Nannospalax galili (Upper Galilee mountains blind mole rat): 103736065
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Entry
103736065 CDS
T03372
Name
(RefSeq) protocadherin beta-13-like
KO
K16494
protocadherin beta
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngi04515
]
103736065
Cell adhesion molecules [BR:
ngi04515
]
Cadherins
Protocadherins
103736065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
103736065
NCBI-ProteinID:
XP_008833722
LinkDB
All DBs
Position
Un
AA seq
782 aa
AA seq
DB search
MEESRKLICRQRQVLFIFFLLELSLVGVAQPRHYSLVEEKEGRSFVTNLLKDLDLEQGGL
SRRGARVISKGNKLHLQLDQESGDLLLNEKPDREELCGHTEPCVLHFQVLLDNPLDIFQA
ELQVIDINDHSPAFLDKEIILKISESSLPGTSFPLKNAQDMDVGENSIDNYLISSNSYFH
VLTCKRSNGKKYPELVLDRALDREEEAELRLILIAQDGSSPPRSGTTDVHVEVVDINDNA
PQFEQLFYRVQFPEDSPVGFLVVTVSATDKDIGINGEISYSLFQASYDISKTFSIHPLTG
EVRLKEQLDFERTQSYEVNIEARDAGSFSGKCTILTQVVDVNDNAPEITMSAFTSPVLEN
SLETMVAVFSVSDLDSGENGKISCYIQDDLPFFLKSSAENFYTLLTEKPLDRESRAEYNI
TITVTDLGTPRLKTQHNITVQVSDVNDNAPAFSQASYTMYVPENNSPALHIGTVRATDSD
SGANAQLTYSLLPPHDPHLALASLVSINADNGQLFALRALDYEALQAFEFRVGAADRGSP
ALSSQALVRVLVLDANDNAPFVLYPLQNASAPCTELLPRAAEPGYLLTKVVAVDRDSGQN
AWLSFQLLKATEPGLFGVWPHNGEVRTARLLSERDAPRHRLLLLVKDNGEPPQSASVTLH
VLLVDGFSQPYLPPPEVARQPAQPDALTLYLVIALASVSSLFLFSLLLFVALRLCRRTRP
ASLPGGSVPEGRFLGQLLDVSGAGTLSHSYQYEVCLAGDSGAGEFKVLKPILPNFQGHSP
VP
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaagcaggaagctcatttgcagacaaaggcaagtgctttttatctttttccta
ttagagttatctctggtgggtgtagcccaaccaaggcactattctctagtggaagaaaag
gagggcaggtcctttgtaaccaatttactaaaggacctagatcttgagcaggggggactt
tccaggcgaggggctagggtcatttctaagggtaacaagctacatttgcagctcgatcag
gagagtggggatttgctgttaaatgagaaaccggaccgggaggaactgtgtggacacaca
gagccctgtgtgctacatttccaagtgttgctagacaatcccttagacatatttcaagct
gagctacaagtaatcgacataaatgaccactctccagcattcctagacaaagaaatcata
ctaaaaatatcagagagtagtctcccagggacttcatttccactgaagaatgctcaggat
atggatgtaggtgaaaacagtattgacaactatctcatcagttcaaattcctattttcat
gtactcacttgcaaacgcagcaatggcaagaaatatccagagctggtactggacagagca
ctggatagagaagaggaagctgagcttagattgatcctcatagcacaggatggtagctct
ccacctaggtctggtaccactgatgtccatgttgaagttgtggacatcaatgataatgct
cctcaatttgagcagcttttctacagggtacagttccctgaggacagtccagtaggcttt
ctagttgtcactgtctctgctacagataaagacataggaatcaatggagagatctcttat
tcattgttccaggcttcctatgacattagcaaaaccttttcaatccatccactgacaggg
gaagttcgattgaaagaacaacttgattttgaaagaactcagtcctatgaagtcaatatt
gaggcaagagatgctggaagcttttctggaaaatgcaccattctgacccaagtcgtggat
gtgaatgacaatgcaccagagattactatgtcagcatttaccagtcctgtccttgagaac
tcactggaaactatggttgcggttttcagtgtttcagatctagattccggagaaaatggg
aaaataagttgctacattcaggatgatctaccgtttttcctaaagtcttctgcagaaaac
ttctacaccctactaacagaaaagccactggacagagagagcagagccgaatacaacatc
accatcacagtcaccgacctgggcacacccaggctgaaaacccagcacaacatcactgtg
caagtctctgacgtcaacgacaacgcccccgccttcagccaagcctcctacaccatgtac
gtccccgagaacaacagccccgccctgcacataggcacagtcagagccacagactcagac
tcaggcgccaacgcccagctcacctactcgctgctgccgccccacgacccgcacctggcc
ctcgcctcgctggtgtccatcaacgccgacaacgggcagctgttcgccctcagggcgctg
gactacgaggccctgcaggccttcgagttccgcgtgggcgccgcagaccgaggctcgccc
gcgctcagcagccaggcgctggtgcgcgtgctggtgctggacgccaacgacaacgcgccc
ttcgtgctctacccgctgcagaacgcctctgcgccctgcaccgagctgctgcccagggcg
gccgagccgggctacctgctcaccaaggtggtggcggtcgaccgcgactcgggccagaac
gcctggctgtcgttccagctgctcaaggccaccgagccaggcctgttcggagtctggccg
cacaatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgcgcccaggcacagg
ctgctgctgctggtcaaggacaatggcgagccgccgcagtcggccagcgtcacgctgcac
gtgctgctggtggatggcttctcgcagccctacctgccgccgcccgaagtggcgcgccag
cccgcgcagcccgacgcgctcacgctctacctggtcatcgccttggcctcggtgtcttcg
ctcttcctcttctcgctgctgctcttcgtggccctcaggctgtgcaggaggaccaggccg
gcctctctgcctggcggctctgtgcctgagggccgctttctgggacagctgctggatgtc
agcggggcagggaccctgtcccacagctaccagtatgaggtgtgtctggcgggagactct
ggggctggcgagttcaaggtcttgaagccaattttacctaatttccaaggacattctccc
gtaccttaa
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