Nannospalax galili (Upper Galilee mountains blind mole rat): 103735017
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Entry
103735017 CDS
T03372
Symbol
Ercc6
Name
(RefSeq) ERCC excision repair 6, chromatin remodeling factor
KO
K10841
DNA excision repair protein ERCC-6
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
103735017 (Ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngi03036
]
103735017 (Ercc6)
03400 DNA repair and recombination proteins [BR:
ngi03400
]
103735017 (Ercc6)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
103735017 (Ercc6)
DNA repair and recombination proteins [BR:
ngi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
103735017 (Ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
FHIPEP
Motif
Other DBs
NCBI-GeneID:
103735017
NCBI-ProteinID:
XP_008832337
UniProt:
A0A8C6S155
LinkDB
All DBs
Position
Un
AA seq
1471 aa
AA seq
DB search
MASEETPSSTQNQEQDSLQSWHASANEDVPVEDSEVREYLPCTPCDYGPSTTTETCVLAA
RRRGPTLLHIDRNQIPVVEPSAQALELQGLGVDVYDQAVLEQGVLQQVDSAMHEASRVAQ
LADAEKEYQSVLDDLMSCTTSLRQINKIIEQLSPQAATNRDINRKLESVKRQKYNKEQQL
KKITAKQKRLQAILGGAEVQVELDHASLEEEDAEPGPSCLGSMLMPAQEMAWEELIRTGQ
MTPFGTPAPQKQEKKPRKIMLNEVSGFEKYLADQAQLSFERKKQAASKRAASKVLVTSKS
KPGQNEAKPNQRSRVLSQTDKRLKKHIRRLQKRALQFQGKTGMPRRKPQEPEMKPEAEGD
SEGEESGSFPTEGEEEEQEEEEERIANLSSDDTNYELRPLCKGQKRQKVPVQEVDDDFFP
SSGEEDEAVEGGRGGRKVVRCRDDGDEDYYKQRLRRWNKLRLQDREECLKLEDDSEESDA
DFDEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSY
SKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYAYKKEKLI
RDIVHCHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLSCKQFRTPHRI
ILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCA
CVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYGILNG
DNQIFSGLVALRKICNHPDLFSGGPKNLSGPPEDELEEDQFGYWKRSGKMIVVESLLKIW
HKQGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITRYNEDTSIFVFL
LTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLMAGTIEEK
IYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLTSPDTSQSTETSAIFAGTGSDVQT
PKRQLKRKTLPALETDPKGKKFSHPNTSVNDSIPTEEKSKATGIAGNETYKESSLTKGDC
HTSRNITCGVGLREDTSAVSEPEELPAVNGDEKCSNSPRVDKASRPSGEASTSEKQGPSA
KGDCCQVQAKPLWVSRQVESHSCKHKTKRKHGVAEEEIPEKHPLPKQNPKNRDAKFEGTR
IPHLVKKRGYHKQNTEQESEAKERSSDDYVLEKLFKKSVGVHSVVKHDAIMDGTSPDYVL
VEAEASRVAQDALKALRLSRQQCLGAASGIPTWTGHRGVSGAPARIRNRFGQKRNSSFPM
QRPSSTSLTEKCQDTVKKEGKDPAPANLSGKEDTASLSRAPSSSSLLARMRARNHLILPE
RLESDSGHLPEAASLSPSTTDHDDLLVEMRNFIAFQAQVDGQASTREILQEFESKLSASQ
SCVFRELLRNLCTFHRTPGGEGIWKLKPEYC
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgaggaaacccccagctcaactcaaaatcaggagcaagactctttacaaagt
tggcatgccagtgctaatgaagatgtgccagttgaggactcagaggtacgggagtacctc
ccttgtactccttgtgattatgggccatccacgactactgagacttgtgtgttggcagcc
agaaggcgggggccaaccctgctgcatattgataggaatcagatcccggtggtggagccc
agtgcgcaggccctggaactgcagggcctgggggtggacgtctatgaccaggctgtgctg
gagcaaggtgtgcttcagcaggtggacagtgccatgcatgaggccagccgagtggcccag
cttgctgatgctgagaaggagtaccagtcagtcctggatgacctgatgtcatgtacgaca
tctctaaggcaaatcaataaaattattgagcaacttagccctcaagctgccaccaacaga
gacatcaacaggaaactagagtctgtaaaacggcagaagtataataaggaacagcagcta
aagaagataactgcaaaacagaagcggctccaggccattttgggaggagcagaggtacag
gtggaactggatcacgccagcctagaggaggaggatgcagagccagggccatcgtgtctt
ggcagtatgctcatgcctgcccaggagatggcctgggaagagctcatccgcactggccag
atgacaccgtttggtactccagcccctcagaaacaggagaaaaagcctagaaaaataatg
ctcaatgaagtatcgggctttgaaaaatatttggcagatcaagcacagctgtcttttgaa
aggaagaaacaagctgctagtaaaagagcagccagtaaagtcttggtcacctccaagtca
aaaccaggacagaatgaagccaaaccaaaccaaagaagcagggtcctctcacagacagat
aagcgcttgaagaagcacatcagaaggctccagaagagggcgctgcagttccaggggaaa
acgggaatgccaagaaggaagccccaggagcccgagatgaagccagaggccgagggagac
tctgagggtgaggagtctggctccttccccaccgagggagaggaagaagagcaggaagag
gaggaagagaggattgctaacctatcttcagatgataccaactatgaactgaggcctctg
tgcaagggccagaaacgccagaaggtcccagtgcaggaggttgatgacgactttttccca
agttccggggaagaagatgaagctgtggaaggaggaagaggaggtcgaaaagtagtgagg
tgccgagacgatggagatgaggattactataagcagcggttaaggagatggaataagctg
aggctgcaggacagagaggaatgcctgaagcttgaggacgactctgaggagagcgacgct
gactttgatgaaggctttaaagtgccaggttttctgtttaaaaagctctttaagtatcag
cagacaggtgttaggtggctgtgggaattgcactgccagcaggcaggaggaattctggga
gacgagatgggattgggcaagaccatccagataattgccttcttggcaggtctgagctac
agcaagatcaggactcgcggttcaaattacaggtttgaggggttgggccccactgtgatt
gtctgcccaacgacagtgatgcatcagtgggtgaaagaattccacacatggtggcctcca
ttcagagtggcaattctgcatgaaaccggttcctatgcttacaaaaaggagaagctgatt
cgagatattgtgcattgtcatgggattctgatcacttcttactcctacattcgcctgatg
caagatgacattagcagacacgactggcattatgtaatcttagatgaagggcacaaaatt
cgaaacccaaatgctgctgtcaccctttcctgcaaacagttccgcacacctcatcggatc
atcttgtctggctcaccgatgcagaataacctccgagagctgtggtcgctctttgatttt
gtctttccaggaaagttgggcacattacctgtgtttatggagcagttctctgtccccatc
accatggggggctactccaatgcttccccagtgcaggttaaaactgcttataagtgtgca
tgtgtcttaagagacaccattaacccatacctactgcggagaatgaaatcagacgtcaag
atgagcctttctctgccagataaaaacgaacaggtattattttgccgtcttactgatgag
cagcacaaagtctaccagaatttcattgattccaaagaagtttacggaattctcaatgga
gataatcagattttctctggacttgtagccctaagaaaaatctgcaaccaccctgatctc
ttttccggtggtcccaagaatctcagtggtcctccagaagatgaactggaagaagatcag
tttggatactggaagcgttctgggaaaatgattgttgttgagtctttgctgaagatatgg
cacaagcagggtcagcgagtactgctgttttcccagtcaaggcagatgctgcacatattg
gaagtgttcctgagagcccacaagtattcctatctcaagatggatgggaccactaccatc
gcgtcacgacaaccactgattacaagatacaacgaggacacatccatcttcgtctttctt
ctgaccacgcgggtgggcggcataggagtcaacctgaccggcgccaacagagtcataatc
tacgaccctgactggaatccaagcaccgacacacaggcgcgggagcgagcgtggaggata
ggtcagaagaagcaggtgactgtgtacaggcttctgatggccggtactattgaggaaaag
atctaccaccgacaaatcttcaagcagtttttgacaaacagagtgctaaaagatccaaaa
caaaggcggtttttcaaatccaatgatctttatgagctgtttactctgactagtcctgat
acatcccagagcacagaaacaagtgctatttttgcaggaactggttcagatgttcagaca
cctaaacgccagttgaaaagaaaaactttaccagctctagaaacagacccaaaaggcaag
aagttctcccatcctaatacatctgtaaatgacagcattccaactgaggaaaaatctaaa
gcaacggggattgcaggaaatgaaacttataaagaaagtagtcttacgaaaggtgactgt
cacacaagtaggaacataacctgtggtgtcgggcttagagaagacacaagcgcagtatct
gagccggaggagctgccagcagtgaatggagatgagaagtgctcaaattctccaagagtt
gacaaagcatctaggccgtctggtgaagcaagcaccagtgagaagcaaggcccctcggca
aaaggagactgctgccaggttcaggcgaaacctttgtgggtgagcagacaagtggaaagt
cattcttgtaagcataagacaaaaagaaagcatggtgttgcagaggaagagatcccagag
aaacatccactgccaaagcaaaaccctaagaacagagatgccaagtttgagggaactcga
atcccacacctagtgaagaaaaggggataccacaagcaaaatactgagcaagaaagtgag
gccaaggaacggagcagtgatgactatgttttggaaaagcttttcaaaaaatcagtgggt
gtgcacagcgttgtgaagcatgatgccatcatggatgggaccagccctgattatgtgctg
gtggaggcagaggccagccgagtggctcaggatgccttgaaagccctgagactctctcgt
cagcagtgcctgggggcagcatctggcattcccacctggacaggccacaggggtgtttct
ggtgccccagctagaataaggaatagatttggtcagaaaaggaactccagcttccctatg
caacgtccttcttcaacatctctaacagaaaaatgtcaggacactgtgaaaaaggaggga
aaagatcctgcccctgccaacttgagtggcaaagaagacacagcgtctttatccagagcg
cccagttcttcctcactcttagctagaatgcgagcaagaaaccacctgattttgccagag
cgcttggagagcgacagtgggcaccttccagaggcggcttccttgtctccctccaccaca
gaccatgatgatcttctggtagaaatgaggaatttcattgctttccaggcccaggtggat
ggccaggctagcactcgggagatactgcaggagtttgaatccaagctgtctgcctcacag
tcctgtgtcttccgagaactgctgagaaatctctgcacttttcatagaactcctggtggt
gaagggatttggaaactgaagccagaatactgctga
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integrated database retrieval system
