Nannospalax galili (Upper Galilee mountains blind mole rat): 103738407
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Entry
103738407 CDS
T03372
Symbol
Utp18
Name
(RefSeq) UTP18, small subunit processome component
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103738407 (Utp18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngi03009
]
103738407 (Utp18)
Ribosome biogenesis [BR:
ngi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
103738407 (Utp18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Cytochrom_D1
Beta-prop_SPT8
Beta-prop_EML
EIF3I
Beta-prop_TEP1_C
Beta-prop_Vps41
Pox_D5
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
PQQ_3
Motif
Other DBs
NCBI-GeneID:
103738407
NCBI-ProteinID:
XP_008836631
LinkDB
All DBs
Position
Un
AA seq
572 aa
AA seq
DB search
MRSRAPRERLRFFSDPTMPPERRSRTKPDRRAGAGPERKPAKRTDRGAEAGSGRTLRKAA
RSSPRTPPAQPSAAASAVSAAAEESWLRRRNRLALEDDKPAAERCLEELVFGDVEDDEDA
LLRRLRGARGQLCGSSDDVEVENETKDNFPQQKKPVWVDEEDEDEEMVDMMNNRFRKDMM
RNTSESKLSKDKLQKRLKEEFQHAMGGVPGWAEPRNKRKTSSEDESEEDEDGLLQRTGNF
ISTSTSLPRGILKMKNCQPANAERPTSARISSVQFHPGAQVVMVAGLDNAISLFQVDGKT
NPKIQSIYLDRFPIFKACFSANGEEVLATSMHSKVLYVYEMLAGKLIPVHQVRGLKEKIV
KRFEVSPNGSFLLITGIAGFSHLLSMKTKELIGSMKINGRVAASTFSSDSKKIYVSSGDG
EVYIWDVNSRKCINRFVDEGSLCGLSIATSRNGQYVACGSNSGVVNIYNQDSCLQETNPK
PIKAIMNLVTGATYLTFNPTTEILAIASRKMKEAVRLVHLPSCTVFSNFPVIKKSSISRV
QTMDFSPRGGYFALGNEKGKALMYRLHHYSDF
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtagagctccacgtgaacgtctgcgtttcttctcagaccccacgatgccgccg
gaacgcaggagccgaacgaaaccagacaggagagccggagcggggccggagcggaagccc
gcgaagaggacggatcgaggagccgaggccgggagcggcaggacgctccgaaaggctgcc
cgttcatccccacggacaccgccggcccagccgagcgccgcagccagcgcggtcagcgcc
gcggcggaggagagctggctccggcggcggaaccgcctggcgctggaggacgacaaaccg
gccgccgagcgctgcctggaagagctggtgttcggcgacgtcgaggacgacgaggacgcg
ctgctgcggcggctgcgaggcgcgcggggtcaactctgtggaagctcagatgatgtggaa
gtggagaatgaaaccaaggacaatttccctcagcagaagaagccagtttgggtggatgaa
gaagatgaagatgaggaaatggttgacatgatgaacaatcgatttcgaaaagatatgatg
agaaataccagtgaaagtaaactttcaaaagataagcttcaaaagagacttaaagaggaa
ttccagcatgccatgggaggagtacctggatgggcagagcctaggaataagcggaaaaca
tcttcagaggatgaaagtgaagaggatgaagatggtttgttgcaaaggactgggaatttc
atatccacatccacttctcttccaagaggaattttgaagatgaagaactgccagcctgcc
aatgctgaacggcccacctctgctcggatttcgtcagtgcagttccatcctggtgcacag
gtggtgatggtcgctgggctagataatgccatctcattgtttcaggttgatggcaaaaca
aatcctaaaatccagagcatctatttggacaggtttccaatctttaaggcttgttttagt
gctaatggagaagaggttttagccacaagtatgcacagcaaggttctttatgtttatgag
atgctagctggaaagttaattcctgtacatcaagtgagaggtttgaaagagaaaatagtg
aagcgctttgaagtctcaccaaatggttccttcttgcttataactggcattgctggattt
tctcatttgctttcgatgaagaccaaagaactgattggtagcatgaaaattaatggaaga
gttgcggcatccacattctcttcagatagtaagaagatctatgtttcttcaggggatgga
gaagtttacatttgggatgtgaattctaggaaatgcattaacagatttgttgatgaaggc
agtttatgtggattaagcattgctacatcaaggaacggacagtatgtggcttgtggttct
aatagtggagtagtaaacatatacaatcaagattcgtgtctccaagaaaccaacccaaag
cccataaaagctataatgaacctggttactggtgctacttatttgactttcaatcccact
acagaaatcttggcaatagcatcaagaaaaatgaaagaagccgtcagattggttcacctt
ccttcctgtacagtgttttctaactttccagtcattaagaagagttctatttctcgtgtt
caaaccatggatttttctcccagaggaggctactttgccttggggaatgagaaaggcaag
gccctgatgtataggttgcaccattactcagacttctaa
DBGET
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