Nannospalax galili (Upper Galilee mountains blind mole rat): 103739377
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Entry
103739377 CDS
T03372
Symbol
Dcp1b
Name
(RefSeq) decapping mRNA 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103739377 (Dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103739377 (Dcp1b)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103739377 (Dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
103739377 (Dcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
103739377
NCBI-ProteinID:
XP_008837978
LinkDB
All DBs
Position
Un
AA seq
579 aa
AA seq
DB search
MAAAVAGGLPGKGHDISLAALRRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLF
VYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEEC
QRIAELMKHLTEYEQLKACHGAGAGPSPVTLSSGDGREVDILQMLTKAKDEYTKCKTCSE
PKQMTSSAIYDNPNLIKPIPVKPSDNQQQRRPLPRKTLDPEPQHLSLTALFGKKDQVPCQ
ETVTPPRILYQQQQEKLSVHQGVKCSLSHEEPRKLSPPVEKQLCPAIQKLMVRSAKLHPE
QQPCERGSPNPTVLPGPIQPGSLWNIRTSNSSQSACRTQKLLEQLQSASRTAQKYNPSAA
APVSPAVPSSSLILSAATQVAPVQSVAQSQLVYVNGHLPPPTLGHQTLRKEQCTLPRQAL
PLPGSQESSPTVLPAQELLRKLQAVQQEQQLQAAPRPALAAKFPVSAQGSGTEKPLEAWV
SKPASKEKQAPLLQPTCAPLRETDSRLMALGDQKLPAASPSCLLPLQNWESSTMASRPLT
RLQLQEALLNLIQNDDNFLSIIYETYLFSVTQAAMRKTT
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcggtggcaggtggcctgcctgggaaggggcacgacatcagcctggcagcc
ctgcggcgccacgacccctacatcaaccgcatcgtggacgtggccagccaggtggctctg
tacaccttcggccatcgggccaacgagtgggagaagactgatgtggaaggaaccttgttt
gtttacacaaggtctgcttctccaaagcatggattcaccattatgaataggctcagcatg
gaaaacagaacagaacctattactaaagacctggacttccagctccaggaccctttcctt
ctctacagaaatgccagattgtccatttatgggatttggttttatgataaggaagaatgc
caaagaattgcagaacttatgaaacacctaactgagtatgaacagttgaaagcttgtcat
ggagcaggagcaggaccttccccagtgaccctcagttcaggagacggccgagaagtagat
atcttacagatgctcaccaaggccaaagatgagtacacgaagtgtaaaacctgttctgag
cccaaacagatgaccagttctgccatctatgacaatcccaatcttatcaaaccaatcccc
gtgaaacccagtgacaaccagcagcagcgacgacctctgcccagaaagaccttagaccct
gagccccaacacttatctttgacagctctatttggaaagaaagaccaagttccctgtcaa
gagacggtgacgccccctcggattctctaccagcagcagcaagagaagctttcagttcat
cagggggttaaatgctccttgtcccatgaagaacccagaaagctctcaccccctgtagag
aagcaactctgcccagccatccagaaactcatggtcaggagcgcaaagctgcaccccgaa
cagcagccctgtgaaagaggcagtcctaatcctacagttcttcccggacccatccagccg
ggttccctctggaacattagaacttcgaactcttcacaaagtgcatgcagaacccagaag
ctgttagagcagctccagagcgcctccaggacagcacagaagtacaaccccagtgcagca
gcacctgtcagccctgctgtccccagcagcagcctcatcctctctgctgccactcaagtg
gccccagtccaaagtgtggcccagtcccagctggtctatgtcaatggccaccttccacct
cctacactaggacatcagactctcaggaaggagcagtgcacactacccagacaggccctg
cccctgcctggcagccaggagagcagccccacggtgctccctgctcaggagctactgaga
aagctccaggcagtgcagcaggaacagcagttgcaagcggccccccggccagccttggca
gccaagttccctgtgtcagcccagggctcagggacagagaagcccttggaggcctgggtc
agcaagccagccagcaaggagaagcaggctcctcttctgcagcctacctgtgccccgctg
agggaaactgacagtaggctcatggccctgggagaccagaaactgcctgctgcttccccc
agctgcctcctgcctttgcagaactgggagtcctccactatggccagcaggcccctcacc
aggctgcagctccaggaggcactgctgaacctcattcagaatgacgacaatttcttaagc
ataatctacgaaacatatctcttcagtgtgacacaagcagccatgagaaaaaccacataa
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