Nannospalax galili (Upper Galilee mountains blind mole rat): 103737503
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Entry
103737503 CDS
T03372
Symbol
Dhx15
Name
(RefSeq) DEAH-box helicase 15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103737503 (Dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngi03041
]
103737503 (Dhx15)
03009 Ribosome biogenesis [BR:
ngi03009
]
103737503 (Dhx15)
Enzymes [BR:
ngi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103737503 (Dhx15)
Spliceosome [BR:
ngi03041
]
Complex A
U2 snRNP components
U2 related factors
103737503 (Dhx15)
Complex B
103737503 (Dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
103737503 (Dhx15)
Ribosome biogenesis [BR:
ngi03009
]
Eukaryotic type
90S particles
Helicases
103737503 (Dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Atrophin-1
AAA_29
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
103737503
NCBI-ProteinID:
XP_008835549
UniProt:
A0A8C6RDH4
LinkDB
All DBs
Position
Un
AA seq
795 aa
AA seq
DB search
MSKRHRLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKE
LRASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHSAHSTHTGHAGHTSLPQCINPFTN
LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS
LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM
LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF
QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE
EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF
VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV
RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ
LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL
DRIIAKLQSKEYSQY
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggcatcggttggacctgggggaagactacccctccggcaagaagcgtgcg
gggaccgatgggaaagaccgggatcgagatcgggatcgtgaggatcgatctaaagaccga
gatcgagagcgtgatagaggagatagagaacgggagagggagaaagaaaaggaaaaggaa
ttgcgtgcttccaccaacgccatgcttatcagtgccgggttaccacctttgaaagcttcc
cattcagctcactcaacccactcggctcattcaacacattctacacattctgcccattca
acacacactggacacgcaggacacacgtcacttccacagtgcattaacccatttaccaac
ttaccacatactcctcgatactatgatattctaaagaaacgacttcagctccctgtttgg
gaatacaaggataggtttacagatattcttgttaggcatcagtcatttgtactggttggt
gaaactgggtctggtaaaacaacacagataccacagtggtgtgtggaatatatgcgatca
ttgccaggcccgaaacgaggagttgcctgtacccaacccaggagggtagctgccatgagt
gtggctcagagagttgctgatgagatggatgtgatgttgggccaggaagttggctactcc
attcgatttgaagactgcagtagtgcaaaaaccattcttaagtatatgactgatgggatg
ctacttcgagaagctatgaatgatccgcttctggagcgatatggtgtaataattcttgat
gaggctcatgaaagaacattggctacagatattctcatgggtgttctgaaggaagttgta
agacagagatcagatttaaaggttatagttatgagtgctaccctagatgcaggaaaattc
cagatttactttgataattgtcccctcctaactattcctggccgcacacatcctgttgag
attttttatactccagaaccagagagagattatcttgaagcagcaattcgaacagtgatc
cagatacacatgtgtgaagaagaggaaggggatcttctgcttttcttaactggtcaagag
gaaatcgatgaggcctgtaagagaataaagcgtgaagttgatgatttgggccctgaagtt
ggtgacattaaaatcattccattgtactccacgcttccaccccagcagcagcagcgcatt
tttgagccaccacctcccaaaaaacagaatggagcaattggaagaaaggtagttgtgtca
actaacattgcagaaacatctttgacaatagatggtgtggtgtttgtgattgatcctgga
tttgcaaaacaaaaggtatataatcctagaatcagagttgagtctctcttggtgacagct
atcagcaaagcttcagctcaacaaagagcaggtcgagctggacgtaccagacctgggaaa
tgcttcaggctctacacagagaaagcttataaaacagaaatgcaggataacacctatcct
gagattttgcgctctaatttaggatcagttgtattacagttgaagaaacttggtattgat
gatttggtgcatttcgattttatggatccaccagctcctgaaactctgatgagagcccta
gaacttttgaattatttggctgctttaaatgatgatggagatctgactgaattgggatcc
atgatggcagagtttcctctcgatccacagctcgctaaaatggttattgcaagttgtgac
tacaactgttctaatgaggtcctatctattactgctatgttgtcagtcccacagtgtttt
gttcgccccacggaggccaagaaagctgcagatgaggccaagatgagatttgcccacata
gatggagatcatctgacactgctgaatgtctaccatgcttttaaacaaaaccatgaatcg
gttcagtggtgttatgacaacttcattaactaccggtccctgatgtctgcagacaatgta
cgccaacagctatcacgaattatggacagatttaatttgcctcgtcgaagtactgacttt
acaagcagggactattacattaatataagaaaagctttggttactgggtattttatgcag
gtggcacatttagaaagaacagggcattacttaactgtgaaagataaccaggtggttcag
ttgcatccttctactgttcttgatcataagcctgaatgggtgctttataatgagtttgtg
ctaacaacaaagaattacatccggacatgtacagacatcaagccagaatggttggtgaaa
attgcccctcaatattacgacatgagcaacttcccacagtgtgaagcaaagagacagttg
gaccgcattattgccaaacttcaatccaaggaatattcacagtactga
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