Nannospalax galili (Upper Galilee mountains blind mole rat): 103737832
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Entry
103737832 CDS
T03372
Symbol
Atrx
Name
(RefSeq) ATRX, chromatin remodeler
KO
K10779
transcriptional regulator ATRX
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
103737832 (Atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngi03000
]
103737832 (Atrx)
03036 Chromosome and associated proteins [BR:
ngi03036
]
103737832 (Atrx)
Transcription factors [BR:
ngi03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
103737832 (Atrx)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
103737832 (Atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
103737832
NCBI-ProteinID:
XP_008835889
LinkDB
All DBs
Position
Un
AA seq
2565 aa
AA seq
DB search
MTERGRGRTRQFSCLSLGPTKWRRRRRRFVSAAPAAVAALAAFELWGGPSTSTRGSGDSS
PLRPESGAGEHGTAPKGCQSRGGVLAKNMTAEPISESKLNTLVQKLHDFLAHSSEESEET
CSSPRLAVNQSTDKISGFGNNSDMMENSKEEGTSTSEKSKSLGSSRSKRKPSIVTKYVES
DDEKPLDENVNEETSNENSENDITMQSLPKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMK
TENLKKRGEDGLHGIVSCTACGQQVNHFQKDSIYRHPSLKVLICKNCFKYYMSDDISRDS
DGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPL
LDLVTACNSVFENLEQLLQQNKKKIKIDNEKSSKVCDHPPKFSPKKNSSSCNGEEKKLDD
SCSGSVTYTYSALIVPKEMIKKAKKLIETTSNMNSSYIKFLKQAADNSELNSASKLRQLK
VFKSVLADIKKVHLALEDDLNFEIRALDVVHKEKNTKEHKVTDAKSETRVRKGEKPYAME
KKEILKLDAKSSRKMLESEHIPAEERKANKNTSGEHRKSDRKEEPHYEPASTSEDLDMDI
VSVPSSVPEDIFENLETAMEVQSSADCRGDGNSGTEQELESSSLKLSTPAKDSRGSIKSK
TTAKVTKELYVKLTPVSLSNSPIKGADCQEIAQEKDGSKSSGLNPKSEKCGPAQENSDDE
HSLENDVPVLFEESDLRRSPRVKTTPLRRQTETNPGTSNSDEEGNETVKEKQKLSVPIRK
KDKRNSSDSTIGNPKPNKLPKSKQPGIVDQNSDSDEMLAVLKDVSQMSHSSSSDTDINET
LINHKIQTGKEDNGKRKRKSSTSGSDFDIKKGKSIKSSIISKKKRQNYSESSNYDSELER
EIKSMSKIGAARITKKRVLDKKDGDSSEDEKHSKKEVDNAGQECVKTAQERSTDDAEKQE
RENASSAEGSCEKDGKSVVESREMLSKRQQPSGSSDSAEKPSGREDSANSPEDKRVAKNK
EKNKHLKTKTCRKAQSGSSSIADKCSKREQSDESSEGEKKQSKKEMEEKEKRTTDLKDKP
IKTEPQDDSSSDGTEKLPEGEEIGHFPKGIKQSKNDTTDGEKKGKKLRNKISKKKEELSD
SIEKLPGKGDSCDSSEDKKNKNRTSGREKKKCSFPEKSSRKKPECSSSDTEKYSLKEDCC
DSSDKRPKRIELRERRNLNSKRNTKELPSGSSSSDPEESYEDKKKQKKQRTSAKKKAGNA
KEKRRNSLRASAKRKQRDITSSSSDIGDDDQNSAGEGSSDEQKIKPVTEDSVPPSHTGFC
QSSGDEALSKSVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEGEKKR
TGKQNEETPGDEESKNQVNSESDSDSEESKKPRYRHRLLRYKLTVSDGESGEEKKTKPKE
HKEAKSRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQK
KKRRRIKVQEDSSSENKSHSEEERKEEEEEEEEEEEDENDDSKSPGKGRKKIRKILKDDK
LRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPTKCPITTKLVLDEDEETKEP
LVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFL
HTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLNDDEKLEVSELATVKRPQERSYM
LQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEA
SAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQ
CADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTAIQCKLYQ
YYLDHLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMD
EFIASDSDETSMSLSSDEYAKKKKTKGKRGKKDSSSSGSGSDNDVEVIKVWNSRSRGGGE
GNVDETGNNPSVSLKLEESKTASTSNPSSPAPDWYKDFVTDADAEVLEHSGKMVLLFEIL
RMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEEKDKPLIYKGEGKWLRNIDYYRLD
GSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQS
IFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTEL
YTFEPDLLDDPNSEKKKKRDTPMLPKDTILAELLQIHKEHIVGYHEHDSLLDHKEEEELT
EEERKAAWAEYEAEKKGLTMRFNIPTGTNLPPVTFNSQTPYIPFNLGALSAMSNQQLEDL
INQGREKVVEATNSVTAVRIQPLEDIISAVWKENMNLSEAQVQALALSRQASQELDVKRR
EAIYSDVLTKQQMLINCVQRILMNRRLQQQYNQQQQQQLTYQQATLGHLMMPKPPNLIMT
PSNYQQIDMRGMYQSVAGGMQPPPLQRAPPPMRSKNPGPSQGKSM
NT seq
7698 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaagaggaagagggaggacgcgccaattctcctgcctgagcctcggcccaaca
aaatggcggcggcggcggcgtcgctttgtttccgcggctcctgcggcggtggctgcgcta
gcggcctttgagctgtggggaggacccagcaccagcacccgtggctccggagattccagt
ccacttcgaccggagtcgggcgccggggaacacggaacggcacccaagggttgccaaagc
cgaggaggcgtcctagcaaaaaacatgaccgctgagcccattagtgaaagcaagttgaat
acattggtgcagaagcttcatgatttcctggcacattcatcagaagaatctgaggaaacg
tgttcttctccacgacttgcagtgaaccaaagcacagataaaattagtggttttggaaat
aactccgatatgatggaaaatagtaaggaagagggaactagcacctcagaaaaatccaaa
tctttaggatcttcccgatcaaagaggaaaccttcaattgtgacaaaatatgtagaatct
gatgatgaaaaacctttggatgagaatgtaaatgaagaaacttctaatgaaaattcagaa
aatgatattactatgcaaagcttgccaaaaggtacagtgattgtacaaccagagccagtg
ctgaatgaagacaaagatgattttaaagggcctgaatttagaagcagaagtaaaatgaaa
actgaaaatctcaaaaaacgcggagaagatgggcttcatgggattgtgagctgcaccgct
tgtggacaacaggtcaatcattttcaaaaagattccatttatagacacccttcactgaaa
gtccttatttgtaagaattgctttaagtattacatgagtgacgacattagccgtgactca
gatggaatggatgaacagtgtagatggtgtgcagaaggtgggaatttgatttgttgcgac
ttctgccataatgccttctgtaagaaatgcatcctgcgcaaccttggtagaaaggagtta
tctacaataatggatgaaaacaatcaatggtattgctacatttgtcacccagagcctcta
ttggacttggtcactgcatgtaacagcgtatttgagaatttagaacagttgctgcaacaa
aataaaaagaagataaaaattgacaatgaaaagagtagtaaagtttgtgaccatccaccc
aaattttctccgaagaagaatagttccagttgtaatggagaagaaaagaaattagatgac
tcgtgttctggctctgttacctatacttactcagcactaattgtgcccaaagagatgatt
aagaaggccaaaaaactgattgagactacatccaacatgaactctagttatattaagttt
ctgaagcaggcagcagataattcagaattgaattctgcctcaaaattacgtcaacttaag
gtttttaaatctgtgttggctgatattaagaaggttcatcttgcattagaagatgatttg
aattttgagattcgagctttggatgttgtacacaaagagaaaaataccaaagagcataaa
gtcacagatgctaagtctgaaacaagagtccgcaaaggggaaaaaccttatgccatggaa
aagaaagaaattttaaagttagatgctaaatcatcaagaaaaatgttagagagtgagcac
atcccagcagaggagcgcaaagcaaataaaaatactagtggtgaacataggaaatctgat
aggaaagaagaacctcactatgaacctgcgagcacgtctgaagacttagacatggatatt
gtctctgttccttcctcagttccggaagatatttttgagaatcttgagactgctatggaa
gttcagagttcagctgattgtcgaggagatggcaacagtgggactgagcaagaattggag
agctcatctctaaaattaagtactcctgccaaagacagtagaggaagtattaagtcaaaa
accacagcaaaagtcacaaaagaactctacgttaaactcacccctgtttccctttctaat
tccccaattaaaggtgctgactgtcaggaaattgcacaggagaaagatggctctaaaagt
tctggtctgaaccccaagtcagagaaatgtggacctgcgcaggaaaatagtgatgatgag
cattcgcttgaaaatgatgttccagtactttttgaagaatcggatcttcgaagatccccc
cgtgtcaaaactacacccttgaggcgacagacagaaactaaccctggaacatcgaattca
gatgaagaaggtaatgaaaccgttaaagagaagcaaaaactgtcagtgcctataagaaaa
aaggataagcgaaattcttctgacagtactattggtaatcctaaacctaataaattgcct
aaatctaagcaaccagggattgtggatcaaaattcagattctgatgaaatgctagcagtc
ctcaaagatgtaagccagatgagtcacagttcttcttcagatactgacattaatgaaaca
cttataaatcataagattcaaacagggaaagaagataatggaaaaaggaaaaggaaaagt
tctacttctggctcagattttgacattaagaaaggaaaatcaattaaaagctctataatc
tctaaaaagaaacgccaaaactactcagagtcttctaattatgactcagagttagaaaga
gagataaaaagcatgagcaaaattggggctgccagaataaccaaaaaaagggttttagat
aaaaaagatggtgactcttctgaagatgaaaagcatagcaaaaaggaagtggataatgca
gggcaggaatgtgtgaagactgcacaagagagatcaactgatgatgctgaaaagcaagag
agagagaatgcctcttcagcggaaggttcatgtgagaaagatggtaagagtgtggtggaa
tcgagagagatgctgtctaagaggcagcaaccgagtggttcctctgacagtgcagaaaag
ccgtcagggagagaggacagtgcaaattctcctgaagacaaaagagttgctaagaacaaa
gagaagaataagcacctgaaaactaaaacctgtagaaaagcacaaagtggctcatccagt
attgctgataaatgttcaaagagagagcagagtgatgaatcctctgaaggcgagaagaag
cagagcaagaaggaaatggaagaaaaagaaaagagaactacagacttgaaggacaaacca
attaagacagagccccaggatgattcttcatctgatggtactgagaaattacctgaggga
gaagagattggccattttcctaaaggcataaaacaaagtaaaaatgacacaacagatggg
gaaaagaaaggcaaaaaactaagaaataaaatatccaaaaagaaggaagaattatctgat
agtattgagaaattgccaggaaaaggagatagttgtgactcttcagaagataaaaagaac
aagaacagaacttctggtagagagaagaaaaaatgcagctttcctgaaaagagttcaagg
aagaaaccagagtgttcgtcatctgatactgagaaatattccttgaaagaagactgttgt
gactcttctgataagagaccaaaaagaattgaattgagagaaagaagaaatttaaattca
aagagaaataccaaggaattaccaagtggttcatcatcatctgatcctgaggaaagttat
gaagataagaaaaagcagaagaaacaaagaacttcagctaaaaagaaggcaggcaatgcc
aaggagaaaagaagaaattccttgagagcaagtgctaagaggaagcaaagagacattact
tcttcgtcttctgatataggagatgatgaccagaattctgcaggtgaggggagcagtgat
gaacagaaaataaagcctgtgactgaggactcagtgccgccttcacacactggattttgt
caatcttcaggagatgaagccttatctaaatcagtgcctgtcacagtggatgatgatgac
gacgacaatgatcctgagaatagaattgccaagaagatgcttttggaagaaattaaagcc
aatctttcctctgatgaggatggatcttcagatgatgaaccagaaggagagaaaaaaaga
actggaaaacaaaatgaagaaaccccaggagatgaggaatccaaaaatcaagtcaattct
gaatcagattcagattctgaagaatctaagaagccaagatacagacataggcttttgagg
tacaaactgactgtgagcgatggagaatctggagaagaaaaaaagacaaagcccaaggaa
cataaagaagccaaaagcagaaatagaagaaaggtgagcagtgaagattcagaagattct
gattttcaggagtcaggagttagtgaagaagtcagtgaatctgaggatgagcagcgacca
agaacaaggtctgcaaagaaagcagaattggaagaaaatcagcggagttacaaacagaaa
aagaaaagacgacgcataaaggttcaagaagattcatctagtgaaaataagagccattct
gaagaagaacgaaaagaagaagaggaagaggaggaagaggaggaggaagatgaaaatgat
gattctaagtcacctggaaaaggcagaaagaaaattcggaagattcttaaagatgataaa
ctaagaacagaaacacagaatgcccttaaagaagaggaagagaggcgaaaacgtattgca
gagagggagcgtgagagagagaaattaagagaggtaatagaaattgaagatgcttcgcct
accaagtgtccaataacaacaaaattggttttagatgaagatgaagaaaccaaagaacct
ttagttcaggttcacagaaacatggttataaaattgaaaccacatcaagtagacggtgtt
cagtttatgtgggattgctgctgtgagtccgtgaaaaaaacaaagaaatctccaggttca
ggatgtattcttgcccactgcatgggccttggtaagactttgcaggtggtaagttttctt
cacacagttcttttgtgtgacaaattggatttcagcacagcgttagtagtttgtccgctt
aatactgctttgaattggatgaatgaatttgagaagtggcaagagggattaaacgatgat
gaaaagcttgaggtctctgaattagcaactgtgaaacgtcctcaggagagaagctacatg
ctacagaggtggcaagaagatggtggagttatgatcatagggtatgagatgtacagaaat
cttgctcaaggaaggaatgtgaagagtcggaaacttaaagaaatatttaacaaagcttta
gtcgatccaggccctgattttgttgtttgtgatgaaggccatattctaaaaaatgaagca
tctgctgtttcaaaagccatgaactctattagatcaaggaggaggattattttaacagga
acaccacttcaaaataacctaattgagtatcattgtatggttaactttatcaaggaaaat
ttacttggatccatcaaggagttcaggaatagatttatcaatccaatccaaaatggtcag
tgtgcagattctaccatggtagacgtgagagtgatgaaaaaacgtgctcatattctctat
gagatgttagctggatgtgttcagaggaaagattatacagcattaacaaagtttttgcct
ccaaaacatgaatatgtgttagctgtgagaatgactgctatccaatgcaagctctatcag
tactacttagatcacttaacaggtgtaggtaatagcagtgaaggtggaagaggaaaggca
ggtgcgaagctcttccaagatttccagatgttaagtagaatctggactcatccttggtgt
ttgcagctggactacattagcaaagaaaataagggttattttgatgaagatagtatggat
gaatttatagcttcagattccgatgaaacttctatgagcttaagctcagatgagtatgca
aaaaagaagaaaacaaaggggaaaagggggaaaaaggatagtagctcaagtggaagtggc
agtgacaatgatgttgaagtcatcaaagtctggaactcaagatctagaggaggtggtgaa
ggaaatgtggatgaaacaggaaacaacccttcagtttctttgaagctggaagagagtaaa
actgcttccacctctaacccaagtagcccagctccagactggtacaaagattttgttacg
gatgccgatgctgaggttttagagcattctggaaaaatggtacttctttttgaaattctt
cgaatggcagaagaaattggggataaagttcttgtttttagccaatctctcatatctttg
gacttgattgaagattttcttgaattggctagtagggagaaaacagaagaaaaggataaa
cctctcatttataaaggtgaagggaagtggctccgaaatattgactattaccgcttagat
ggttctactactgcacagtcgaggaagaaatgggctgaagaatttaatgatgaaactaat
gtgagagggcgattgtttatcatttccaccaaagcaggatctcttgggattaatctggta
gctgctaatcgagtgattatatttgatgcttcttggaatccatcttatgacatccagagc
atattcagagtttatcgctttggacaaactaagcctgtttatgtatataggttcttagct
cagggaaccatggaagataagatttatgatcgtcaggtaactaagcagtcactgtctttt
cgagttgttgatcaacagcaagttgagcgtcattttaccatgaatgagcttactgagctt
tatacctttgagccagacttgttagatgaccctaattcagaaaagaagaagaaaagggat
acccctatgttgccgaaggataccatacttgcggaacttcttcaaatacataaagaacac
attgttggatatcatgaacacgattctcttttggaccacaaagaagaagaggagttgact
gaagaagaaagaaaagcagcttgggctgaatatgaagcagaaaagaagggactgaccatg
cgtttcaacataccaactgggaccaatttaccccctgtcactttcaactctcagactcct
tatattcctttcaatttgggagccctgtcagcaatgagtaatcaacagctggaggacctt
attaatcaaggaagagagaaagttgtggaagcaacgaacagtgtgacagcagtgcggatt
cagcctctggaagatatcatttcagctgtatggaaagaaaacatgaatctctcagaagcc
caagtccaagcactagcattaagtaggcaagccagccaggagcttgatgttaaacgaaga
gaagcaatctacagtgatgtgttgacaaaacaacagatgttaatcaactgtgttcagcga
atacttatgaacagaaggctccagcagcagtacaatcagcagcaacaacaacaactgact
tatcagcaagcaacactgggtcacctcatgatgccaaagcctccaaatttaatcatgact
ccttctaactaccagcagattgatatgagaggaatgtatcagtcagtggctggtggtatg
cagccaccacccttacagcgtgcaccacccccaatgagaagcaaaaatccaggaccttcc
caagggaaatcaatgtga
DBGET
integrated database retrieval system
