Nannospalax galili (Upper Galilee mountains blind mole rat): 103736470
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Entry
103736470 CDS
T03372
Symbol
Scaf4
Name
(RefSeq) SR-related CTD associated factor 4
KO
K13167
SR-related and CTD-associated factor 4
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngi03021
]
103736470 (Scaf4)
03041 Spliceosome [BR:
ngi03041
]
103736470 (Scaf4)
Transcription machinery [BR:
ngi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103736470 (Scaf4)
Spliceosome [BR:
ngi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
103736470 (Scaf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
103736470
NCBI-ProteinID:
XP_008834206
LinkDB
All DBs
Position
Un
AA seq
1151 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVAENATNNEGSPPPPGKVSSELPQATANSIPAVPQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTAPTQP
PEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEDSKTEDAVAISTAAPAAAAPPVPALA
TSAAAPAVPVPTASSPPPQAAFGFPGDGLQQPAYPQHQNMDQFQPRMMGIQQDPVHHQVP
LPPNGQMPGYGLLPAPPFPPMAQPVMAQPVIPPTPPGQQTFQPTFQPQNEPLAQKPHQQE
MEVEQPCIPEVKRHMSENRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHS
PRSRSQERRDREKERERRQKGLPQIKSETASVCSTTLWVGQLDKRTTQQDVASLLEEFGP
IESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYW
DVELGVTYIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTE
PVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGP
GVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINE
DTTKDLSIGNPIPTVVSGARGNAESGDSAKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQG
VAPGPVCGLQAPSTGLLGARPGMIPLQRPPGMPPPHLQRFPMMPPRPMPPHMMHRGPPPG
PGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQQQPQQQPPPQS
QPQQPPPSQQPPPAQQQQQPQQQQPQQFRNDNRQFNSGRDQERFGRRSFGNRVENDRERY
GNRNDDRENNSTRERREWGRRSPDRDRHRDLEERNRRSSGHRDRDRDSRDRESRREKEEN
RGKEKPEAIDRAGGNKAVEPPLSQVGNTDTVSELDKGETTAAGVKPEESPAEATSSVEAE
KNSGSAAEAPR
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaggagctgttttcacttatggatatgaaacctccc
atctctagagccaagatgattctcattactaaagctgctattaaggcaattaagctttat
aagcatgtagttcagatagtagaaaagttcatcaaaaagtgtaaaccagaatacaaggtt
ccaggattatatgtaattgactccattgtgagacagtctcgtcatcagtttggaactgat
aaagatgtttttgggccaaggttctctaaaaacataactgctacattccaatatttatac
ctttgcccatctgaagataagagtaaaatagttcgtgtgctgaatctttggcaaaaaaat
ggagtattcaaaattgaaattattcagcctcttttggacatggcagcaggaaccagtaat
gctgctccagtagcagaaaatgctaccaataatgaaggctcacctccacctccaggaaaa
gtttcttctgaactcccacaagccactgcaaattccatacctgctgtgccgcagttgccc
agctctgatgcttttgctgctgtggctcagctgtttcagacaactcaaggccagcaactt
cagcagatccttcagacctttcaacaacctccaaaaccacagtctcccgcccttgacaat
gctgtgatggctcaggttcaggctatcacagctcagttaaagacagctcctacacaacca
cctgaacaaaaagctgctttccccccacctgagcaaaaaactgcatttgacaagaagctg
cttgatagatttgattatgatgatgagccagaagctgtggaagactcaaaaacagaggac
gctgttgccatcagcactgcagctcctgctgctgctgcacctcctgtacccgctttggcc
acatctgctgctgctcctgctgtgccagtgcctactgcctcctctcctcctccacaggca
gcctttgggtttccgggagatggcttgcagcagccagcatacccacagcatcaaaatatg
gatcaatttcaacctcgaatgatgggaatccagcaagatccagtacatcatcaggttcca
cttcctcctaatggacagatgccaggatatggacttctccctgcgcctccctttcctcct
atggctcagcctgtgatggctcagcctgtaattcctccaactccaccagggcagcagact
ttccaacccacttttcagccacaaaatgagccacttgcacaaaagccacatcagcaggaa
atggaagtagaacagccttgtattccggaggttaagcggcatatgtctgagaacagaaag
tcaagatctaggtcagcatccaggtcaccaaagaggagacgatctagatcgggctctaga
tctcgaagatcccgtcaccgacgatctcgatctcggtccagggatagacgccgacactca
cctaggtctcgatctcaagaaagacgagatcgagaaaaggagagggaacgtcgacaaaag
ggtcttcctcaaatcaaatcggaaactgccagtgtttgtagtaccacactctgggtggga
cagctggacaaaaggactactcagcaggatgttgccagtctcttggaagagtttggtcca
attgaatcaattaatatgattcctccaagaggctgtgcttatatcgttatggttcatagg
caagatgcatatcgtgccctgcagaaactgagtcggggaaactataaagtgaaccagaaa
tccataaagattgcctgggccttaaacaaaggaataaaggcagattataaacagtattgg
gatgtagagcttggtgttacttatattccgtgggacaaagtcaaacctgaagaactggaa
agtttttgtgaaggaggaatgttggacagtgacacacttaacccagattggaaaggaatc
cctaagaagccagaaaacgaagttgctcaaaatggaggtgcagaaacctcccacacagaa
ccagtgtcacccatacctaaacctttgcccgtgcctgtccctcctattcctgttcctgca
cctataacagtgccacctccacaggtcccaccacatcagccaggtcctcctgtagtgggt
gccctccagccacctgctttcacgcctcctttaggaatcccccctccaggctttggtcct
ggagttcctcctcctccacctccaccaccgtttttgcgcccaggattcaacccgatgcat
ttacctccaggtttccttcctcctggacccccacctcctataactccaccagtttccatt
cctcctcctcacactccaccaataagcatcccaaactctactatcgctggtataaatgaa
gacactacaaaagacttatctattggaaatcccattccaacagtggtgtctggggctaga
ggaaatgccgagtctggtgacagtgcgaaaatgtatggctctgctgtgccacctgctgca
cccacgaatctgcccacccctcctgtaacccagcctgtttcacttcttggcactcaagga
gttgcacctggtcctgtatgtgggctccaggcaccatctactggtcttcttggtgcccga
cctggcatgatcccactccaacgtcccccaggaatgcctccacctcatttacagaggttt
cccatgatgccacctcgccccatgccaccgcacatgatgcacagaggtccaccaccagga
cccgggggcttcgcaatgcctccacctcatggaatgaaagggccctttccaccacatggc
cccttcgttaggcctggtggaatgccagggcttgggggtccagggccaggccccggaggt
cctgaagacagagatggacggcaacagcaacagccacagcaacaacctccaccacagtca
cagccacagcagccgccaccatcacaacagccaccaccagctcagcagcagcagcagccg
cagcagcagcagccacagcagtttagaaatgataacaggcagttcaattcaggtagagac
caagaaaggtttggaagaagatctttcggaaatagggtggaaaatgaccgggaacggtat
gggaaccgtaatgatgatagagagaataatagtacccgtgaaaggagagagtggggaagg
aggagccctgaccgggacaggcacagagacttggaagagagaaatagacgctctagtggg
catcgagacagagacagagattccagagatagagagtctcgtagagagaaggaagaaaat
cgaggaaaggaaaagccggaggcgatagatagggcaggtggtaacaaagccgtggaacct
ccccttagccaagtgggaaacacagacactgtttcagaacttgataagggggagaccacg
gccgcaggggtaaaacctgaagagtcgcctgctgaggctacctcatccgttgaagccgag
aagaattctggctcagcagccgaggctcctcgctag
DBGET
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