Nannospalax galili (Upper Galilee mountains blind mole rat): 103739801
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Entry
103739801 CDS
T03372
Symbol
Usp39
Name
(RefSeq) ubiquitin specific peptidase 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103739801 (Usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngi03041
]
103739801 (Usp39)
Spliceosome [BR:
ngi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
103739801 (Usp39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
103739801
NCBI-ProteinID:
XP_008838512
UniProt:
A0A8C6RM53
LinkDB
All DBs
Position
Un
AA seq
562 aa
AA seq
DB search
MSSRSKRESRGSVRGKRESESRGSSGRVKRERDREREPEAASGPVRVKREVEPASSREAP
APALSAVRVKREREVDEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDFEKL
CSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIID
SSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQAL
SNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAV
VLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHP
DLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFN
GITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREY
LSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMIT
LSEAYIQIWKRRDNDETNQQGA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccggtctaagcgggagtctcgtggttctgtccgcgggaagcgggagtccgag
tctcggggcagctcgggtcgcgtcaagagggagcgagatcgtgagcgggagcccgaggcg
gcgagcggcccggtgcgtgtgaagcgggaggtagagccggcgagttcgcgtgaggccccg
gcgcccgcgctctcggcagtgcgcgtgaagcgggagcgcgaagtcgacgaagactcggag
cccgagcgggaggtgcgagcaaagaatggccgtgtggattctgaggaccggaggagccgc
cactgcccatacctggataccattaacaggagtgtgctggactttgactttgagaaactc
tgttctatttccctttcacatattaatgcatatgcctgtctcgtgtgtggcaagtacttt
caaggtcggggcttaaagtctcatgcctatattcacagtgtccagttcagccaccatgtc
ttcctcaacctccacaccctcaagttttactgccttccagacaactatgagatcatcgac
tcctcgttggaggatatcacgtatgtgttgaagcctactttcacaaagcagcaaattgca
aacttggacaagcaagccaaattgtcgcgggcatatgatggtaccacttacttgccaggg
atcgtgggactgaataacataaaagccaacgactatgcgaatgctgtgcttcaggctctg
tctaatgttcctcctctccggaactatttcttggaagaagacaattataagaatatcaaa
cgtcctccaggggatatcatgttcttgttggtccagcgttttggagaactgatgagaaag
ctctggaacccccgaaatttcaaggcacacgtttctcctcatgagatgcttcaggctgtt
gtcctttgcagcaagaagacttttcagatcactaaacaaggggatggagtcgactttctg
tcttggtttctgaatgctctgcactcagctctgggtggtacgaagaagaagaagaagact
attgtgactgatgttttccagggctccatgagaatcttcactaagaagcttccccatcct
gatctgccggcagaagagaaagagcagctactccataatgatgagtaccaggagacgatg
gtggagtcaacattcatgtacctcacactggaccttcccactgcccccctctataaggat
gagaaggagcagctcatcatcccccaggtgccactcttcaacatcctggccaagttcaac
ggcatcaccgagaaggaatataagacttacaaggagaactttctgaaacgcttccagctc
accaagctgcctccatatctaatcttttgcatcaagagatttactaagaacaatttcttt
gtggagaagaacccgacgattgtaaattttcctatcacaaatgtggatctgagagaatac
ttgtctgaagaagtacaagctgtccacaagaataccacttacgacctcattgccaacatc
gtgcacgatggcaagccctctgagggctcctaccggatccatgtgcttcatcatgggact
ggcaagtggtatgaattacaagacctccaggtgactgacatcctcccccagatgatcact
ctgtccgaggcttacattcagatttggaagaggcgggataacgatgaaaccaaccagcag
ggggcttga
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integrated database retrieval system
