcattggggctgtggtcagaagtgtctctgccagggattgggatgca
gccatgaatgggttgattagatatgacatttctttaggaaatgaagggggcatctttgca
attaattcctctacaggtgtgttaacactagccaaagcccttgactatgagctatgccag
aaacatgaggtgacaatcagtgccacagatggaggatgggtcgcaaggacaggctactcc
agtgtgactgtgaacgtgattgatgtgaatgacaattctccagtgtttgctcctgatgaa
tatttccctactgttttagaaaatgcccctagtggaaccacaatcatttacttaaatgca
acatatgcagactctggagccaatgctgtcattgtgtacagtgtgcagtcatctgacagt
gacctgtttgtcattgtccccaacacaggggtcattaccacccaaggcttcctagaattt
gaaaccaagcagagctaccatcttactgtgaaagccntcaatgttcctgttgaagaaagg
tatagcttcaccactgtgaatatccagctgaaggggacaaatgaatatgtgcctcagttt
gtttccnaactgcactactttgaagtttcagaagcagctcctgaagggactgtgattgga
gaactgtttgccagtgaccgggacatgggtactgatggggaagtacactgtttgctcttt
ggaaacagtaggnaaaagggtttccagatccacaagaagatggggcagatttatgtgtct
ggacttcttgttagagagaaagcagaaagagtgtccttgaaggtcttggacaagaacttc
ggcagcattcagggagcagatatagacgaagtcactgtgaatatcaccgtgcttgatgcc
aatgacccaccagtgtttagtctaaacatctaccaagtccagatcagtgaaggggtcccg
actgggacaaatgtgacctttgtgggtgcctttgactctgactctatccctgactggagc
acgttttcttacttcattggatcagggaatgaaaacagtgccttttccattaacccacag
acaggccaggtcacagttacctcagagctagaccgggaaaccctacctgtttataatctc
agagtcgtggctgtggattcagggaccccttcggcgacaggaagtgcttccttgctagtc
actctggaagacatcaatgataacgggctggtgttgaccatcagtgacggggaagttcta
gaaaacaagcacccaggaactctggtgatgacccttcagtccacgtatcctgacctcccc
ccaaatcaaggccctttcacctaccatctgctgagcacacggccagccaccaattatttc
agtctgaatactgctggagttctgagtacagccagggtcttgacagggaacagggaacag
atcaacagggaacagatttcagacttcntgtctgtggtcactggagattctggggctcct
cagatgtcttccactggaacagtgcacatcagtgttctagaccaaaatgacaacccctca
cagtcccatacagtggagatatttgttaattattatggcagcttgtttacaggtgggact
ttaggctctgtgaagcctcaggatccagatgtgttagacagcttccactgttccatcacc
tcaggggtcaccagcctcttcagtattccagtgggtagctgtgacctgaactcccagccc
aggtccactgatggcacctttgatctgacagccctcagcagcgacggagttcacaatgca
gtcaccaacactatccgagttttttttttttttttttttttggtctggatcatcttgctc
cgtataggtgttcccacagtcaagtacttcttgactaaccactaccttcacttcctgctc
attgctggttcccagctcactggcttgggcacgactgtgcaactgtatgctgcttatgag
gagggcaacagaacatttctcttaacagctgagaagggaaataataaccagtatgtaaac
tccagtggcgtagccaccgtctttgaaagtatcaaagagattcttcttcgtcagagagga
gtcaaggtgcagtctgtcgatcacgacccatgcattcacagcccttgtcagaacnggggc
agctgcatccgaaaactggcagtggggtctgcactgaagagccaggagagtctgcctgtt
atcattgcagccaatgagcctctgcggcctttccagtgcaaatgtgcatcaggctatgcc
ggcagctggtgtgagtcgacatcagacgaatgccttccagccccttgccacaatgggggg
acctgccacaatttagtggggggattttcatgtagctgccctgacggcttctctgggaga
gcctgtgagagagaaatcaatgagtgccttcccaggccttgcaaggttggggctgtctgc
cagaatttcccagggggcttcaactgtgtgtgtaaaaccggatacacaggtatggtagca
tgttctttcctatgtagcatcaggtttctttcaaagattttagacatggaaagtctatag
DBGET
integrated database retrieval system
