Nannospalax galili (Upper Galilee mountains blind mole rat): 103739470
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Entry
103739470 CDS
T03372
Symbol
Acin1
Name
(RefSeq) apoptotic chromatin condensation inducer 1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03013
Nucleocytoplasmic transport
ngi03015
mRNA surveillance pathway
ngi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103739470 (Acin1)
09122 Translation
03013 Nucleocytoplasmic transport
103739470 (Acin1)
03015 mRNA surveillance pathway
103739470 (Acin1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103739470 (Acin1)
03041 Spliceosome [BR:
ngi03041
]
103739470 (Acin1)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103739470 (Acin1)
Spliceosome [BR:
ngi03041
]
Complex C
Other components
EJC/TREX
103739470 (Acin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
103739470
NCBI-ProteinID:
XP_008838112
LinkDB
All DBs
Position
Un
AA seq
1292 aa
AA seq
DB search
MPEAVGTDPSTSRKMAELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKG
ALMLENLQKHSTPHAAFQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEE
ASAESEDEMIHPEGVASLLPPDFQSSLERPELELSRHSPRKSTSFSEEKGESDDEKPRKG
ERRSSRVRQAKASKLSEGSQAAEEEEDQETPSRNLRIRGDRNLKTEEEEEEEEEDDEEED
DVDEGQKSREAPVLKQFEDEEGEEVPRAKPEEVLDERPQTVRPQEQEGLEKGGRVTRSQE
ESRRSHLAKQQQETEIVSFLQEENEIKSSQGLEEKSQSPSPPQLTEDLEKASTVLQPGQT
VSEVETPPPLLTKEASSPPPHIQRQDEEEVEPVEGPAPPVLIQLSPPNADAETRELLVSQ
HSIQLVKGLSPLSSPTDTKAESSTGRVSEESVLPLVQKKMLTEDSTQKGPETESETSAHP
LPLKIEELAPTKGITEEPMKHQSLEQKEGQRASHMLFPSRRLKRSANSSSSRSSSSSSSR
SRSRSPDSSASQCHSSPRSKQRDVSQARVHANPHDRPKTGSRSTSESRSRSRSRSRSASS
SSRKSLSPGVSRDSNTSYAETKDPSSTQEVAVPPVAQLQVLEPKAGTSTSSSSLPVRHLS
QPEPTEKHVLLRLQPEQESPKKCEAEEAEPPAATQPQTSETSTSQLPESEKIHHIVEEEE
VTMDTSENRPENEVPEPPVPVADQVSNDDRPEGSTEDEEKKENAMPKSFKRKISVVSATK
GVQAGNSDTEGGQPGRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVDLH
ADDSRISEDETERNGDDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEPPAL
PQVSVEVALPPPVEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKIS
NIVHISNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHG
VKWPQSNPKFLCADYAERDELDYHRGLLVDRPSETKTEEQGVPRPLHPPPPPPVQPPSHP
RAEQREQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKS
KEKKSEKKEKAQEEPPAKLLDDLFRKTKAAPCIYWLPLTDIQIVQKEAERAERAKEREKR
RKEQEEEEQKEREKEAERERNRQLEREKRREHSRERDRDRERERDRERDRGDRDRERERD
RDRGRERDRRDTKRHSRSRSRSTPVRDRGGRR
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcggagctggaggag
gtgactctggacgggaagcctcttcaggctctgcgagtgaccgacctgaaggccgcacta
gagcagcgaggcctagccaagagcgggcagaagagtgccctggtcaagcggcttaaaggg
gctctaatgctagaaaatttgcagaaacactcaacaccccatgctgcattccagccaaat
tcacagattggggaggaaatgagccagaacagtttcataaagcagtatctggaaaagcag
caggagctacttaggcagcgtctagaacgtgaagctcgagaggcagcagaacttgaagaa
gcctcagctgagtcggaggacgagatgatccatccagagggagtggcttccctgctgcct
cctgactttcagagcagcctggagagaccagagctggagctcagcagacattcgcctaga
aagagtacctctttttctgaagagaaaggtgaatctgatgatgagaaaccaaggaaagga
gaaagacgatcatcccgggtcagacaggcaaaagcatccaaactctctgagggcagccag
gctgctgaggaagaagaagatcaagaaacgccatctagaaatctgagaatcagaggagat
cgaaatttaaaaacagaggaggaagaggaggaggaggaagaggatgatgaagaggaggac
gatgtagatgagggacagaaatctagagaggcaccagtcctgaaacagtttgaggatgaa
gagggggaagaggtccccagagcaaaaccagaagaggtactggatgagagaccccaaacc
gtaagaccccaggaacaggaaggattagagaaaggagggcgagtcacaagatcccaggaa
gaatctagaagaagtcatctggccaaacagcagcaagagacagagatagtttctttcctt
caggaagaaaacgaaataaaatcctcacagggcttagaggaaaagtcacagtccccttcc
ccacctcagctgactgaagatttggagaaggcctctactgtgctacagccagggcaaaca
gtcagtgaggtggaaactcccccacccttacttaccaaggaagcatcatctccaccacct
catatacaacgccaggatgaggaagaagtcgagcctgtggaaggccctgcgccgcctgtc
ctcattcagttatctcctcctaatgcagatgctgaaaccagggagctcttagtgtctcag
catagtatccagttggtgaaaggcctgtcccctttgtcaagtcctacagacaccaaagca
gaatcttcaacagggagagtgtcagaggagagtgtcctgcctctggttcagaaaaaaatg
ctgactgaagactctacccagaagggccctgaaactgagtcagaaacatctgctcaccca
ctccctctaaaaatagaggaattagcacccaccaaagggatcactgaggaacctatgaag
catcagtctttggaacagaaagaaggccaaagggcttctcatatgcttttcccaagccgc
agattgaagcggtcagcaaactcatcctctagccggtcctcatcctcctctagttctaga
tcccgatctcgctctcctgacagttcagcctcccagtgtcactcatctccaagatccaag
cagagagatgtatcccaagcacgagttcatgccaaccctcatgatagacccaagacgggc
tccaggtcaacatcagagtccaggtctcgttcccgatcccgttcccgttcggcatcaagc
agcagcaggaaatctttgagtcctggagtctccagggatagcaacaccagctatgctgaa
accaaagatccctcttctactcaggaggttgcagttccaccggtggcacagctgcaggtc
cttgaaccaaaggcagggacctctacctcctcatcctctctccccgtgaggcatctgagc
cagcctgagccaaccgaaaagcatgtgctcctgaggttacagccagagcaggagagccca
aagaagtgtgaagctgaagaggcagagcccccagctgccacacagccacaaacctcagaa
acatcgacctctcagctaccagaatcagaaaagattcatcacattgttgaggaggaggaa
gtgaccatggacacaagtgaaaacagacctgaaaatgaggttccagagcctccggtacct
gttgcagaccaagtcagcaatgatgaccgcccagagggcagtactgaagatgaggagaag
aaagagaacgcgatgcccaaatcattcaagaggaaaatctccgttgtctcagctaccaag
ggggtacaagctggaaacagtgacacagaggggggccagcctggtcgaaagcgacgttgg
ggagccagcacagccaccacccagaagaagccttccatcagcatcaccactgaatcactc
aagagcctcatccccgacatcaaacccctggcggggcaggaggctgttgtggatcttcat
gctgatgactcccgaatctctgaggatgagacagaacgtaatggcgacgatgggacccat
gacaaaggactgaaaatatgccggacagtcactcaggtagtgcctgcagagggccaggaa
aatgggcagagggaagaagaggaagaagagaaggagcctgaagcagagccccccgcgctt
ccccaggtgtcagtagaggtggccttgcccccacctgtggaacacgaagtaaagaaagta
actttaggagacactttaactcggaggtccattagccagcagaagtctggagtttccatt
acaattgacgacccagtccgaactgcccaggtgccctccccacctcggggcaagatcagt
aacattgtccatatctccaatttggttcgtcccttcacgttaggccaactgaaggagttg
ttggggcgcaccggaaccttggtggaagaggccttctggattgacaagatcaagtctcat
tgctttgtaacgtattcaacagtagaggaagccgtagccaccagaacagctctgcatggg
gtcaagtggccccaatccaatcccaaattcctttgtgctgactatgctgagcgagatgag
ctggactatcatcggggcctcttggtggaccgtccttctgaaacaaagacagaggaacag
ggggtaccaaggcccctgcatcccccacccccacccccagttcagccaccatcccacccc
cgagcagagcaacgggagcaggagcgagctgtgcgagagcagtgggcagagcgagaacgg
gaaatggagcggcgagagcgaacccgatcagaacgtgaatgggaccgggacaaagttcga
gaaggcccccgctcccgatcacggtcccgtgaccgccgtcgcaaagaacgagcaaaatct
aaagaaaagaagagtgagaagaaagaaaaagctcaggaggagccacctgccaagttgctg
gacgaccttttccgtaagactaaggcagctccctgtatctattggcttccactgacagac
atccagattgttcagaaggaggcagagcgggctgaaagggccaaggagcgggagaagcgg
cgaaaggaacaagaggaagaagaacagaaggagcgggagaaggaagctgagcgggaacgg
aaccgacagctggagcgggagaaacgtcgggagcacagcagggagagggacagggacagg
gagagagagagggacagggagcgggacagaggggaccgagatcgggagagggaaagggac
cgggaccgaggccgggagagggatcgcagagacaccaagcgccacagcagaagccggagt
aggagcacacctgtgcgggaccggggtgggcgccgctag
DBGET
integrated database retrieval system
