Nannospalax galili (Upper Galilee mountains blind mole rat): 103736936
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Entry
103736936 CDS
T03372
Symbol
Zswim8
Name
(RefSeq) zinc finger SWIM-type containing 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngi04121
]
103736936 (Zswim8)
Ubiquitin system [BR:
ngi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
103736936 (Zswim8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
Motif
Other DBs
NCBI-GeneID:
103736936
NCBI-ProteinID:
XP_008834789
LinkDB
All DBs
Position
Un
AA seq
1906 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTGGGGG
GGGGGSRMRDGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDI
RLYSCLANGSADEFQRGDQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDR
CRVTSCSCTCGAGAKWCTHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLI
SELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLTDNIKK
TLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFKR
RDSNAAPLLEILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMC
DEMVTLWRLAVLDPALSPQRRRELCAQLRQWQLKVIENVKRGQHKKTLERLFPGFRPAVE
ACYFNWEEAYPLPGVTYSGTDRKLALCWARALPPRPGASRSGGLEESRDRPRSLPNEPAV
RPKEPGPKRKGLGEGVSSSQRGPRRLSAEGGDKALHKIGPGGGKAKVLGGAGSGGKGSAG
SGSKRRLSSEDSSLEPDLAEMSLDDSSLALGAEASTFGGFPESPPPCPPSVGSRGPSTFL
PEPPDTYEEDAGVYFSEGPEPPTASAGPPGLLPGEVCTRDDLPSTDESGSGCPKTKEAAP
AVGEEDDDYQAYYLNAQDGAGGEEEKAEGGAGEEHDLFAGLKPLEQESRMEVLFACAEAL
HAHGYSNEASRLTVELAQDLLANPPDLKVELPPAKGKKNKVSTSRQTWVATNTLTKAAFL
LTVLSERPEHHNLAFRVGMFALELQRPPASTKALEVKLAYQESEVAALLKKIPLGPSEMS
TMRCRAEELREGTLCDYRPVLPLMLASFIFDVLCAPVVSPTGSRPPSRNWNNEMPGDEEL
GFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQAKLKKILDKLLDRE
SQTHKPQTLSSFYSSSRPATASQRSPSKHGAPSAPGALQPLTSGSAGPAQPGNVAGAGPG
PTEGFTEKNVPESSPHSPCEGLPPEAALTPRPEGKVPSRLALGSRGGYNGRGWGSPGRPK
KKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSS
SGSRRASASGGARAKTVEVGRCYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGG
NSSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQ
AMEIGSAALTILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNP
NEIQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWFWLYEQTAGGSSTA
REGATSCSGSGMRAAGEAGRGLPESRGTPGTEPVTVAAAAVTAAATVVPVISVGSSLYPG
PGLGHGHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHMPRPAVFPVPSSAYPQGVHP
AFLGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACELWGQGAVSS
VHPASTFPAIQGASLPALTTQPSPLVSGGFPPPEEETHSQPVNPHSLHHLHAAYRVGMLA
LEMLGRRAHNDHPNNFSRSPPYTDDVKWLLGLAAKLGDRHGDAAAADPHSCPQPPACPGL
PPAGAALPAGIHAVHPSPLNSPDPCRLRRLCECDPQCPQRLLPDTHGHDAVQRHSAEPQT
QQTDQGVVAAGLSRDDHLLPLSLAPLAPYMGTQTCGYGGPSHRGSDSWLDRSSPLSSLVA
QTGSCSWAVAWGQNVSDLRSLGPGETAFSGRERWVASGIYLAFINI
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atggagctgatgtttgcggagtgggaggacggtgagcgcttctcgttcgaggattccgac
cgctttgaggaggattcactgtgttccttcatctctgaggccgagagcctttgccagaac
tggcgaggatggcgcaagcagtccgcggggcccaactcccccacgggcggcggtggcggc
ggaggcggtggcggttcgagaatgcgagatggactggtaatcccattggtggagctgtca
gcaaagcaggtggcgtttcacatcccatttgaagtagtggagaaagtttatcccccagta
cctgaacagctccagctccgaattgctttttggagcttccctgagaatgaagaggacatt
cggctatactcatgcctagccaatggcagtgcagatgagttccagcggggggatcagctg
ttccgcatgagggctgtgaaggacccactgcagatagggttccatctgagtgctacagtg
gtgccacctcagatggtccctcccaaaggggcctacaatgtggctgtgatgtttgaccgc
tgccgggtcacttcctgcagctgtacctgtggggctggggccaaatggtgcacccatgtc
gtggcactctgtctcttccgcatccacaacgcttctgcagtctgccttcgggccccagtc
tcagagtccctgtctcggctacaaagggaccagcttcagaagtttgctcagtaccttatc
agtgagctccctcagcagattcttcctacagcccagcgtctcctagatgagctcctctcc
tcccagtcaacagctatcaacacagtgtgtggagccccagaccccacagcagggccctca
gcttcagaccagagcacttggtatttggatgagtcgacactcactgataacatcaagaag
acactgcacaagttctgtggtccctcccctgtggtcttcagtgatgtgaattccatgtat
ctgtcatccacggagcctccggcagctgctgaatgggcatgtctactgcgccctctgaga
ggccgagagcctgagggtgtatggaacctgcttagcattgtccgggagatgttcaagcgg
agggacagcaatgctgccccgttgctggaaatactcactgaccagtgcctcacttatgaa
cagataacaggttggtggtacagtgtgcgcacttcagcttcacacagcagtgccagtggg
cacacaggccgtagcaatgggcagtcagaggtagcggcccatgcatgtgcaagcatgtgt
gatgagatggtcacactgtggaggctggccgtgctggaccctgcccttagccctcagcgc
cgccgggaactgtgtgcacagctgcggcagtggcaactgaaggtgattgagaatgtcaag
cggggacagcacaagaagaccctggagcggcttttccctggcttccggcccgcagtggaa
gcctgctactttaactgggaagaggcctacccacttcctggtgtcacctacagtggcact
gaccggaagctagccttgtgctgggctcgggccctgccccctcggccaggagcctctcgc
tctgggggcctggaagagtcccgggatcggccccgatctcttcctaatgagccagctgtg
aggcccaaggaacctgggcccaagcgcaagggattgggtgagggggtctcctcatcacag
cggggcccacgtcgcctctctgctgaaggcggagataaggctctgcataagattggtcca
ggtgggggcaaagccaaggttctgggtggggctggcagtgggggcaagggttcagcaggc
agtgggagcaagcgaaggctaagcagtgaagatagctccctggaacctgatctggcagag
atgagcctggatgacagcagcttggccctgggtgcagaggccagcacctttggtggattc
cccgagagtcctccaccctgtcctccctctgttggctcccggggaccttccaccttcctt
cctgagcccccagatacttatgaagaagatgctggtgtatacttctcagaagggccagag
cctcccacagcctctgctgggccccctggcctcctgcctggggaagtctgtacccgagat
gacctcccttctacagacgagagtggcagtgggtgccccaaaaccaaagaagcagcccct
gcagttggagaggaagatgatgactaccaagcatattacttgaatgcccaggacggggct
gggggcgaggaagagaaggcagagggtggggctggagaggaacacgacctgtttgctggg
ttgaagccattggaacaggagagccgcatggaggtattatttgcctgtgctgaggccctg
catgcccatggctacagcaatgaggcctcccgcctcactgtggagcttgcccaggatctg
ctagccaacccacccgacctcaaggtagagctgcctcctgccaagggcaagaaaaataaa
gtatccacaagccgtcagacctgggtagctaccaacaccttgaccaaggcagccttcctg
ttgacagtgcttagtgagcgcccagagcaccacaacctggccttccgagttggcatgttt
gccttggagctacagcggccccctgcttctaccaaggccttggaggtaaagttggcatac
caggaatctgaggtggctgctttgcttaagaagatccctctgggtcccagtgaaatgagc
accatgcgatgccgggcagaagaacttcgggagggcacactctgtgactatcggcctgtt
ttgcccctcatgttggccagtttcatctttgatgttctctgtgctccagtggtttctcct
acgggttcccggcccccaagtcgcaactggaataatgagatgcctggagatgaggagctg
ggatttgaagcagcagttgctgccttaggcatgaagacaacagtgagtgaggcagaacat
cccctcctgtgtgaaggcacacgtcgggagaagggtgacctggcattagcactcatgatc
acttacaaggacgaccaggccaagctcaagaagatcttagacaaactcttggaccgagag
agccagacacataaaccacagacgctgagttcattctactcatctagccgtccagctaca
gccagccagaggtctccatcaaagcatggggctccatctgccccaggggctctgcagcca
ctgacttcaggctctgcagggcctgctcagccagggaatgtggcaggggctgggccaggt
cccactgagggcttcacagagaagaatgtgcctgaaagctcaccacattccccctgtgag
ggtctcccacctgaggcagctttgactccaagaccagaggggaaggttcccagccgccta
gctcttggcagtcgtggaggctataatggacggggatggggctccccagggcggcctaaa
aaaaagcacacaggcatggccagcattgacagcagtgctcctgaaactacgtcggacagc
tctcctaccttaagccgaaggccacttcgaggtggctgggcccccacttcctggggtcga
ggacaagacagtgacagcattagcagctcttcctctgactccctgggctcctcatcctcc
agtggaagtcgtcgggctagtgccagtggaggggcccgggcaaagacagttgaagttggc
aggtgttacaagggccgccgcccggagagtcatgccccccacgtacccaatcaaccatca
gaggcagctgcacacttctacttcgagttggcgaagacagttctgatcaaggcagggggc
aacagcagcacttccatttttacacatccatcttcctcagggggccaccagggtcctcac
cgcaacctgcacctttgcgcctttgagattgggctttatgcccttggcctgcacaacttt
gtttctcccaactggctctcacgtacctattcttcccatgtttcctggattacagggcag
gcaatggagattggcagtgcagccctgactatactggtagagtgttgggatgggcacctg
acgccccctgaggtcgcatctctggctgatagagcatcacgggcacgagactccaatatg
gtgagggcagcggcagagctggctctaagctgcctgcctcatgcccatgcattgaacccc
aatgaaatccaacgggccttggtgcagtgcaaggaacaggataacctgatgttggagaaa
gcctgcatggcagtggaagaggcagctaagggtgggggtgtataccctgaagtgttgttt
gaggttgctcaccagtggttttggctatatgagcaaacagcaggcggctcatccacagcc
cgtgaaggggctacaagctgtagtggcagtgggatgagggcagctggggaggctgggcgg
gggctgcccgagagcagggggaccccagggactgaacctgtcacggtagcagcagcagca
gtaacagcagcagccacagtggttccagtcatctcagtggggtccagtttatatccgggt
ccaggactggggcatggtcactcccctggcctgcacccctacactgctctacagccccac
ctgccctgcagccctcagtacctcacccacccagctcaccctgcccaccctatgcctcat
atgccccggcctgccgtcttccctgtgcccagctctgcatacccacagggtgtgcatcct
gcattcctgggggctcagtacccttactcggtgactcctccctcacttgctgccacggct
gtgtctttccctgtcccttccatggctcccatcacagtccatccctaccacacagagcca
gggcttccactgcccaccagtgtggcctgtgagttatggggacagggagcagtgagcagt
gtccatccagcatccacatttccagccatccagggtgcctcgctgcctgctttgaccaca
cagcccagccctctggtgagcgggggttttccaccacccgaggaggagacgcacagtcaa
cctgtcaatccacacagcctgcaccacctgcatgctgcttaccgtgttggaatgctggca
ctggagatgctgggtcgccgggcacacaatgatcaccccaacaacttctcccgctccccc
ccctacactgatgatgtcaaatggttgctggggctggcagcaaagctgggagatcgtcat
ggagacgctgcagcggctgacccccactcatgcccacaaccccctgcgtgccccggcctt
ccaccagctggtgcagcgctgccagcaggcatacatgcagtacatccatcaccgcttaat
tcacctgacccctgccgactacgacgactttgtgaatgcgatccgcagtgcccgcagcgc
cttctgcctgacacccatgggcatgatgcagttcaacgacattctgcagaacctcaaacg
cagcaaacagaccaaggagttgtggcagcgggtctctctagagatgaccaccttctcccc
ctgagtctggcccctctagcgccctatatggggacacagacctgtggctatgggggccct
tcacacagagggagtgactcttggctggacagatcatccccactcagttctctggtggcc
cagactggcagctgctcttgggctgtagcttggggccaaaatgtctcagaccttagaagc
ctagggccgggggagacagccttttctgggagggagcgttgggtggcctctggtatttat
ttggcatttataaatatataa
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