Nannospalax galili (Upper Galilee mountains blind mole rat): 103735367
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Entry
103735367 CDS
T03372
Symbol
Chd1
Name
(RefSeq) chromodomain helicase DNA binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngi03021
]
103735367 (Chd1)
03036 Chromosome and associated proteins [BR:
ngi03036
]
103735367 (Chd1)
Transcription machinery [BR:
ngi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
103735367 (Chd1)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
103735367 (Chd1)
SLIK complex
103735367 (Chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
103735367
NCBI-ProteinID:
XP_008832816
UniProt:
A0A8C6W553
LinkDB
All DBs
Position
Un
AA seq
1711 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDEDSGSASGSGSGSSSGSSSDGSSSQSGSSDADSGSDSGS
QSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQPQPQQQPASSNS
GSEEDSSSSEDSEDSSSEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEERDKSSCDETES
DYEPKNKVKSRKPQNRSKSKNGKKILGQKKRQIDSSEDEDDEDYDNDKRSSRRQATVNVS
YKEDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRVGRRGATGATTTIYAVEADG
DPNSGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKR
WLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGFPDYYCKWQGLPYSEC
SWEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPAYIGGHEGLEL
RDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLST
LTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKA
FLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIM
PEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSAL
QKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQ
HLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGE
LRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI
GQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFN
KEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKV
ANFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQIS
FNGSEGRRSRSRRYSGSDSDSVSERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKF
GGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDSSSGTERTGGRLGKVKGPT
FRISGVQVNAKLVIAHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNL
LIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKKE
AQRLAGAGGSKRRKTRTKKNKALKSLKLKEESKSDSSPLPSEKSDEDDDKMSESKSESKE
RSRKCVVSDAPVHITASGEPVPIAEESEELDQKTFSICKERMRPVKAALKQLDRPEKGLS
EREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKH
AIKKRQESQQNNDQNSTMNTHVIRNPDMERLKENTNHDDSSRDSYSSDRHLSQYHDHHKD
RHQGDSYKKSDSRKRPYSSFSNGKDHREWDHYKQDSRYYSDREKHRKLDDHRSRDHRSSL
EGSLKDRCHSDHRSHSDHRLHPDHRTSSEYTHHKSSRDYRYHSDWQMDHRAASSGPRSPL
DQRSPYGSRSPFEHSAEHRSTPEHTWSSRKT
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagcagtggagaatcaagccagtca
gatgaggattctgggtcagcatcaggctctggatcaggctcgagctctggcagcagtagt
gatggaagtagtagccagtctgggagcagcgatgctgattctggctctgactctggaagt
caatcagagtctgaatcggacacatccagagagaacaaagttcaagcaaaaccaccgaaa
gttgatggagctgagttttggaaatctagccctagtattctggctgttcagagatctgcg
atgctcaagaagcagcaacagcagccacagccgcagcaacagccagcttcatctaacagt
ggatcagaagaggattcctctagcagtgaagattctgaggactcctccagcgaggtcaaa
aggaaaaagcataaagatgaagattggcagatgtctggatcaggatctccatctcagtct
ggttcagattccgaatctgaagaagagagagataaaagcagctgtgatgagacagagtca
gattatgagccgaaaaacaaggtcaaaagcagaaaaccacaaaatagatctaagtcaaaa
aatggaaaaaaaattcttggtcaaaaaaagagacagattgattcatctgaagatgaagat
gatgaagattatgataatgataaacgaagttctcgtcgtcaagccacagtcaatgtgagc
tacaaggaagatgaagaaatgaaaacagattctgatgacctgctggaagtctgtggagag
gatgttcctcaacctgaggaggaggagtttgaaacaatagaaaggtttatggattgcaga
gttgggagaagaggagctactggtgctactacaaccatctatgcagttgaagcagatggt
gacccaaattcaggatttgaaaaaaacaaggagccaggagagatacagtatttaattaaa
tggaaaggatggtcacatatccacaatacttgggagacagaagaaaccctcaagcagcag
aatgttagaggaatgaaaaagttggataattataagaaaaaagatcaggaaacaaaaaga
tggttgaaaaatgcttcaccagaagatgtggaatattataattgccaacaagaacttaca
gatgatctacataaacagtatcagatagtggaacgtataattgctcattccaatcagaag
tcagcagctggttttcctgattattactgcaaatggcaggggcttccatactcagagtgc
agctgggaagatggcgctctcatttccaaaaagtttcaagcatgtatcgatgaatatttt
agcaggaatcagtcaaaaaccactccttttaaagactgcaaagtattgaagcaaagacca
agatttgtagccctgaagaagcaaccagcatatattggaggacatgaaggtttagaatta
agagattatcaactcaatggtttaaattggcttgcccattcttggtgcaaaggaaatagt
tgcatacttgctgatgaaatgggccttggaaaaacaatacagacgatctcatttttgaat
tatttgtttcatgaacatcaattatatggaccttttctattagttgtgccactctccact
ctgacttcttggcaaagagagattcagacgtgggcttctcagatgaatgctgttgtttat
ttaggtgatatcaacagtagaaacatgatcagaactcatgaatggatgcatccccagacc
aaacggttaaaatttaatatacttttaacaacttatgaaattttattgaaggataaggca
ttccttggcggtctgaattgggcatttataggtgttgatgaagcacatagattaaaaaat
gacgactcccttctgtataaaactttaattgattttaagtccaatcaccgactccttatc
actggaactcctctgcaaaactccctgaaagagctctggtcattgctacatttcattatg
ccagaaaagttttcttcctgggaagattttgaagaagaacatggtaaaggcagagaatat
ggttatgcaagccttcacaaagagcttgagccatttctgttacgtcgagttaagaaagat
gtggaaaaatctcttcctgccaaggttgagcagattttaagaatggaaatgagtgcttta
cagaagcagtattacaaatggattttaactaggaattacaaagccctcagcaaaggttcc
aagggcagtacctcaggctttttgaacattatgatggagctaaagaaatgttgtaaccat
tgctacctcattaaaccaccagataataatgaattctataataaacaagaggccttacaa
cacttaatccgtagtagtggaaaattaattcttctagacaagctgttaattcgcctaaga
gaaagaggcaaccgagtactcattttttctcaaatggtgcggatgttagatatacttgca
gaatatttgaagtaccgtcagttcccctttcaaagattagatggatcaataaaaggggag
ctgaggaaacaagccctagatcattttaacgctgagggctcggaggatttctgctttttg
ctttctacaagagctgggggcttagggattaatttagcctctgctgacactgttgttata
tttgattctgattggaatccacaaaatgaccttcaggcacaggcaagagctcatcgaatt
gggcagaagaaacaggtgaatatatatcgtctagttacaaaaggatctgttgaagaagat
attcttgaaagggccaaaaagaaaatggttttagatcatcttgtgattcagagaatggac
accactgggaagactgtactgcacacaggttctgctccatcaagttctacccctttcaat
aaagaagaattatcagccatcttaaagtttggtgctgaggagctttttaaggaacctgaa
ggagaagaacaagagccccaggaaatggatatagatgaaatcttgaagagagcggaaact
catgaaaatgagccaggccccctaaccgtaggagatgaattactttcccaattcaaggtt
gccaacttttcaaatatggatgaagacgacattgaattggaacctgaaagaaattcaaaa
aactgggaggaaatcattccagaagatcaaagaagacgattagaagaggaagaaaggcaa
aaggaacttgaagaaatttatatgctcccaagaatgagaaactgtgcaaaacagataagt
ttcaatggaagtgaagggaggcgcagtagaagcaggagatactctggatctgatagtgat
tcagtctcagaaaggaaaaggccaaagaaacgtggaagaccacgaactatccctcgggag
aatattaaaggatttagtgatgcagaaattaggcggtttatcaagagctataagaaattt
ggtggccctctggaaagattagatgcaattgctcgagatgccgaattagttgataaatca
gaaacagaccttagacggctaggagaattggtgcataatggttgcattaaagcattaaag
gatagttcttcagggacagaacgaacaggtggtagacttggaaaagtgaaggggccaaca
ttccgaatatcaggagtacaagtgaatgccaaactagtcatcgcccatgaagaagaattg
atacctttgcacaaatccattccttcagatccagaagaaagaaagcagtacacaatccca
tgccacacaaaggcagctcattttgatatagactggggcaaagaagatgattccaatttg
ttaatcggtatctatgagtatggatatggaagctgggaaatgatcaaaatggatcctgac
ctcagtttaacacacaagattcttccagatgatcccgataaaaaaccacaagcaaaacag
ttgcagacgcgtgcagactacctcatcaaattacttagtagagatcttgcaaaaaaagag
gctcagagacttgctggtgcaggaggctcaaaaaggagaaaaacaagaactaagaagaat
aaagcactgaaatccttaaaactgaaagaagaatcaaagagtgactcttctcccctgcct
tcagagaaatctgatgaagatgatgataaaatgagtgaatcgaagtctgaaagtaaagaa
cggtccagaaagtgtgtggtatcagatgctccggttcatatcactgcaagtggggagcca
gtgcccatagctgaagaatctgaagagctggatcagaagactttcagtatttgtaaagaa
agaatgagacctgtcaaagcagctttgaaacaacttgataggcctgagaaaggcctttca
gaaagagaacaactggaacatactagacagtgcttaataaaaattggagaccatatcaca
gaatgcctgaaagaatacaccaatcctgagcaaattaagcagtggagaaaaaacctgtgg
atttttgtatctaagtttactgagtttgatgctagaaaactgcataaattgtataagcat
gctattaaaaaaagacaagaatctcagcaaaacaatgaccagaacagcaccatgaatact
catgtgattagaaatccagacatggaaaggttaaaggagaacacaaatcatgacgacagc
agcagagacagctactcttctgacagacacttatctcagtaccatgatcaccataaagac
cgccaccagggagattcttataaaaaaagtgattccaggaaaagaccctactcttcattt
agtaatggcaaagatcatcgtgaatgggatcactacaagcaggacagcagatactacagt
gacagagagaaacacagaaaactagatgatcacaggagtagagatcacaggtcaagtttg
gaaggaagtttaaaggatagatgccattctgatcatcgatctcattcagaccatcgattg
catccagaccatcggacaagttctgaatatacacaccataaatcttccagggattatagg
tatcactcagattggcaaatggaccaccgagctgccagcagtggcccaaggtcaccttta
gatcagaggtctccttatggctctaggtctccatttgaacattcggctgaacatagaagt
acacctgagcacacctggagtagtcggaaaacataa
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integrated database retrieval system
