Nannospalax galili (Upper Galilee mountains blind mole rat): 103734987
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Entry
103734987 CDS
T03372
Symbol
Ddx56
Name
(RefSeq) DEAD-box helicase 56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngi03009
]
103734987 (Ddx56)
Enzymes [BR:
ngi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103734987 (Ddx56)
Ribosome biogenesis [BR:
ngi03009
]
Eukaryotic type
Pre-60S particles
Helicases
103734987 (Ddx56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
103734987
NCBI-ProteinID:
XP_008832305
UniProt:
A0A8C6RM92
LinkDB
All DBs
Position
Un
AA seq
546 aa
AA seq
DB search
MEEPEALGFEHMGLDPRLLQAVADLGWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAA
YALPMLQLLLHKKATGPVVEQAVRGLVLVPTKELARQAQSMIQQLTAYCSRDVRVANVSA
AEDPASQRAVLMEKPDVVVGTPSRILNHLQQDNLKLRDSLELLVVDEADLIFSFGFEEEL
KSLLCHLPRIYQAFLMSATFNEDVQALKELVLHNPVTLKLQESQLPGPDQLQQFQVVCET
EEDKFLLLYALLKLSLIRGKSLLFVNTLERSYRLRLFLEQFSIPTCVLNGELPLHSRCHI
ISQFNQGFYDCVIATDAEVLGAPVKGKRRGQGSKGNKASDSEAGVARGIDFHHVSAVLNF
DLPPTPEAYIHRAGRTARANNPGIVLTFVLPTEQSHLGKMEELLSGEGEAPILLPYQFQM
EEIEGFRYRCRDAMRSVTKQAIREARLKEIKEELLHSEKLKTYFEDNPRDLQLLRHDLPL
HPAVVKPHLGNVPDYLVPAALRGLVQTRKKRKKLPSCRKVKKVKTQNPLRNFKHKGKKPK
PAASSS
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggaggagccagaagcgttgggctttgaacacatgggcctggatccccggctcctacag
gccgtcgctgacttgggctggtcgcaacctacgctgatccaggaaaaggccataccgctg
gccctggaggggaaggacctcctggcccgagcccgcacaggctccgggaagacggcagct
tatgctcttccgatgctgcagctgctgctccacaagaaggcgacaggtcctgtagtagaa
caggctgtgagaggccttgttcttgtccctactaaggagctggcccggcaggctcagtcc
atgattcagcagcttactgcttactgttctcgggatgttcgagtggctaatgtctcagct
gctgaagacccagcttctcagagagctgtgttgatggagaagccagatgttgtggtgggg
accccatcccgcatattaaatcacctgcagcaggacaatttgaaacttcgtgactcccta
gagttgctggtggtagatgaagctgatcttattttttcctttggctttgaggaagagctc
aagagtcttctctgtcacttgcctcggatttaccaggcatttctcatgtccgctactttt
aatgaggatgtacaagcactaaaggagctggtactacataatccggttaccctcaagtta
caggagtcccagctgccagggccagaccagttacagcagtttcaggtggtctgtgagact
gaagaagataaattcctgctgctgtatgccctgctgaagctgtcattgattcggggcaag
tcgttgctctttgtcaacactctggagcggagttaccggctccgtctgttcctggagcag
tttagcatccccacctgtgtgctcaatggagaactccctctgcattccaggtgccacatc
atctcacagttcaaccaaggcttctatgactgtgtcatagcaacagatgctgaagtgctg
ggggccccagtcaaaggcaagcggcggggccaagggtccaaaggaaacaaggcctctgat
tcagaggctggtgtggcccggggcatagacttccaccatgtatctgctgtactcaacttt
gatcttcctcccactcctgaggcctatatccatcgagctggcagaacagctcgagccaac
aacccaggcatcgttttgacctttgttctgcccacagaacagtctcatttgggaaagatg
gaggagcttctcagtggagagggtgaggcccctatcctgcttccctaccagttccagatg
gaggagatcgagggcttccgatatcgctgcagggatgccatgcgttcagtgactaaacag
gccattcgggaggcgagattgaaggagatcaaggaagagcttctacattcagagaagctc
aagacatattttgaagacaaccccagggacctccagctgctacgccatgatctgcccttg
caccctgcagtggtgaagcctcacctgggcaatgtccctgactacctggtccctgctgct
cttcgtggcctggttcaaactcgcaagaagcggaaaaagctgccctcctgtaggaaggtt
aagaaggtgaagacccagaacccattgcgcaacttcaagcacaagggaaagaaacctaaa
cctgcagcttcatcctcctag
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