Nannospalax galili (Upper Galilee mountains blind mole rat): 103735634
Help
Entry
103735634 CDS
T03372
Symbol
Sf3b3
Name
(RefSeq) splicing factor 3b subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103735634 (Sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngi03021
]
103735634 (Sf3b3)
03041 Spliceosome [BR:
ngi03041
]
103735634 (Sf3b3)
03036 Chromosome and associated proteins [BR:
ngi03036
]
103735634 (Sf3b3)
Transcription machinery [BR:
ngi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
103735634 (Sf3b3)
Spliceosome [BR:
ngi03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
103735634 (Sf3b3)
Complex B
103735634 (Sf3b3)
Complex C
U2 SnRNP specific factors
103735634 (Sf3b3)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
103735634 (Sf3b3)
TFTC complex
103735634 (Sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
103735634
NCBI-ProteinID:
XP_008833202
UniProt:
A0A8C6RVD5
LinkDB
All DBs
Position
Un
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
EDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtacaacttgaccttgcagcgtgccactggcatcagctttgccatccatggc
aacttctcgggaaccaaacaacaggaaattgttgtttcccgtggaaagatcttggagtta
cttcgcccagaccccaacactggcaaagtgcataccctcctcactgtggaagtatttggt
gttattcgatcactcatggcctttaggctaacaggtggcaccaaagactacattgtagtt
ggcagtgactcaggacgcattgttatcttggaataccagccatctaagaatatgtttgag
aaaattcaccaagaaacttttggcaaaagtggatgccgtcgtatcgttcctggccagttc
ttagctgtggatcccaaagggcgagctgttatgatcagtgcgattgagaaacagaagttg
gtatatatcttgaatagagatgcagcagcccgactcacaatttcatctcccctggaggcc
cacaaagcgaacactttagtatatcatgtggttggagtagatgtggggtttgaaaaccct
atgtttgcttgtctagaaatggactatgaggaagcagacaacgatcccacaggggaagca
gcagctaatacccagcagacgcttactttctatgagttagaccttggtttaaatcatgtg
gtccgaaaatacagtgaacctttggaggaacatggcaacttccttattacagttcctgga
gggtcagatggtccaagtggagtgctgatctgctctgaaaattacatcacctataagaac
tttggtgaccaaccagatatccgttgtcctattcccaggagacggaatgacctggatgac
cctgaaagaggaatgatttttgtttgttctgccacccacaagaccaagtccatgttcttc
tttttggcccaaactgagcagggagatatcttcaagatcactttggagacagatgaagat
atggtaactgagatccgcctgaagtattttgataccgtacctgttgctgctgccatgtgt
gtgcttaaaacaggtttcctttttgtggcatcagaatttggaaaccattacttgtatcaa
attgcacatcttggagatgatgatgaagaacctgagttttcctctgccatgcctctcgaa
gaaggtgacacgttcttctttcagccaagaccactcaaaaaccttgtgctggttgatgaa
ctggacagcctctctcccattctgttttgccagatagctgatctggccaatgaggacact
ccacagctgtatgtggcctgtggtaggggacccaggtcatctctgagagttttaagacat
ggacttgaggtatcagaaatggctgtttctgagctacctggtaaccccaatgctgtctgg
acagtacgtcggcacattgaagatgagtttgatgcctatatcattgtgtctttcgtgaac
gccacccttgtgctgtctatcggagagactgtagaagaagtgactgactctgggttcttg
ggcaccactccaaccttgtcctgctccttactaggagatgacgccttggtgcaggtgtat
ccagatggcattcgacacatacgagcagataagagagtcaatgagtggaagacccctggc
aagaaaacaatagtaaagtgtgcagtgaaccagcgacaggtcgtgatcgccctgactgga
ggagaactggtctattttgagatggatccttcgggacagctgaatgagtacacagagcgg
aaggagatgtcagcagacgtagtgtgcatgagtctggccaatgtacctcctggagaacaa
cgatctcgattcctggctgtgggactggtggacaacactgtcagaatcatctccctggac
ccatcagactgtttgcagcctctgagtatgcaggcccttccagcccaacctgagtcctta
tgtatcgtggaaatgggtgggactgaaaagcaggatgagctgggtgagaggggctctatt
ggcttcctgtacctgaacattgggctacagaatggtgtgctgctgagaactgtccttgac
cctgtcacgggggacctgtctgacactcgaactaggtacctgggttcccgtcctgtgaag
ctcttccgagtccggatgcaaggccaggaggcagttttggccatgtcaagtcgctcatgg
ttgagctattcttaccagtctcgtttccatctcacccctctgtcttatgagaccctggag
tttgcgtctggctttgcttctgaacagtgtcctgaaggcattgtcgccatctccaccaac
accctgaggattttggcattggagaaacttggtgctgtgttcaatcaagtagcttttcca
ctgcagtatacacccaggaaatttgtcatccaccctgagagtaacaaccttatcatcatt
gagacggatcacaatgcctacactgaggccaccaaagctcagagaaagcagcaaatggca
gaggaaatggtggaagcagcaggggaggacgagcgggagctggctgcagaaatggccgca
gcgttcctcaatgaaaacctgcctgaatccatttttggagctcccaaagctggcaatggg
cagtgggcctctgtgattcgggtgatgaatcctattcaggggaacacactagaccttgtc
cagctggaacaaaatgaggcagcttttagtgtggctgtgtgtaggttctccaacactggt
gaagactggtatgtgctggtgggcgtggccaaggacctgatactgaacccacgatctgtg
gcagggggctttgtctacacatacaagcttgtgaacaatggggaaaaactggagtttttg
cacaagactccagtggaagaggttcctgctgccattgccccattccaggggagagtattg
attggtgtggggaagcttttacgagtctatgacctgggaaagaagaagttacttcgaaag
tgtgagaataagcatattgccaattacatatctgggatccagactattgggcacagggta
attgtgtctgatgtccaagaaagcttcatctgggttcgctacaagcgtaacgagaaccaa
ctcattatctttgctgatgatacctacccccgatgggtcactacagctagcctacttgac
tatgacactgtggctggggcagacaagtttggcaacatttgtgtggtgagactcccacct
aacaccaatgatgaggtggatgaagatcctaccggaaacaaagccctctgggatcgtggc
ttgctcaatggggcttcacagaaggcagaagtaatcatgaactatcatgtcggggaaaca
gtgctgtcattgcagaagaccacactgattcctggaggctcagagtcacttgtctatacc
actttgtctggaggaattggtatccttgtccctttcacgtctcatgaggatcatgacttc
ttccagcatgttgaaatgcaccttcggtctgagcatccccccctctgtgggcgagaccac
ctcagcttccgatcttattatttccctgttaagaatgtgattgatggagacctctgtgag
cagttcaactctatggagcccaacaagcagaaaaacgtctctgaagagctagaccgaacc
ccaccggaagtgtccaagaagcttgaggatattcgaacccgttatgctttctga
DBGET
integrated database retrieval system
