Nannospalax galili (Upper Galilee mountains blind mole rat): 103740196
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Entry
103740196 CDS
T03372
Symbol
Rbm39
Name
(RefSeq) RNA binding motif protein 39
KO
K13091
RNA-binding protein 23/39
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngi03041
]
103740196 (Rbm39)
Spliceosome [BR:
ngi03041
]
Common components
Common spliceosomal components
General mRNP proteins
103740196 (Rbm39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
103740196
NCBI-ProteinID:
XP_008838984
UniProt:
A0A8C6RBB7
LinkDB
All DBs
Position
Un
AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggccccttacaagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgtagcaaaaagagaaaaaaaagcaagagc
agaagccgtagtcatgagcgaaagcgaagcaaaagtaaggaacgcaagcgaagtagagat
agagaaaggaaaaagagcaaaagccgtgaacggaaacgaagtagaagcaaagagaggaga
agaagtcgctcacgaagtcgagatcgcagattccgaggccgctacagaagtccctactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgttcccgaagcaaaagtccattcagaaaagacaagagccctgtaagggaa
cctattgataatctaactcctgaggaaagagatgcaaggactgttttctgcatgcagctg
gcagcaagaattcgaccaagagatttggaagagtttttctctacagtcggaaaggttcgt
gatgtgaggatgatttctgatagaaattcaagacgttccaaagggattgcatatgtggag
tttgtcgatgttagttcagtgcctctagcaataggattaactggccaacgagttttaggt
gtgccaatcatagtacaggcttcacaggcagaaaagaacagagctgcagcaatggcaaac
aatttacaaaagggaagtgctggacctatgaggctttatgtaggctcattacactttaat
ataactgaagacatgcttcgggggatctttgagccttttggaaggattgaaagtatccag
ctcatgatggatagtgaaacaggtcgatctaagggatatggatttattacattttctgac
tcagaatgtgccaaaaaggctttggagcagcttaatggatttgaattagctggaaggcca
atgaaagttggtcatgttactgaaagaactgatgcttctagtgctagttcatttttggac
agtgatgaattggaaaggactggaattgatttgggaacaactggtcgtcttcaattaatg
gcaagactggcagagggtacaggtttgcagattccaccagcagcacagcaagctttacaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acacgactttcccaacagactgaagcctctgctttagctgcagctgcatctgttcaacca
ctagcaacacagtgtttccaactctctaacatgttcaatcctcaaacagaagaagaagtt
ggatgggatacagagattaaagatgatgtgattgaagagtgtaataaacatggaggtgtt
attcatatttatgttgacaaaaattcagctcagggcaatgtatatgtgaagtgcccatct
attgctgcagctattgctgctgtcaatgcattacatggcagatggtttgctggtaaaatg
attacagcagcatatgtacctcttccaacttatcacaacctctttcctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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