Nannospalax galili (Upper Galilee mountains blind mole rat): 103736671
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Entry
103736671 CDS
T03372
Symbol
Scn10a
Name
(RefSeq) sodium voltage-gated channel alpha subunit 10
KO
K04842
voltage-gated sodium channel type X alpha
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ngi04040
]
103736671 (Scn10a)
Ion channels [BR:
ngi04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
103736671 (Scn10a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
Na_trans_cytopl
GPHH
CcmD_alt
Lustrin_cystein
IQ
Motif
Other DBs
NCBI-GeneID:
103736671
NCBI-ProteinID:
XP_008834406
LinkDB
All DBs
Position
Un
AA seq
1958 aa
AA seq
DB search
MEFPFGSVKTTNFRRFTPESLAEIEKQIAAHRAAKKVKKKRREHKGQDEKPRPQLDLKAC
NQLPRFYGELPAELVGEPLEDLDPFYSTCRTFMVLNKGRTISRFSATRALWLFSPFNLVR
RTAIKVSVHSWFSIFITVTILVNCVCMTQADLPEKIEYAFTVIYTFEALIKILARGFCLN
EFTYLRDPWNWLDFSVITLAYVGAAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALI
HSVRKLADVTILTIFCLSVFALVGLQLFKGNLKNKCMKNNSTEPQEAANYSSQNAGNVFF
KIGTTDPLLCGNGSDAGQCPKGYTCLKTSDNPDFNYTSFDSFAWAFLSLFRLMTQDSWER
LYQQTLRASGKMYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIAEIEAKEKKFQE
ALEVLQKEQEVLVALGIDTASLHSHSGAPLASKNTHERKPKMKSRVSEGSADDNRSPRSE
PYNQRRMSFLGLSSGKRRSSHGSVFHFRAPTQDASFPDGITDDGVFHGDHENHRGSLLLG
RGAGQPGLLSRSPLPQSPNPGPRHGEERQLTVPTGELVPGATEVSAFDARQKKDYLSAEY
LNEPFRAQRAMSVVSIMTSVIEELEESKLRCPPCLINLAQKFLIWECCPKWMKLKTVLFE
LVTDPFAELTITLCIVVNTVFMAMEHNPMTTAFEHMLQVGNIVFTVFFTAEMVFKIIAFD
PYYYFQKKWNIFDCIIVTMSLLELSIAKKGSLSVLRTFRLLRVFKLAKSWPTLNTLIKII
GNSVGALGNLTFILAIIVFIFALVGKQLLGEDYRCKQDAITQPGDKQPRWHMWDFFHSFL
IIFRILCGEWIENMWACMQVSEKSICLILFLTVMVLGNLVVLNLFIALLLNSFSADNLTA
PEDDGEVNNLQVALARIQVFAHWAKQAISNYFSSCCRLPWPKVGPQLEVKPPLTNSKVEN
HIAVDVNASVENQIQPALNSPREDNSDFITNPNVWVSVPIAEGESDLDELEEDVEQDAQS
SWQDVSPKGQQEQLQQVERCEDHLGHRSPGSGMSSEDLAPYLGERWKEEATLQVPAEGVD
DTSSSEGSTVDCPDPEEILRKIPELADELEEPDDCFTEGCTRRCPCCKVNTSKFPWATGW
QVRKTCYRIVEHNWFESFIIFMILLSSGSLAFEDYYLKRKPRVESVLEYTDRVFTFIFVF
EMLLKWVAYGFKKYFTNAWCWLDFLIVNISLTSLIAKILDYSDVAPIKALRTLRALRPLR
ALSRFEGMKVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFWRCVNISSNPFS
VVNSTMVDNREDCRNQNYTGCFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAVDS
REVDNQPKWEDNIYMYLYFIVFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTEEQ
KKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIGIMVLICLNMITMMVETDE
QSKEKTEILARINQFFVAVFTGECVMKMFALRQYYFTNGWNVFDFIVVILSIGSLVFSAI
LTSLESYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMF
IYSIFGMSSFANVKNEAGIDDMFNFKTFGNSMLCLFQITTSAGWDGLLSPILNTGPPYCD
PTNANENGSHGNCGNPAVGIIFFTTYIIISFLIVVNMYIAVILENFNVATEESTEPLSED
DFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNQNILIQMDLPLVPGDKIH
CLDILFAFTKNVLGESGELDSLKANMEEKFMATNLSKASYEPIATTLRWKQEDISATVIQ
KAYRSYVLHRSLTLSSPLSVPRAEEDAVPLPNEGFVTFMANDDGGLPDKSETASATSFPP
SYDSVTRGLSDIVHISTSSSMQNEDETISKEENNPRAQ
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atggagttcccctttgggtccgtaaaaactaccaacttccgtcggttcactccagagtcg
ttggcagagattgagaagcaaatcgcggcccatcgggcagccaaaaaagtgaaaaaaaag
cgcagagagcacaaaggccaggatgagaagccgcggccccagctggacttgaaagcctgt
aaccagctgccaaggttctatggtgagctcccagcagaactggtcggggagcccttggag
gacctggacccattctacagcacatgccggacattcatggtgctgaataaagggaggacc
atttccaggttcagtgccactcgggctctatggctatttagtcccttcaacttggtcaga
agaacggccatcaaagtgtctgtccactcctggttctctatatttatcaccgtcactatt
ttggtcaactgtgtgtgcatgacccaagcagatctccctgagaaaattgagtacgccttc
actgtcatttacacctttgaagctttgataaaaatactggcaagaggattttgcctaaat
gagttcacttacctgcgagacccttggaactggctggacttcagcgtcattaccctggca
tatgttggtgcagcaatagatctccgaggaatctcaggcttgcggacattccgagttctt
agagctttaaaaacagtttctgtgatcccagggctgaaggtcattgtgggggccctgatc
cactcagtgaggaaactggctgacgtgaccatcctcaccatcttctgcttgagtgtcttt
gccttagtgggtctgcagctcttcaaggggaacctcaagaacaaatgcatgaagaacaac
agcacagagccccaggaggctgctaattactcatctcaaaatgcagggaatgtcttcttc
aagataggcactaccgatcccttactttgtggcaatggatctgatgctggccaatgccct
aagggatacacatgcctgaaaacttctgacaacccagatttcaactacaccagctttgat
tcctttgcatgggctttcctctcgctgttccgcctcatgacacaggattcctgggaacgc
ctctaccagcagacgctccgggcttctggaaaaatgtacatggtctttttcgttcttgtc
atcttcctggggtctttctacctggtcaacttgatcttggcggtggtcaccatggcatat
gaggaacagaaccaggcaacgattgcagaaattgaagccaaggagaagaagttccaagag
gcccttgaggtgctccagaaggagcaggaggtgctggtagccctggggatcgacacagcc
tctctccactcccacagtggagcacctttagcctccaaaaacacccatgagagaaagccc
aaaatgaaatcgagagtgtcagaaggctccgcagatgacaacaggtcaccccgatctgag
ccctacaatcaacgcaggatgtctttcctaggcctttcttctggaaaacgccggtctagc
catggcagtgtgttccatttccgagctcccacacaagatgcctcattccctgatggaatc
acagatgatggagtctttcatggagaccatgaaaaccaccgaggctccctactgctgggc
aggggtgctggacagccaggccttctctccaggagcccactgcctcagtcccccaaccct
ggtcccagacatggagaagagaggcagctcacagtgcccactggtgaacttgtgcctgga
gctactgaagtctcggcgtttgatgcaagacagaagaaggattacctgtcagcagaatac
ttgaatgagcctttccgagcccaaagagcaatgagcgttgtcagtatcatgacttccgtc
attgaggaactggaagagtctaagttgagatgtccaccctgcttgattaacttggctcag
aagtttctgatctgggaatgctgtcccaaatggatgaagctcaagacagttctcttcgag
ctggtgactgacccctttgctgagctcaccatcaccttgtgcatcgtggtgaacactgtc
ttcatggccatggagcacaaccccatgaccacagcctttgaacacatgctccaagttggc
aacattgtcttcactgtgtttttcactgccgaaatggtcttcaaaatcatcgccttcgac
ccctactattacttccagaagaagtggaatatcttcgactgtatcatcgtcaccatgagc
ctgctggagctgagcatagccaagaaggggagtttgtctgtgcttcggaccttccgcttg
ctgagagtcttcaagctggccaagtcctggcccaccctgaacacactcatcaagatcatt
ggcaactcagtgggggctctggggaacctgaccttcatcttggccatcattgtcttcatc
ttcgccctggttggaaagcagcttcttggagaggactaccggtgcaaacaggacgccatc
acgcagccaggtgataaacagccccgctggcacatgtgggacttcttccactctttcctc
atcatcttccggatcctctgcggagagtggattgagaacatgtgggcctgcatgcaagtc
agtgagaaatccatatgcctcatccttttcttgacggtgatggtgctggggaacctggtg
gtgctcaacctgttcattgccttgctgttgaactccttcagtgctgacaacctcacagcc
ccggaggatgatggggaggtgaacaacttgcaggtggcactggctcggatacaggtgttt
gcccattgggccaagcaggccattagcaattatttcagcagctgctgtcggctcccctgg
cctaaggtgggaccccagctggaggtgaaacccccactcaccaactccaaagtcgagaac
cacattgctgtggatgttaatgcttctgtggagaaccagatacagccagctctcaacagc
cccagggaagacaacagtgacttcatcactaatcctaatgtgtgggtctccgtgcccatt
gctgagggtgaatccgatctcgatgagttggaggaagatgttgagcaggatgctcagagc
tcctggcaggatgtgagccccaaaggacagcaggaacaactgcagcaagttgagaggtgt
gaggaccacctgggacataggagcccaggctctgggatgtcctctgaggacctggctcct
tacctgggtgagagatggaaggaggaagctacccttcaggtccctgctgagggagtggat
gacacgagctcttctgagggcagcaccgtggactgcccggatcctgaggagatcctaaga
aagatccctgagctggcagatgaactagaagaaccagatgactgcttcacagaaggctgt
acccgccgctgtccctgctgcaaagtaaataccagtaagtttccatgggccacgggctgg
caggtacgcaagacttgctatcgcatcgtggagcacaactggtttgagagcttcatcatc
ttcatgatcctgctcagcagtgggtccctggcctttgaagattactacctgaagaggaag
ccaagggtggagtctgtgctggagtacacggacagggtgttcaccttcatctttgtgttt
gagatgctgctcaagtgggtggcctatggcttcaaaaagtacttcaccaatgcctggtgt
tggctggacttcctcattgtcaatatctctctgacaagcctcatagcaaagattcttgat
tattcagatgtggcacccatcaaagctcttcggacactccgtgccctgaggccactgcgg
gctctgtctcgatttgaaggcatgaaggtagtggtggatgcactggtgggtgctatcccc
tccatcatgaacgtcctcctcgtctgcctcatcttctggctcatcttcagcatcatgggc
gtgaacctttttgcagggaaattttggaggtgtgtcaacatcagcagtaatccgttttct
gttgtgaattcaacaatggtggacaacagagaagactgtcggaatcaaaactacactggc
tgcttcttctgggtcaatgtgaaagtcaactttgacaacgttgcgatgggttaccttgca
cttcttcaggtggcaaccttcaaaggctggatggacattatgtatgcagctgttgattct
cgagaggtggacaatcagcccaagtgggaggataatatatacatgtacctgtacttcatc
gtcttcatcatcttcggaggcttcttcacactcaatctctttgttggggtcataatcgac
aacttcaatcaacagaaaaaaaagctagggggccaggacatcttcatgacagaggaacag
aaaaagtactacaatgccatgaagaagctgggctccaagaagccccagaagcccatccca
cggcccctgaacaagtatcagggctttgtctttgacattgtgaccagacaagcttttgac
attggaatcatggtcctcatttgcctcaacatgatcaccatgatggtggagactgatgag
caaagtaaggagaagacggagatcctggccagaatcaaccagttcttcgtggctgtgttc
acaggcgagtgtgtcatgaagatgtttgccttacggcagtactacttcaccaacggctgg
aatgtgttcgacttcattgtggtgatcctttccattgggagtctggtgttttctgcaatt
cttacatcacttgaaagttacttctccccgactctcttccgagtcatccgcctggcccga
atcggccgcatcctcaggctgatccgtgcggccaaggggatccgcacattgctctttgcc
ctcatgatgtccctgcccgccctcttcaacatcgggctcctgctgtttctcgtcatgttt
atctactcaatctttggaatgtccagctttgctaatgtcaagaatgaggctggcatcgat
gatatgttcaacttcaagacctttggcaacagcatgctgtgcctcttccagatcaccacg
tcagctggctgggatggtctcctcagccccatcctcaacacaggacccccctactgtgac
cccaccaatgccaacgaaaatggctcccatgggaactgtggaaacccagcagtgggcatc
atcttcttcaccacctacatcatcatctccttcctcattgtggtcaacatgtacattgca
gtgattctggagaatttcaacgttgccacagaggaaagcactgagcctctgagcgaggat
gacttcgacatgttctatgagacctgggagaaatttgacccagaggccacccagttcatt
accttttctgccctctcagactttgcagacactctctctggccctcttagaattcccaaa
cccaatcagaatatattgattcagatggacctgcccttggtccctggagataagatccac
tgcttagacatcctttttgccttcacaaagaatgtcttgggagaatctggggagttagat
tctctgaaagcaaatatggaagagaagtttatggcaactaatctttcaaaagcatcctat
gaaccaatagctaccaccctccggtggaagcaggaagacatctcagccactgtcattcaa
aaggcctatcggagctatgtgctgcaccgctccttgacactctccagccccctgagtgtg
cccagggctgaggaggatgctgtgcctctcccaaatgaaggctttgttacattcatggca
aatgatgatggtgggctcccagacaaatcagaaactgcatctgccacatctttcccacca
tcctatgatagtgtcaccagaggccttagtgacattgtccacattagcacatccagctca
atgcaaaatgaagatgaaaccatcagtaaggaagagaataatcccagagcacagtga
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integrated database retrieval system
