Nannospalax galili (Upper Galilee mountains blind mole rat): 103740192
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Entry
103740192 CDS
T03372
Symbol
Rbm12, Cpne1
Name
(RefSeq) RNA binding motif protein 12
KO
K24524
copine 1/2/3
K24526
RNA-binding protein 12
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngi03041
]
103740192 (Rbm12)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ngi04990
]
103740192 (Rbm12)
Spliceosome [BR:
ngi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103740192 (Rbm12)
Domain-containing proteins not elsewhere classified [BR:
ngi04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
103740192 (Rbm12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Copine
RRM_1
C2
vWA-TerF-like
VWA
Motif
Other DBs
NCBI-GeneID:
103740192
NCBI-ProteinID:
XP_017655534
LinkDB
All DBs
Position
Un
AA seq
1526 aa
AA seq
DB search
MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVFATDEDARLGMMRT
GGTIKGSKVTLLLSSKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNLP
TTVPNFNNPSPSVVTATTSVHESNKNIQTFSTASVGTAPPSMGASFGSPTFSSTIPSTAS
PMNTVPPPPIPPIPAMPSLPPLPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPP
MSGMPPLNPPPVAPLPAGMNGSGAPMSLNNNLNPMFLGPLNPVNPIQMNSQSNVKSLPIN
PDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEAL
KRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSMGPSGQAHPPPQTLPRSKSPSGQKRS
RSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRN
ETDYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQREVVLNPEGDVN
SAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKSEDDARK
SEHLHRKKLNGREAFVHIVTLEDMREIEKNPPAQGKKGLKMPVPGNPAVPVIPSAGMPAA
GIPAAGIPGAGMPGAGMPSAGMPAAGIPGAGMPGTGMPGAGTPGTGMPGAGIPGAGIPGA
GIPGAGIPGAGMPGPAIPGPAIPSATIPGAAIPGPTMPGAGIPSAGGEEHVFLTVGTKEA
NNGPPFNFPANFGGSNAFGPPLPPPGLGAAFGDVRPVMPSVGNSGLPGLGLEVPGFGGGP
NSLSGPSGFGGVPQNFGNGPGSLGAPPAFGSGPPGLGSVPGHLSGPPAFGPGPGPGPIHI
GGPPGFGASSGKPGPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEA
MVAFESRDEATAAVIDLNDRPIGSRKVKLMACCVTLVQLSISCEHLTDKDIGSKSDPLCV
LLQDVGGGIXAELCRTECVRNCSSPEFSRTLXIEYHFETVQKLCFRIYDIDXPELGDDDF
LGGAECSLGQIVSSQTLTLPLMLKPGKPAGQGTITVSAQELKDSRIVTMEVEARNLDKKD
LLGKSDPFLEFFHQRDGKWHLTYRSNVIKNNLNPTWECFSVPLLHFCGGDPSIPIQVHCS
DYDSNGSHDLIGTFHTTLAQLQAVPAEFECIHPEKQKKKKSYKNSGIICVKTCRVETEYS
FLDYVMGGCQINFTVGVDFSGSNGDPSSPDSLHYLSPMGVNEYLTALWSVGSVVQDYDSD
KLFPAFGFGAQVPPDWQVSHEFALNFNPNNPYCAGIQGIVDAYRQALPQVHLYGPTNFAP
IINHVTRFAAQAAQQRTASLRAQYFVLLLLTDGAATDVEATREAVVQASKLPMSVIIVGV
GGADFEAMEQLDADGPLRTRHGEAAARDIVQFVPYRRFQNAPREALAQTVLAEVPTQLVS
YFRAQGWAPLKTPPFPGKGPVQVLQA
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgtttgcaaggtctcccaattgtagcggggaccatggacattcgc
cacttcttctctggattgaccatccctgatgggggcgtgcatattgtagggggtgaactg
ggtgaggctttcatcgtttttgccactgatgaagatgcaaggcttggtatgatgcgcaca
ggtggtacaattaaagggtcaaaagtaacactgttgttgagtagtaaaacagaaatgcag
aatatgattgaactgagtcgtaggcgttttgaaactgccaacttagatataccaccagca
aatgctagtagatcaggaccaccacctagctctggaatgagcagcagggtaaatttgcct
acaacagtacccaactttaataatccttcaccaagtgtagttactgctaccacttctgtt
catgagagcaacaaaaacatacagacattttccacagccagcgtaggaactgcacctcca
agcatgggggcttcttttggtagtccaacgttcagctcaaccattccgagtacagcttct
ccaatgaacacagtcccaccaccaccaattcctccaatcccagcaatgccatctttgcca
ccgctgccatccattcctccaataccagttcctcctccagtacctacattgcctcctgtg
cctccagttccccctatcccccctgtcccttctgtgccacccatgaccccattgccaccc
atgtcaggcatgccacccttgaatccaccacccgtggcacctctacctgctggaatgaat
ggctctggagcacctatgagtctgaacaataatctgaaccctatgtttctgggtccacta
aatcctgttaaccctatccagatgaactctcaaagcaacgtgaagtcacttcccatcaac
cctgatgatctgtatgtgagtgtgcatggaatgcccttttctgcaatggaaaatgatgtc
agagagtttttccatgggctccgtgttgatgcagtacatttgttaaaagatcatgtaggt
cgaaataatgggaatggattggttaagtttctctcccctcaagatacgtttgaagccttg
aaacggaacagaatgctgatgattcaacgctatgtggaagttagtcctgccacagagaga
cagtgggtagctgctggaggtcatatcacttttaagcaaagtatgggaccttctggacaa
gcccatccccctccacagacacttccaaggtcgaaatcgcccagtgggcagaaaaggtca
aggtcaagatcaccacatgaggctggtttttgtgtttacttaaaagggctaccatttgaa
gcagaaaacaaacatgtcattgatttttttaagaagttggatattgtagaggatagtatt
tatatagcttatggacccaatgggaaagcaactggtgaaggctttgtagaattcaggaat
gagactgactataaggctgctctgtgtcgtcataaacaatacatgggcaatcgctttatt
caagttcatccaattactaagaaaggtatgctagaaaagatagatatgattcgaaaacga
ctccagaacttcagctatgaccagagggaagtggtgttaaatccagagggggatgtcaac
tctgccaaggtctgtgcccacataacaaatattccattcagcattaccaagatggacgtt
cttcagttcctagaaggaattccagtggatgaaaatgctgtacatgttcttgttgataac
aatgggcaaggtctagggcaggcattggttcagtttaaaagtgaagatgatgcacgtaaa
tctgaacacttacaccgtaaaaaactgaatgggagagaagcttttgttcatatagttacc
ctagaagatatgagagagattgagaaaaatcccccagcccaaggaaaaaaggggttaaag
atgcctgtgccaggtaatcctgcagtaccagtaatacctagtgcagggatgccagctgct
ggaattcctgctgctggaataccgggtgctgggatgccaggtgctggaatgcctagtgcg
ggcatgccggctgctggaatccctggtgccggaatgcccggtactggaatgcctggtgcc
ggaacacctggtactggaatgcccggtgccggaatccccggtgctggaatccctggtgcc
ggaatccccggtgctggaatccctggtgctggaatgccgggtcctgcaatacctggccct
gcaatacctagtgccacaattcctggtgccgcaatccctggtcccacaatgcctggtgct
ggcatccccagtgcaggaggtgaagagcatgtcttcttgactgtaggaacaaaggaggcc
aataatgggcctccctttaacttccctgccaattttggtgggtccaatgcctttggacca
ccactccctcctccggggttaggagcggcctttggtgatgttaggcctgttatgccttca
gttggaaacagtggtttgcctggtctaggattggaagttccaggttttggaggtggacca
aatagtttaagtggaccatcaggatttgggggggttcctcagaattttggaaatggccct
ggtagtttaggtgccccccctgcttttggaagtggtcctcctggtcttggaagtgttcct
gggcatttgagtgggcctccagcctttggccctggccctgggcctggcccaattcatatt
ggtggtccccctggctttggagctagttctggcaaaccagggcctacaataattaaggtg
caaaatatgcccttcactgtatctattgatgagattttagatttcttttatggttatcaa
gtaatcccaggttcagtatgtttaaagtacaatgaaaaaggtatgcctacaggtgaagcc
atggtggcctttgaatctcgggatgaagccacagctgctgtcattgacttaaatgatagg
ccaataggttcaagaaaagtaaaactcatggcctgctgtgtgaccttggttcagctgtcc
atttcctgtgaacatctcactgacaaggacatcggctccaaatctgatccactctgcgtc
cttttgcaggatgtgggagggggcatctaggctgagctttgccggactgagtgtgttcgg
aactgttcaagccctgagttctccaggactctgtagattgagtaccatttcgagacagtc
cagaagctatgttttagaatctatgacatagacnnaccagagctgggggatgatgacttc
ctagggggagctgagtgttccctgggtcagattgtgtccagccaaacactcactctcccc
ttgatgttgaagcctggaaaacctgctgggcagggaactatcacggtctcagctcaggag
ctgaaggacagtcgtatagtaaccatggaagtggaagctaggaacctagataagaaggac
ttacttggaaaatcagatccattcctggagtttttccaccaacgtgatggaaagtggcac
ttgacatacaggtctaatgtgatcaagaacaacctgaaccctacatgggagtgcttctca
gttcctctcctgcatttctgtggtggtgaccccagcatacccatccaggtacactgctca
gactatgacagcaacgggtcacatgatctcattggtaccttccacaccaccctggcccag
ctgcaagcagtcccggctgagtttgaatgtatccaccctgagaagcagaagaaaaagaaa
agctacaagaactctggaattatctgtgtcaagacttgtagggtagaaacagagtattcc
ttcctggactatgtgatgggaggctgccaaatcaacttcactgtgggtgtggacttcagt
ggctccaatggagacccatcttcacctgactccctgcactatctgagtcctatgggagtc
aacgagtatctgacagcactgtggagtgtgggcagcgtggttcaggactacgactcggac
aagctgtttccagcatttgggtttggagcccaggtgcccccagattggcaggtctcacat
gaatttgccttgaacttcaatcccaataatccctattgtgcaggcatccagggcattgtg
gatgcctaccgacaagcattgccccaagttcacctctatggacccaccaactttgcacca
atcatcaaccacgtgaccaggtttgcagcccaggctgcacagcagaggactgcttcgttg
agagctcaatactttgtgctgttgctcttgactgatggagctgcgacagatgtggaggcc
acacgtgaggctgtggtgcaagcctcaaagctgcccatgtccgtgataattgtaggtgtg
ggtggtgctgactttgaagccatggaacagctggatgctgatgggcctcttcgtactcgc
catggagaggcagctgcccgggacatagtacagtttgtgccttaccgccgatttcagaat
gccccacgggaggcattggcacagactgtgcttgcagaagtgcccactcagctggtatcc
tacttcagggctcaaggttgggccccattaaagacacctccattcccaggcaagggtcct
gtgcaggtccttcaggcctag
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