Nannospalax galili (Upper Galilee mountains blind mole rat): 103736058
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Entry
103736058 CDS
T03372
Name
(RefSeq) protocadherin beta-4-like
KO
K16494
protocadherin beta
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngi04515
]
103736058
Cell adhesion molecules [BR:
ngi04515
]
Cadherins
Protocadherins
103736058
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
103736058
NCBI-ProteinID:
XP_008833709
LinkDB
All DBs
Position
Un
AA seq
787 aa
AA seq
DB search
MEKQERQSGRIPPNRQVMALIFMMLFVHVLSETTPYSMLEETDSGSLVAHLAKDLGLGSG
ELAARSARVISDDYKQRLLLDLETGDLFLREKLDREELCGPVEPCILHFQVSLERPVEFF
QEQLLIQDINDHSPEFPDGEVLLKILENSEPGTRFPLKSAQDLDVGSNGLQQYTISPNSH
FHVLTRNHSEGKKSPELVQDRALDREEQAEFSLTLTAWDGGSPPRSGTVLVRILIMDVND
NAPEFVHTPYEVQVLETSPPDSLVLTVLAQDADAGYFGNVSYGLFQASDEIQQTFSINEA
TGEIRLKKELDFEKIKSYHVEIEATDGGGLSGKGIVVVEVVDVNDNAPELTISSLTSSVP
ENAPETILCIFRVGDRDSGENGKIVCSIPDNLPFLLKPTFKNFYTLVTEGPLDRESRAEY
NITITVSDLGTPRLKTQHNITLHVSDVNDNAPAFSQASYTMYVPENNSPALHIGTVRATD
SDSGANAQLTYSLLPPHDPHLALASLVSINADNGQLFALRALDYEALQAFEFRVGAADRG
SPALSSQALVRVLVLDANDNAPFVLYPLQNASAPCTELLPRAAEPGYLLTKVVAVDRDSG
QNAWLSFQLLKATEPGLFGVWPHNGEVRTARLLSERDAPRHRLLLLVKDNGEPPQSASVT
LHVLLVDGFSQPYLPPPEVARQPAQPDALTLYLVIALASVSSLFLFSLLLFVALRLCRRT
RPASLPGGSVPEGRFPGHLLDVSGAGTLSHSYQYEVFLKPMVPNLLLQDPGREVKENPHC
RNSFEFS
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaggagagacagtcagggagaattcctccaaacaggcaagtaatggctttg
atttttatgatgctttttgttcatgttctcagcgagactactccatactctatgttggag
gaaacagacagcggttcccttgtagcccatctggccaaggacttggggctgggatctggg
gaactggctgcccggtctgcacgggtgatttctgacgattacaagcagcgattgctactg
gatcttgagactggagatttgtttctgagagagaaactagaccgggaagagctgtgtggg
cccgtggagccatgtatactgcatttccaggtgtctcttgaaagaccagtggaatttttt
caagagcaattattgatccaggacataaatgatcactctccagaattcccagatggggaa
gtgctcttgaaaatactggaaaacagtgagcctgggactcggtttccattgaaatcagcc
caggatttggatgtgggcagcaatgggctccaacaatacaccatcagccccaattctcat
tttcatgtgctcactagaaatcatagtgagggcaagaaatccccagaattggtgcaagac
agagccctggacagagaggagcaggctgagttcagcttaaccctcaccgcttgggatggt
gggtctccacctaggtctgggacagtcctggttcgaatcctgatcatggatgtgaatgac
aatgctcctgaatttgtacacaccccctatgaggtgcaggtcctggagaccagtccccca
gactccctagtccttactgtcttagcccaggatgcagatgctgggtactttggcaatgtt
tcctatggcttgtttcaagcatcagatgagattcaacaaacattctcgataaatgaagcc
acaggagaaattcgattgaaaaaggaattggactttgaaaaaattaagtcttatcatgtg
gaaatcgaggccacagatggaggaggactgtctgggaaaggcattgtagtggtagaggtg
gtggatgtgaacgacaatgccccggaactgaccatttcgtcactcaccagctcagtacca
gaaaacgctcctgaaaccatactctgcatattcagagttggagacagagattccggagag
aacggaaagatcgtttgttctatcccagataatctgccattccttttaaaacctactttc
aagaacttttacaccttagtgacagaagggccactagacagagagagcagagctgaatac
aacatcaccatcacagtctctgacctgggcacacccaggctgaaaacccagcacaacata
accttgcatgtctccgacgtcaacgacaacgcccccgccttcagccaagcctcctacacc
atgtacgtccccgagaacaacagccccgccctgcacataggcacagtcagagccacagac
tcagactcaggcgccaacgcccagctcacctactcgctgctgccgccccacgacccgcac
ctggccctcgcctcgctggtgtccatcaacgccgacaacgggcagctgttcgccctcagg
gcgctggactacgaggccctgcaggccttcgagttccgcgtgggcgccgcagaccgaggc
tcgcccgcgctcagcagccaggcgctggtgcgcgtgctggtgctggacgccaacgacaac
gcgcccttcgtgctctacccgctgcagaacgcctctgcgccctgcaccgagctgctgccc
agggcggccgagccgggctacctgctcaccaaggtggtggcggtcgaccgcgactcgggc
cagaacgcctggctgtcgttccagctgctcaaggccaccgagccaggcctgttcggagtc
tggccgcacaatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgcgcccagg
cacaggctgctgctgctggtcaaggacaatggcgagccgccgcagtcggccagcgtcacg
ctgcacgtgctgctggtggatggcttctcgcagccctacctgccgccgcccgaagtggcg
cgccagcccgcgcagcccgacgcgctcacgctctacctggtcatcgccttggcctcggtg
tcttcgctcttcctcttctcgctgctgctcttcgtggccctcaggctgtgcaggaggacc
aggccggcctctctgcctggcggctctgtgcctgagggccgctttcctggacatctgctg
gacgtcagtggggcggggaccctgtcccacagctaccaatatgaggtctttctgaaaccc
atggtccccaacctgttgcttcaggaccctgggagagaagttaaggaaaatccccactgc
aggaatagctttgagttcagctag
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