Nannospalax galili (Upper Galilee mountains blind mole rat): 103736795
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Entry
103736795 CDS
T03372
Symbol
Scn11a
Name
(RefSeq) sodium voltage-gated channel alpha subunit 11
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ngi04040
]
103736795 (Scn11a)
Ion channels [BR:
ngi04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
103736795 (Scn11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
103736795
NCBI-ProteinID:
XP_008834558
LinkDB
All DBs
Position
Un
AA seq
1727 aa
AA seq
DB search
MEDRYYPMIFPDERNFRPFTSDSLAAIEKRLAIQKEKKKSKDKTVVEPHPRPQLDLKASR
KLPKLYGDIPRELIAKPLEDLDPFYRNHKTFMVLNKKRTIYRFSARRALFVLGPFNPVRS
LAIRISVHSLFSMFIICTVIINCGFMAHNGNKNSDTDVAELIFTGIYILEALIKILARGF
ILDEFSFLRDPWNWLDFVVIGTAIATYSPGTKINLSALRSFRVFRALKAISVVSGLKVIV
GALLRSVKKLVDVMVLTLFCLSIFALVGQQLFMGTLNQKCVKKNCGPNPLSNEYCFEREN
NSKEFIMCGNWFGSRPCPYNSECRNTSFNPDYNYTSFDNFGWSFLAMFRLMTQDSWEKLY
QQTLRTSGPYSVFFFVIVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETEAKERMFQEAQ
QLLKEEKEALVAMGIDRSSLNSLQASSFSPKKRKFFGNKTRKSFFMRGSKKDQTSGSDTD
EESSKNPQLLEQTKRLSQNLPVDLFDDHVDSFHRQRALSAVSILTITMQEQEKSQEPCLP
CGENLASKYLVWDCSPQWLCIKKVLRIIMTDPFTELAITICIIINTVFLAMEHYNMDKNF
SSVLRTGNWVFTGIFIAEMCLKILALDPYEYFRHGWNIFDSIVALLSLADVLYHLSHPNS
RSFLASFRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLTIVIFIFSVVGMQLFGS
RFCSQKIKNPCAAEESCRRRWHMGDFYHSFLVVFRILCGEWIENMWECMQEMEGSPLCII
VFVLIMVIGKLVVLNLFIALLLNSFSNEERDGNPEGQTRKTKVQLALDRFCQAFSLVVHT
LENFCCKRYRRQNATKQKEISGSSAAENKDILLDTEPWKKFDAQKSSDPGQDGVQLAPLA
EEEDDTEYSDEFDVLPTSQPEVQVCDLHQETKAPTSPDDQGVEIDVFSDDDTYLTIQSFR
KKSDAASVLSECSTIDLQDIFRHLQRTVPQKKQPERCLPKGISCRFLCQKWDRKKSPWAI
WWNLRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVYLPSRTHIKNLLNCTDNIFTFIF
ILEMILKWVAFGFRKYFTSAWCWLDFFIVIVSVVSLLNLKSLKSFRTLRALRPLRALSQF
EGMKVVVNALISAIPAILNVLLVCLIFWLIFCILGVYLFSGKFGRCVNGTDINKYMNHTI
ISNKNQCEFSNYSWKTPSVNFDNVGNAYLALLQVATYKGWLEIMNAAVDSTEIDNFNQQQ
KKISGQDIFMTEEQKKYYNAMKKLGTKKPQKPIPRPLNKCQGLVFDLVTNQVFDIFIMGL
IILNMIIMMAEYNGQPDEEKKIFDYLNIAFVVIFTLECLIKIFALRQYYFTNGWNLFDCV
VVVLSIISTMVSVLEKSEIPFPPTLFRIIRLARIGRILRLVRAARGIRTLLFALMMSLPS
LFNIGLLLFLVMFIYAIFGMSCFSKKVDQVSGIDDIFNFQTFSGSMLCLFQITTSAGWDA
LLKPMLESNTSPSSDSCQRPSIAIVYFVSYIIISFLIVVNMYIAVILENFNTATEESEDP
LGEDDFDIFYEIWEKFDPEATQFIKYSSLSDFADALPEPLRVAKPNKFQFLVMDLPMVID
DRLHCMDVLFAFTTRVLGNSSGLDTMKAMMEEKFMEANPFKKLYEPIVTTTKRKEEELCA
AIIQRAYRKHMEMIKLKLKDQLSSSLPTFCNGDLSSSEVAKVKVHYD
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaggtactacccaatgatcttcccagatgagcggaatttccgtcccttcact
tctgactctctggccgccattgagaagcggcttgccatccagaaggagaaaaagaagtcc
aaagacaagacagtagtcgagccccatcctcggccacagctggacctaaaggcctccagg
aagttaccaaagctttatggagacattccccgagagctgatagcaaagcctctggaagac
ttggaccccttctacagaaaccataagacatttatggtgctgaacaagaagagaacgatc
tatcgcttcagtgccagacgggccttgtttgttctggggcctttcaatccagtcaggagt
ttagccattagaatctcggtccattcgctgtttagcatgttcatcatttgcaccgtgatt
atcaactgtgggttcatggctcataatgggaacaaaaattcagacacagacgttgctgaa
ttaatcttcactgggatttatattttagaagctttgattaaaatattagcaagaggtttc
atcctggatgagttttccttccttcgagatccgtggaactggctggacttcgttgtcatt
ggaacagcgattgcaacttattctccaggtaccaaaatcaatctgtcagctctgcgttcc
ttccgagtgttcagagctttgaaagctatttcggttgtttcaggtctgaaagttattgtg
ggggccttgctgcgctctgtgaagaagctagtggatgtgatggtccttaccctcttttgc
ctcagcatttttgccctggtaggtcagcagctcttcatgggaaccctgaaccagaaatgt
gtcaagaaaaattgtggtcctaaccctttatctaacgagtattgctttgaaagggaaaac
aattccaaagagttcataatgtgtggcaactggtttggcagcagaccctgtccttataat
tctgagtgcaggaacaccagttttaatccagactataattacacaagttttgacaacttt
ggctggtcttttcttgccatgttccggcttatgactcaagattcctgggagaaactgtac
caacagactctgcggacatctgggccctactcagtcttcttttttgtgatagtcatcttc
ctgggctctttctacttgattaacttaactctggctgtcgtcaccatggcctatgaagag
caaaacaggaatgtagctgcggagacagaggccaaggagaggatgtttcaggaagcccaa
cagctattaaaggaggagaaagaggctctggttgccatgggaattgacagaagttcactt
aattcccttcaagcatcatccttttccccaaagaaaagaaagttttttggtaataagaca
agaaagtccttctttatgagaggatctaagaaagaccaaacttcaggatccgatacagat
gaagagtcctctaaaaatccacaactcctcgaacaaaccaaaagattgtcccagaacctt
ccagtggacctctttgatgatcacgtagactctttccacaggcagagggcactgagtgct
gtcagcatcctgaccatcaccatgcaggaacaagaaaaatctcaggagccttgtctccca
tgtggggaaaacctagcatccaagtatctggtgtgggactgtagcccccagtggctgtgc
ataaagaaggttctgaggattataatgactgacccttttactgaactggccatcaccatc
tgcatcataatcaacactgtcttcctagccatggaacactacaatatggataaaaatttt
agttccgtactgagaacaggaaattgggttttcacgggcatttttatagcagaaatgtgc
ctaaaaatccttgccctggacccttacgagtactttcgccacggctggaatatttttgac
agcatcgttgcccttctgagcctcgcagatgtgctgtaccacctgtctcacccaaacagt
cggtcattcttggcttccttcagagtgctgagggtcttcaagttagccaaatcctggcca
acattaaacaccctaattaagatcatcggccactccgttggagcgcttggaaacctgacc
gtggtcctgaccattgtgattttcatcttttcagtcgttggcatgcagctttttggctct
aggttctgttctcaaaagattaaaaatccctgtgctgcagaggagtcatgtcgccggcgc
tggcacatgggggatttctatcactccttcctggtggtgttccgcatcctctgcggggaa
tggatcgagaacatgtgggaatgcatgcaggagatggaggggtctccactgtgcatcatt
gtctttgtgttgatcatggtgataggaaaacttgtggtgctcaacctgttcattgccttg
ctgctcaattccttcagcaatgaagagagagatggaaacccagaaggacagaccaggaaa
accaaagtccagctggccctggatcggttctgccaggctttttctcttgtagtacacact
cttgagaatttctgttgcaagagatataggagacaaaacgcaacaaagcaaaaagagatc
tcaggaagctctgctgcagagaacaaagatattcttctggacacagagccctggaagaaa
tttgatgcccaaaagagctcggacccaggccaagatggggttcagttggccccacttgcg
gaagaagaggatgacactgaatattctgatgaatttgatgtcctgcccacctcacaacct
gaagttcaggtctgtgacctccatcaagagaccaaggcgcccaccagcccagatgatcaa
ggtgtggaaattgatgtgttttctgatgatgacacctatttaaccatacagagtttcaga
aagaagtctgatgctgcaagtgtgctctcagaatgcagcacgattgacctgcaggacatc
ttcaggcatttacagagaacggtcccacaaaagaagcagccagagagatgcttgcctaaa
ggcatcagttgtcgctttctctgccaaaagtgggacaggaaaaagtccccctgggccatt
tggtggaatttgcggaaaacctgttaccaaatcgtgaagcacagctggtttgagagcttc
atcatctttgtgatcctgctgagcagtggggcactgatatttgaagatgtttatcttcct
agtcggactcatatcaaaaacttactaaactgtactgacaacattttcaccttcattttc
attctggagatgattctgaaatgggtggccttcggatttaggaagtatttcaccagtgcc
tggtgctggcttgatttcttcattgtaattgtgtctgttgtcagtctcttgaatctaaag
agcttgaagtccttccgcactctgcgagcactgaggcctctgcgggcactgtctcagttt
gaaggaatgaaggtggtggtgaatgctctcatcagtgccatacctgccattctgaacgtc
ttgctggtctgtctcattttctggctcatattttgcatcctgggagtatatttattttct
ggaaagtttggaagatgtgttaatgggacagatataaataaatatatgaatcataccatc
atttcaaacaaaaaccaatgtgaatttagcaattattcctggaaaaccccaagcgtcaac
tttgacaacgtggggaatgcttaccttgctctgctacaagtggcaacatataaaggctgg
ctggagattatgaatgcagctgttgattccacagagattgacaacttcaaccaacagcag
aaaaagataagtggccaggacatttttatgacagaagaacagaagaaatactataatgca
atgaaaaaattaggaaccaaaaaacctcaaaaacccatcccaaggcctctgaacaaatgt
caaggccttgtattcgacctggtcacgaatcaggtgtttgacatcttcatcatgggtctc
attatcctaaacatgatcatcatgatggctgaatataatggccagcctgacgaagagaaa
aaaatctttgattatctcaacatagcctttgtggtcatctttacactagagtgtctcatc
aaaatctttgctttgaggcagtactacttcaccaatggctggaatttatttgattgtgtg
gtcgtggtcctttccatcattagtaccatggtttctgtgttggagaaaagcgaaattcct
ttcccaccaactctcttcagaatcatccgcttggcccggattggccgaatcctcagactt
gttcgagcagcacgaggcatcaggaccctcctctttgctctgatgatgtcccttccctct
ctattcaatattggtctgcttctctttctggttatgttcatttatgccatctttgggatg
agctgtttttccaaaaaggttgatcaagtttctggaatcgatgacatctttaacttccag
actttttccggcagcatgctctgtctcttccagataaccacttcagctggctgggatgct
ctcctcaagcccatgctggagtcgaacacctcccctagctcagacagctgtcagcggccg
agtatagccatagtttacttcgttagctacatcatcatctcttttctcatcgtggtcaat
atgtacattgctgtgatcttagagaacttcaataccgccacggaagaaagcgaggaccct
ttgggtgaagatgactttgatatattctacgaaatctgggaaaagtttgaccctgaagca
acacagtttatcaaatattcttccctttctgattttgctgatgccctgcctgagcctttg
cgtgtggcaaaacccaacaagttccaatttctagtaatggacttgcccatggtgattgat
gaccgcctccactgcatggatgtcctctttgcctttaccactagggtacttggtaactcc
agtggcctggataccatgaaagcgatgatggaggagaagttcatggaagccaatcccttc
aagaagttgtacgaacccatagtcaccaccacgaagaggaaggaagaggagctgtgtgct
gcgattattcagagggcctatcgcaaacacatggagatgatcaagttgaagttgaaagac
cagttaagttcatcactcccgacattttgcaatggagatttgtctagctctgaggtagct
aaagtcaaggttcattatgactga
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integrated database retrieval system
