Nannospalax galili (Upper Galilee mountains blind mole rat): 103736720
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Entry
103736720 CDS
T03372
Symbol
Sox5
Name
(RefSeq) SRY-box 5
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngi03000
]
103736720 (Sox5)
Transcription factors [BR:
ngi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
103736720 (Sox5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
103736720
NCBI-ProteinID:
XP_008834454
UniProt:
A0A8C6QAW2
LinkDB
All DBs
Position
Un
AA seq
762 aa
AA seq
DB search
MLTDPDLPQEFERMSSKRPASPYGETDGEVAMVTSRQKVEGEDSEGLPAFHLPLPVSFPN
KPHSDEFQPVSLLTQETCGPRTPTSQHNAMEVDGNKVMSSLAPHNSSTSPQKAESGGQSG
ESVSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKEKLLAMG
SGNVGEIKGTPESLAEKERQLMGMINQLTSLQEQLLAAHDEQKKLAASQIEKQRQQMELA
KQQQEQIVRQQQQLLQQQHKINLLQQQIQVQGQLPLLMIPVFPPDQRTLAAAAQQGFLLP
PGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPIQLQQLYAAQLAAMQVSPAGKLPGIP
QGNLCAAVSPTSIHTDKSTNSPPPKSKDEVVQPLNLSAKPKTSDGKSPTSPTSPHMAALR
INSGAGPLKASVPAALASPSARVSTIGYLNDHDAVTKAIQEARQMKEQLRREQQALDGKV
AVVNSISLNNCRTEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESR
IYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLE
KQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFN
VGQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEPH
IKEEIQAEDINGEIYDEYDEEEDDPDVDYGSDSENHIAGQAN
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgctgactgaccctgatttacctcaggagtttgaaaggatgtcttccaagcgaccagcc
tctccgtatggggaaacagatggagaggtagccatggtgacaagcagacagaaagtagaa
ggagaggacagtgaggggctccccgcctttcaccttcccttgcctgtgagttttcccaac
aagcctcactctgacgaatttcagccagtttctctgctgacacaggagacttgtggccct
aggacccccacttctcagcacaacgcaatggaagtcgatggcaataaagttatgtcttcg
ttagccccacacaactcatctacctcacctcagaaggcagaaagtgggggacagagtgga
gagtccgtgtccagcacagccctgggcaccccggagcggcgcaagggcagcttagcagat
gtggtggataccttgaagcagaggaagatggaggagcttatcaagaatgagccagaagag
acccccagtattgaaaagctgctctcaaaggactggaaagagaaacttctggctatggga
tcagggaatgttggagaaataaaagggactcccgagagcctggctgagaaggagaggcag
ctcatgggcatgatcaatcagctgaccagtctgcaggagcaactcctggccgcccacgat
gaacagaagaagctagccgcctctcagattgagaagcaacggcagcagatggagctggcc
aagcagcagcaggagcagatcgtgagacaacagcaacaacttctccagcagcaacacaag
atcaacttgcttcaacagcagatccaggttcaaggtcagctgccgctattaatgattccc
gtgttcccgcctgaccagaggacgcttgctgctgctgctcaacagggattcctccttcct
ccaggcttcagctacaaggctggatgcagtgacccttaccctgttcagctgatcccaacc
actatggcagctgctgcagcagcaacaccaggcctaggcccaatccaactgcagcagtta
tatgctgcccagctagcggcaatgcaggtctctccagcagggaagctcccaggcatcccc
caaggcaacctctgtgctgcggtctctcctaccagcatccacacagacaagagcacaaac
agcccaccacccaaaagcaaggatgaagtggtacagccattgaacctctcagctaaaccc
aagacctctgatggcaaatcacccacatcacccacctctccccacatggcagctctgaga
ataaacagtggagcaggccccctcaaagcctctgtcccagcagcattagctagcccctca
gcgagagttagcacaataggttatttaaatgaccatgatgctgtcaccaaggcaatccaa
gaagctcgtcagatgaaggagcaactcaggcgggagcagcaggcgcttgatgggaaggtg
gctgtagtaaatagcataagtctcaacaactgccggacagaaaaggaaaaaacaacactg
gaaagtctgactcagcagctggcagtgaaacaaaacgaagaaggaaaatttagccatgca
atgatggatttcaatatgagcggagattctgatggaagtgctggagtttccgagtcaaga
atttatagggaatccaggggacgtggtagtaatgaaccccatataaagcgtccaatgaat
gccttcatggtgtgggctaaagacgaacggaggaaaatccttcaagcctttcctgacatg
cacaactccaacatcagcaagatactgggctctcgctggaaagctatgacgaacctggag
aaacagccgtactacgaagagcaggcccgactcagcaaacagcacctggagaagtaccca
gactacaagtacaagcccaggccgaagcgcacctgcctggtggacggcaagaaactgcgc
ataggggagtacaaggccatcatgcggaaccggcggcaggaaatgcggcaatacttcaac
gtcgggcaacaagcacagatccctattgccactgctggtgttgtgtacccgggagccatc
gccatggcaggcatgccatcccctcacctgccctcagagcactcgagtgtgtccagcagc
cccgaacctgggatgcccgtgattcagagcacttatggcgtgaagggagaggaaccacac
atcaaagaggagatccaggctgaggacatcaacggagagatttatgatgaatacgacgag
gaagaggatgaccccgacgtagattatgggagtgacagtgaaaaccatattgcaggacaa
gccaactga
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