Nannospalax galili (Upper Galilee mountains blind mole rat): 103737725
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Entry
103737725 CDS
T03372
Symbol
Dicer1
Name
(RefSeq) dicer 1, ribonuclease III
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
103737725 (Dicer1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngi03036
]
103737725 (Dicer1)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103737725 (Dicer1)
microRNA pathway
RISC loading complex
103737725 (Dicer1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
DEAD
ResIII
Cas3-like_C_2
DSRM_2
Motif
Other DBs
NCBI-GeneID:
103737725
NCBI-ProteinID:
XP_008835795
LinkDB
All DBs
Position
Un
AA seq
1934 aa
AA seq
DB search
MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLTKELSYQIRGDLSPDGKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSNLEVNASWTKERWNQEFAKHQVLIMTCCVALNVLKNGYLSLSDINLLVFDECHLA
ILDHPYREIMKLCESCPSCPRILGLTASILNGKCDPEELEEKIQKLEEILKSNAETATDL
VVLDRYTSQPCEIVVDCGPFTDRSGLYERLQMELEEALNFINDCNVSVHSKERDSTLISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRRFLLFTDTLLRKIHALCE
EYFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKSQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDGGEAD
VDAVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPD
GTFYSTLYLPINSPLRASIVGPPMGCVRLAERVVALICCEKLHKIGELDEHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRGSYPKAGQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGELTVSIELRKSAFTLSQ
QMLDLVTRLHQYIFSQILRLEKPALEFKPIGADSAYCVLPLNVVHDSSTLDIDFKFMEDI
EKSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTAGDAGV
GVRSLPVDFRYPNLDFGWKKSIDSKSFISVSNSSLAENDNYCKHSTIVVPENAAHQGANR
TSLENHDQMSVNCRRLPAEPPGKLQIEVSTDLTAINGLSYNKNLANGSYDLANRDFCQGN
QLNYYKQEIPVQPTTSYPIQNLYSYENQPKPSDECTLSNKYLDGNANTSTSDGSPVVSVM
PGTTDAVKAPKDRMDSEQSPSAGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGDS
FLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWL
PPGYVVNQDRSSTDKREKEEMTKDCLLANGKLGEDCEEEEDEEDEEDEEDEEEEDEEEED
LPWRAPKEEAEFEDDFLEYDQEHIQFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKK
SSLGNMPFSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISY
DLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTGGEKALCPA
QGTLSSQQKGLSGGCTDATGPCSSAGKDLEYGCLKIPPRCMFDHPDAEKTLSHLISGFEN
FEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHS
PGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSE
LRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSAN
VPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRA
LRSLKANQPQVPNS
NT seq
5805 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcaacccctcagcatggcaggcctgcagctcatgacccctgct
tcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatgataac
atttatacgccaagaaaatatcaggttgaactgctggaagcagctctggatcataacacc
attgtctgtttaaacactggctcagggaagacgtttattgcagtactactcactaaagag
ctgtcctatcagatcaggggagacctcagcccagacggaaaaaggaccgtgttcctggtc
aactctgcaaaccaggttgctcaacaagtgtcagctgtcagaactcactcagatctcaag
gttggggaatactcaaacctagaagtaaatgcatcttggacaaaagagagatggaaccaa
gagtttgctaagcaccaggttctcattatgacttgctgcgtcgccttgaatgttttgaaa
aatggttacttatcactgtcagacattaaccttttggtgtttgatgagtgtcatcttgca
attttagaccacccttatcgagaaattatgaagctctgtgaaagttgtccatcatgccct
cgcattttgggactaactgcttccattttaaatgggaaatgtgatccagaggaattggaa
gaaaagattcagaaactggaggaaattcttaagagtaatgctgaaactgcaactgacctg
gtggtattagacagatacacttctcagccgtgcgagattgtggtagattgtggaccattt
actgacagaagtgggctttatgaaaggctgcagatggaattagaagaagcacttaatttt
atcaatgactgtaatgtatctgtacattcaaaggaaagagattctactttaatttctaaa
cagatcctgtcggactgccgagcagtcttggtggttctggggccctggtgtgcagacaaa
gtagcaggaatgatggtgagagagcttcagaaatacatcaaacacgagcaggaggagctg
cacaggaggttcttgttgtttacagacactttgctaaggaagatacatgcactatgtgaa
gagtacttctcacctgcctctcttgacctgaaatttgtaactcccaaagtaataaaactg
cttgaaatcttgcgcaaatataaaccgtatgagcgacagcagtttgaaagtgttgagtgg
tataataataggaatcaggataattatgtgtcttggagtgattctgaggatgatgatgag
gatgaagaaattgaagaaaaagaaaagccagagacaaattttccttctccatttaccaat
attttatgtggaattatttttgtggaaagaagatacactgcagttgtcctaaacagattg
ataaaggaagctggcaaacaagatccagagttggcttatatcagcagcaacttcataact
ggacacggcattgggaagagccaacctcgaaacaaacagatggaagcagaatttagaaag
caggaagaggtacttaggaaatttcgagctcatgaaaccaacctgcttattgcaacaagt
attgtagaagagggtgttgatataccaaaatgcaacttggtggttcgttttgatttgccc
acagagtatcgatcctatgttcaatctaaaggaagagcaagagcaccgatctctaattat
gtaatgttagcagatacagacaaaataaagagttttgaagaagaccttaaaacttacaaa
gctatagaaaagatcttaagaaacaaatgttccaagtcagtggatggtggtgaggctgat
gttgatgctgttgtggatgatgatgatgttttcccaccatatgtgttgaggcctgatgat
gggggtccacgagtcacaatcaacactgccattggacatatcaatagatactgtgctcga
ttaccaagtgatccgtttactcatctagctcccaaatgtagaacccgagagttgcctgat
ggtacattttattcaactctttatcttccgattaactcacctcttcgagcctccattgtt
ggcccaccaatgggctgtgtacgattggctgaaagagttgtagctctcatttgctgcgaa
aaactgcacaaaattggtgagctggatgaacatttgatgccagttgggaaagagactgtt
aaatatgaggaagagcttgacttacatgacgaagaagaaaccagtgttcctggaagacca
gggtccacaaagcgaaggcagtgctaccccaaagcaattccagagtgcttgaggggtagt
taccccaaagctggccagccttgttacctgtatgtgataggaatggtcctaacgacccca
ctccctgatgagctcaacttcaggaggcggaagctctaccctcccgaggataccaccaga
tgctttgggatactgacagccaaacccatacctcagatcccgcactttcccgtgtataca
cgctctggggagctcaccgtatccatcgagctgaggaagtctgctttcacactgtcccaa
caaatgcttgacttggttacgaggcttcaccagtatatattctcacagattcttcggctg
gagaaacccgcactagagttcaaacctataggcgctgactcagcatactgtgttctacct
cttaacgttgttcatgactccagcactttggacattgactttaaattcatggaggatatc
gagaaatctgaagctcgtataggcattcccagtacaaagtattcaaaagaaacaccattt
gtttttaaattagaagattaccaagatgcagttatcattccaagataccgaaattttgat
cagcctcatcgattttatgtagctgatgtgtacactgaccttaccccactcagtaaattt
ccttcccctgagtatgaaacttttgcagaatattataaaacaaagtataaccttgacctg
accaatctcaaccaaccactgctggatgtggaccacacatcttccagacttaatcttttg
acacctcgacatttgaatcagaaggggaaagcacttcctctaagcagtgctgaaaagagg
aaagccaaatgggaaagtctgcagaataaacagatactagttccagaactctgtgctata
catccaattccagcatcgctgtggagaaaagcagtttgtctccccagcatactttatcgc
cttcactgccttttgactgcagaggagctaagagcccagacagctggagatgctggtgtg
ggtgtcagatcacttcctgtggattttagataccctaatttagacttcgggtggaaaaaa
tctatcgacagtaagtctttcatctcagtttctaactcctctttggctgaaaacgataat
tactgtaagcacagcacaattgtagtccctgaaaatgctgcacatcaaggtgctaataga
acctccttagaaaatcatgaccaaatgtctgtgaactgcagaaggttgcccgccgagcca
cctggtaagctccaaattgaagtttcaacggatcttacagcaattaatggtctttcttac
aataaaaatcttgccaatggcagttatgatttagctaacagagacttttgccaaggaaat
cagctgaattactacaagcaggaaatacctgtacaaccaactacctcatatcccattcag
aatttatacagttatgagaaccagcccaagcccagcgatgaatgtactctgagtaataaa
taccttgatggaaacgctaacacatctacctcagatggaagtcccgtggtgtccgtgatg
cctggtacgacagatgctgttaaagcacccaaggacaggatggattctgagcagagccct
tcagctgggtactcctcaagaactcttggccccaatcctggactgattcttcaggctttg
actctgtcaaatgctagcgatgggtttaacctggagcggcttgaaatgcttggtgattcc
tttttaaagcatgctatcaccacatatctattttgcacttaccctgatgctcatgagggc
cgcctttcgtatatgagaagcaaaaaggtcagcaactgtaacctgtatcgccttggcaag
aagaagggactgccaagccgcatggtggtgtccatatttgatcctcctgtgaactggctt
cctcctggttatgtggtaaatcaagacagaagtagcacagataaacgggagaaggaggaa
atgacaaaagactgcttgctggctaatggtaaactgggcgaggactgtgaggaggaagaa
gacgaggaggatgaggaggacgaggaggatgaggaggaggaagacgaagaggaggaggac
ctgccgtggagagctcccaaggaagaggctgagtttgaagatgatttcctggagtacgat
caggaacacatccagtttatagacaacatgttaatggggtcaggagcctttgtaaagaaa
atttctctttctcctttttcaaccactgattctgcatatgaatggaaaatgcccaaaaag
tcctccttaggcaatatgccgttttcctcagatttcgaggactttgactacagctcttgg
gatgcgatgtgctatctggatcctagcaaagccgttgaggaggatgactttgtggtgggc
ttctggaatccgtcagaagaaaactgtggcgttgacacagggaagcagtctatttcttac
gacttgcacacagagcagtgcattgctgacaaaagcatagcggactgtgtggaggccctg
ctgggctgctatttgaccagctgtggcgagagggctgctcagcttttcctctgttcgctg
gggctgaaggtgctccccgtcattaaaaggaccggtggggaaaaggccctgtgtcctgct
caggggactctgagcagccaacaaaagggcctttcaggaggctgcactgatgcaactggt
ccgtgttcctctgctgggaaagatttggagtacggctgcttgaagatcccaccgaggtgt
atgtttgaccatccagatgcagagaaaactctgagtcacctgatctcggggtttgaaaat
tttgagaagaaaatcaactacagattcaagaataaggcttaccttctgcaggcttttaca
cacgcctcctaccactacaacactattactgattgttaccagcgcctagaattcctggga
gatgcgattttggactacctcataaccaagcacctttacgaagacccacggcagcactcc
ccaggggtcctcactgacctgcgctctgccctggtcaacaacaccatcttcgcatctctg
gctgtgaagtatgactaccataaatacttcaaagctgtttctcccgagctcttccatgtc
atcgatgactttgtgcagtttcagctcgagaagaacgagatgcaaggcatggattctgag
cttaggagatccgaggaggatgaagaaaaagaagaagatattgaagttccaaaggccatg
ggggatatttttgagtccctggctggtgccatttacatggacagtgggatgtccctggag
gtagtctggcaggtgtattatccaatgatgcggccactgatagaaaaattttctgcaaat
gtgccccgttctccagttcgagaattgcttgagatggaaccagaaaccgccaaatttagc
ccggcggagagaacttatgacgggaaggtcagagtcaccgtggaagtcgtaggaaagggg
aagtttaaaggtgtcggccgaagctacaggattgccaaatctgccgcagcaagaagagcc
ctccgcagcctcaaagccaaccaacctcaggttcccaacagctga
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integrated database retrieval system
