Nannospalax galili (Upper Galilee mountains blind mole rat): 103736059
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Entry
103736059 CDS
T03372
Name
(RefSeq) protocadherin beta-5-like
KO
K16494
protocadherin beta
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngi04515
]
103736059
Cell adhesion molecules [BR:
ngi04515
]
Cadherins
Protocadherins
103736059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
103736059
NCBI-ProteinID:
XP_008833710
UniProt:
A0A8C6R221
LinkDB
All DBs
Position
Un
AA seq
778 aa
AA seq
DB search
METALPKATQKRQVVLLTMLLLLWEVECEAVTYSIPEETESGFLVANLAKDLGLKVGDLA
SRGARIHYKGNKELLQLDVKTGNLLLYEKLDREVLCGITEPCVLHFQLILDNPVQFFQTD
LQLTDINDHSPAFPDREMLLKIPENVQPGTVFPLKTAQDLDIGSNAVQNYTISPNLNFHV
VTQNRGDGRKYPELVLDRALDREEQPELSLTLTALDGGASPRSGTTTVRIEVLDINDNAP
QFIQPVYAVQVPENSPLDSLVITVSARDLDAGTHGNLAYSLFQGDEVSQPFEIDEITGEI
RLKQAVDFETTRNYNMEIIATDSGGLSGKCSVAVEVVDVNDNAPELTISSLTSSIPENAP
ETVVAVFSVSDPDSGDNGKMVCSIQNDLPFLLKPTLKNFYTLLTEGPLDRESRAEYSITI
TVSDLGTPRLKTQHNITLQVSDVNDNAPAFSQASYTMYVPENNSPALHIGTVRATDSDSG
ANAQLTYSLLPPHDPHLALASLVSINADNGQLFALRALDYEALQAFEFRVGAADRGSPAL
SSQALVRVLVLDANDNAPFVLYPLQNASAPCTELLPRAAEPGYLLTKVVAVDRDSGQNAW
LSFQLLKATEPGLFGVWPHNGEVRTARLLSERDAPRHRLLLLVKDNGEPPQSASVTLHVL
LVDGFSQPYLPPPEVARQPAQPDALTLYLVIALASVSSLFLFSLLLFVALRLCRRTRPAS
LPGGSVPEGRFLGHLLDVRGAGTLSHSYQYEVCLAGDSGTDEFKFLQPIIPTSLIQDT
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggagacagcgctaccaaaagccacacagaaaaggcaagtggttttgcttactatgtta
ttgcttttgtgggaggttgaatgtgaagcagttacatattccataccagaagaaacagaa
agtggcttcttggtggctaatctagcaaaggatctggggctcaaggtgggggacctggcc
tctcgaggagctcgaatccattacaaaggaaacaaagagctcttgcagctcgatgtaaag
acaggcaatttgcttctgtatgaaaaactggaccgggaggtcctgtgtggcattacagaa
ccctgtgtgttgcatttccagctgatactggacaacccagtgcagttttttcaaactgat
ctgcaactcacagacataaatgaccattccccagcatttccagacagggaaatgctccta
aaaattcctgagaatgttcagccagggactgtgtttcctctaaaaacagctcaggactta
gacatagggagcaatgctgttcagaactacaccatcagccccaacctcaatttccatgtt
gtcactcaaaatcgtggagatggcaggaaatacccggagctggtgctggacagagcgctg
gatagggaggagcagcctgagctcagcttaaccctcactgcgctggatgggggggcttcg
cccaggtctgggaccaccacagttcgaattgaagtcctggacatcaatgacaacgccccc
cagttcatacagccagtctatgcggtgcaggttcctgagaacagcccacttgattcctta
gttatcactgtctctgccagagatttagacgctgggactcacgggaatttagcctactct
ctatttcaaggtgatgaagtttctcaaccatttgaaatagatgaaatcacgggagaaatt
cgtctgaaacaggcagtagattttgagacaactcgaaattataacatggaaattatagcc
acggacagtggggggctttctggaaaatgcagtgtggctgtagaggtggtggatgtgaat
gacaacgcgccagaactgaccatatcttcactcactagttctatcccagaaaatgcacct
gagactgtagttgctgttttcagtgtttctgatccagattctggagacaatggaaaaatg
gtttgttctattcagaacgacctcccattcctgttgaagcccacattgaaaaacttctat
accttactgacagaggggccactagacagagagagcagagctgagtacagcatcaccatc
acagtctccgacctgggcacacccaggctgaaaacccagcacaacataaccttgcaggtc
tccgacgtcaacgacaacgcccccgccttcagccaagcctcctacaccatgtacgtcccc
gagaacaacagccccgccctgcacataggcacagtcagagccacagactcagactcaggc
gccaacgcccagctcacctactcgctgctgccaccccacgacccgcacctggccctcgcc
tcgctggtgtccatcaacgccgacaacgggcagctgttcgccctcagggcgctggactac
gaggccctgcaggccttcgagttccgcgtgggcgccgcagaccgaggctcgcccgcgctc
agcagccaggcgctggtgcgcgtgctggtgctggacgccaacgacaacgcgcccttcgtg
ctctacccgctgcagaacgcctctgcgccctgcaccgagctgctgcccagggcggccgag
ccgggctacctgctcaccaaggtggtggcggtcgaccgcgactcgggccagaacgcctgg
ctgtcgttccagctgctcaaggccaccgagccaggcctgttcggagtctggccgcacaat
ggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgcgcccaggcacaggctgctg
ctgctggtcaaggacaatggcgagccgccgcagtcggccagcgtcacgctgcacgtgctg
ctggtggatggcttctcgcagccctacctgccgccgcccgaagtggcgcgccagcccgcg
cagcccgacgcgctcacgctctacctggtcatcgccttggcctcggtgtcttcgctcttc
ctcttctcgctgctgctcttcgtggccctcaggctgtgcaggaggaccaggccggcctct
ctgcctggcggctctgtgcctgagggccgctttctgggacatctgctggacgtcaggggg
gcggggaccctgtcccacagctaccagtatgaggtgtgtctggcgggagacagtgggaca
gatgagttcaaattcctgcagccaattatccccactagtctaattcaagatacctag
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