Nannospalax galili (Upper Galilee mountains blind mole rat): 103738003
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Entry
103738003 CDS
T03372
Symbol
Pcdh18
Name
(RefSeq) protocadherin 18
KO
K16499
protocadherin delta 2
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngi04515
]
103738003 (Pcdh18)
Cell adhesion molecules [BR:
ngi04515
]
Cadherins
Protocadherins
103738003 (Pcdh18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
BBS1
TMEM154
PAH
Syndecan
Cadherin_C_2
PepSY
MPS-4
DUF3418
Motif
Other DBs
NCBI-GeneID:
103738003
NCBI-ProteinID:
XP_008836044
LinkDB
All DBs
Position
Un
AA seq
1135 aa
AA seq
DB search
MHPMNTKMHFSFAFALLMAFYTHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLPN
PSAVRFRAMQRGNSPLLVVNENTGEISIGSTIDREQLCQKNLNCSIEFDVITLPTEHLQL
FHIEVEVLDINDNSPQFSRALIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAND
FFNIEVRTRSDGTKYAELIVVKELDRELKSSYELQLTASDLGVPQRSGSSILKISISDSN
DNSPAFEQQAYTIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKID
SERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIVIKVVDVNDNKPEININLMS
PGKEEISYVFEGDPIDTFVAFVRVQDKDSGLNGEIICKLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYSLTVIAEDKGTPSLSSVKHFTVQINDINDNPPRFQRSRYEFVISENNSP
GAYITTVTAADPDLGENGQVTYTILESFILGNSITTYVTIDPSNGAIYALRIFDHEEVSQ
ITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVVGPTLHNNTAEISIPKGAESGFHV
TRVRAIDRDSGVNAELSCFIVAGNEENIFIMDPRSCDIHTNVSMESVPSNEWELSVIIQD
KGNPQLHTKILLKCMILDYVESVTSTAMTSISQASLDVSMIIIISLGAICAVLLVIMVLF
ATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSPS
SSPTLERGQMGSRQSQNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLHQ
GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG
FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ
QHPHQSLEDDSQPAESGEKKKSFSTFGKDSPSDEDSGDSSTSSLLSEMSSVFQRLLPASL
DTYSECSEVDRSNSLERRKGPVQAKTGGYPQGVAAWAASTHFQNPTSNSGTPLGTHSSVQ
PTSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgcacccaatgaatactaaaatgcactttagctttgcgtttgcactcctgatggcgttt
tacacccacgatgtactgggtaaaaatttgaaatacagaatttatgaggagcagagggtt
gggtcggtaattgcaagactatcagaggatgtggccgatgttttattgaagctacctaac
ccttctgccgttcgttttcgagccatgcagagaggaaattctcctctcctggtggtgaat
gagaataccggggaaatcagcatagggtctacaatcgaccgcgagcaactgtgccagaaa
aacttgaactgctccatagagtttgatgtgatcactctacccaccgagcatctgcagctg
ttccatattgaagtggaagtgctggatattaacgacaactctccccagttctcaagagcc
ctcattcccattgagatatcggagagcgcggctgttggtactcggatccccctggacagt
gcatttgatccagatgttggggaaaattccctccatacctactctctctcggccaatgat
tttttcaatatcgaggtgagaaccaggtcagatgggaccaagtatgcagaactcatagtg
gtgaaagagttggatagggagctgaaatccagctacgagcttcagctcaccgcttccgac
ctgggagtgccccagaggtctggctcctccattctgaaaataagcatttcggattccaat
gacaacagccccgcgtttgagcagcaagcttacacaatacaactcttagaaaactctcca
gtcggcactttgctcctggatctaaatgccacggatccagatgagggcgctaatgggaaa
attgtatattccttcagcagtcatgtgtctcccaaaattatagagacttttaaaatcgat
tcagaaagaggacacttgactcttttcaaacaagtggattatgaaatcaccaaatcctac
gagattgatgttcaagctcaagatttgggtccaaattcgattcccgcccattgcaaaatt
gtaattaaggttgtggatgtcaatgacaataaacctgagattaacataaacctcatgtcc
cctggaaaagaagaaatatcttatgtttttgaaggagatcccattgacacctttgttgct
tttgtcagggttcaagacaaggattctgggctgaatggggaaataatttgtaagcttcat
ggacatggacattttaaacttcagaagacatatgaaaacaattacttaatcttgaccaat
gcaactctggatagagaaaagaggtctgaatatagtttgactgtaattgccgaggacaag
gggacacccagcctctcttcagtaaaacattttactgttcaaatcaatgatataaatgac
aatccacctcgcttccagaggagccgatatgaatttgtcatctcagagaataactcccca
ggggcatatatcaccactgttactgccgcagatccagatcttggtgaaaatgggcaggtg
acatataccattttggagagttttatactgggaaattccataaccacctatgtaaccatt
gacccatccaatggtgccatctatgccctcaggatctttgatcatgaagaagtaagtcag
atcacttttgtggttgaagcaagagatggaggaagtccaaaacaactagtaagcaatacc
acagttgtgcttaccatcattgatgagaatgacaatgtccctgtggttgtagggcctaca
ctgcataataatactgcagaaatctccatccccaagggagctgaaagtggctttcatgtc
acaagagtaagagcaattgacagagactctggtgtcaatgctgaactcagctgcttcata
gtagctgggaatgaggagaacatcttcatcatggatccacgatcatgtgacatccacact
aatgtgagcatggagtctgttccttccaatgaatgggagctctcagttatcatccaagac
aaaggcaatcctcaactgcataccaaaatccttctgaagtgtatgattttggactatgta
gaatctgtgacaagtacagcaatgacatccatcagccaggcatccttggatgtgtccatg
attatcattatttccttgggagcgatttgtgcagtgttattggttattatggtgctcttt
gcaacaaggtgtaaccgagaaaagaaagacacccgatcctacaactgcagggtcgcagag
tcaacttaccagcatcaccccaaaaggccatccaggcagatccacaaaggagatatcaca
ttggtgcctaccatcaatggcactctgcccatcagatctcatcacagatcctctccatct
tcatctccaaccttagaaagggggcaaatgggcagccgccagagtcagaacagtcaccag
tcactcaacagtttggtcacaatctcatcaaaccacgtgccggagaatttctcattagaa
ctcacccatgccacacccgctgttgagcaggtctcccagcttctctccatgctccatcag
gggcaataccagccaaggccaagttttcgagggaacaaatattccagaagctacagatat
gcccttcaagacatggataaatttagcttgaaagacagtggccgtggggacagtgaagca
ggagatagtgattatgatttgggacgagattctccaatagatcggctgctgggggaagga
ttcagtgacctgtttctcacggatggaagaattccagcagctatgaggctatgcacggag
gagtgcagggtcctgggccactctgaccagtgctggatgcccccgctcccctcgccatcc
tctgactacaggagcaacatgtttattcctggggaagaattcccagctcaacctcagcaa
cagcacccacatcagagccttgaggatgacagccagcctgcagaatcaggggagaagaag
aagagcttttccacctttgggaaggactccccgagtgatgaggactctggggactccagc
acatcgtctctgctttcggaaatgagcagtgtgttccagcgcctgctccctgcttccctg
gatacctattctgagtgtagcgaggtggaccggtctaactctctggaacgtcggaagggc
ccagtgcaggccaaaactgggggctacccacaaggggtggcggcctgggcagccagcact
cattttcagaatcccaccagcaactctgggacacctctgggaactcactccagcgtgcag
cctacttccaaatggctgccagctatggaggagattcctgaaaactatgaggaagatgat
tttgacaatgtgctcaaccaccttaacgatgggaaacatgaactcatggacgccagtgag
ttggtggctgagattaacaaactgctgcaagatgtccgtcagagctag
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integrated database retrieval system
