Nannospalax galili (Upper Galilee mountains blind mole rat): 103740312
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Entry
103740312 CDS
T03372
Symbol
Rb1cc1
Name
(RefSeq) RB1 inducible coiled-coil 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04140
Autophagy - animal
ngi04211
Longevity regulating pathway
ngi05010
Alzheimer disease
ngi05014
Amyotrophic lateral sclerosis
ngi05016
Huntington disease
ngi05017
Spinocerebellar ataxia
ngi05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103740312 (Rb1cc1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
103740312 (Rb1cc1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
103740312 (Rb1cc1)
05014 Amyotrophic lateral sclerosis
103740312 (Rb1cc1)
05016 Huntington disease
103740312 (Rb1cc1)
05017 Spinocerebellar ataxia
103740312 (Rb1cc1)
05022 Pathways of neurodegeneration - multiple diseases
103740312 (Rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ngi01009
]
103740312 (Rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngi04131
]
103740312 (Rb1cc1)
03029 Mitochondrial biogenesis [BR:
ngi03029
]
103740312 (Rb1cc1)
Protein phosphatases and associated proteins [BR:
ngi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103740312 (Rb1cc1)
Membrane trafficking [BR:
ngi04131
]
Autophagy
Autophagosome formation proteins
ULK complex
103740312 (Rb1cc1)
Mitochondrial biogenesis [BR:
ngi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
103740312 (Rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
SpoIIID
Motif
Other DBs
NCBI-GeneID:
103740312
NCBI-ProteinID:
XP_008839128
LinkDB
All DBs
Position
Un
AA seq
1591 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILCDRAPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSDYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLNEQEVSEKAMMKRSTEL
VLSPDMPRTTNTSLLTSFHKSVEHIASDTTDGQSGEEISESCQSAVQQDETSVDAKDSEL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPKIIQPFMLECHQTIAKLDNQNMKA
IKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAEKSKRESFGKL
FRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLNEQKVSTSQASPQSASSPRIESTTG
ITTTTSPKTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNTEQTIHQASLDL
DSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTN
ACGKEDFGVHASLHVQLEKCRVVAQDTHFSIQAIKEDLYHFRTFVQKEQCDFSNSLKCTA
VEIKNIIEKVKCSLEITLKENHQKELQSLKTEYEGKLDALAKEREENENKIKKLKGDLVC
LEEVLQNKDNEFALVKHEKEAVICMQNEKDQKLLEMENIMHTQNCEIKELKQSREVALED
LKKLHVENDERMELLRAELQCLEQSHLKELEDTLHVRHTQEFEKVVTDHKVSLEKLKKEN
QQRIDQILDSHASTLQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEES
RTQQKETLKSLLEKETESLRTEINKLNQKIQDNNENYQVGLSELRTLMTIEKDQCISELI
SRHEEESNILKAELDSVTSFHHQALEIEKHLKEQIVELQSKLDSELSALERQKDEKITQQ
EEKYDAIIQNFEKDKEKLVMSHKQDREQLIQQLNYEKDEAIQTALKEFALERELVEKDLL
EKLKHLENQIAKSPALESTREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVR
TSLIAEQQTNFNTVLTREKMRKENIINDLSEKLKSTMQQQERDRDLIESLSEDRARLLEE
KKKLEEEVSKLRSSSFIPSPPIVAAPELYGACAPELPGDTARSETVDEGRVDSAMDTSMM
SVQENIHLLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQV
GDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVMEKE
YCQAKKAQNRFKVPLGTKFYRVKAVSWSKKV
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtgtttcttgtcaacactggaactactctgacatttgacactgaacta
acagtgcaaactgtggctgaccttaagcatgccattcaaagcaaatacaagattgctatt
cagcaccaggtgctggtggtcaatggaggagagtgcatggctgcagatcgaagagtgtgc
acctacagtgctgggacggacacaaatccaatttttctttttaacaaagaaatgatcttg
tgtgaccgtgcacctgctattcctaaaactaccttttcaacagaaaatgacatggaaata
aaagttgaagagtcactcatgatgcctgcagtttttcacactgttgcttcaaggacacaa
cttgcagtggaaatgtatgaagttgccaagaaactgtgttcattttgtgaaggtcttgtc
catgatgaacatcttcaacaccaaggctgggctgcaatcatggccaatctggaggactgt
tcaaactcataccaaaagctgcttttcaagtttgaaagtatttattcagattatctgcaa
tccatagaagacatcaagttaaaacttactcatttaggaactgcagtttcagtaatggcc
aagattccactgttggagtgcctaaccagacatagttacagggaatgtttgggaagactg
gattctttaaatgaacaggaagtctcagagaaagccatgatgaaaagatccactgaactg
gtgctttctcctgatatgcctagaacaacaaacacatctttattaacctcatttcacaag
tcagtggaacacatagcttcagataccacagatggtcaaagtggtgaagaaattagcgaa
tcttgtcaaagtgctgtccaacaagatgaaacttcagtggatgctaaagacagtgaactg
cctttttttaatgtttctttgttagactggataaatgttcaggatagacctaatgatgtg
gaatctttggtcagaaagtgctttgattctatgagcaggcttgacccaaagattattcaa
ccatttatgttagaatgccatcagactattgccaaacttgataatcagaatatgaaagcc
attaaagggcttgaagatcggctgtatgccctggaccagatgattgccagctgtggccgg
ctggtcaatgaacagaaagagctcgctcagggatttttagctaatcagatgagagctgaa
aacttgaaggatgcatctgtgttacctgatctgtgcctgagtcacgcaaatcaattgatg
attatgttgcaaaaccatagaaaactgttggatattaaacagaagtgcaccactgccaaa
caagaactagcaaataatctacatgtcagactgaagtggtgttgttttgtgatgcttcat
gctgatcaagatggagagaaactacaagcattgctccgccttgtaatagagctgttagaa
agagtcaaaattgttgaggctcttagcacagttcctcagatgtattgcttagctgttgtt
gaggttgtaaggagaaaaatgttcattaaacactacagagagtgggctggagctttagtc
aaagatggaaagcagttgtatgaagctgaaaagtccaaaagggaatcttttgggaagtta
tttaggaagtcttttttaagaaatcgtctgtttaggggactggactcctggcccccctcc
ttttgtactcagaaacctcgaaagtttgactgtgaacttccagatatttcattaaaagat
ttacagtttctgcaatcattttgtccttcagaagtgcagccattcctcagggttccctta
ctttgtgactttgaacctctacaccagcatgtacttgccctacataatttggtaaaagca
gcacaaagtttagatgaaatgtcacagacgattacagatctgctgaatgaacaaaaggta
tccacaagtcaggcatccccacagtcggcttcttccccaaggatagaaagtacaacagga
attacaactactacctcaccgaaaactcctcctccgcttactgttcaggatcccttatgt
cctgcagtgtgtcccttagaagaattatctccagatagcattgatgcacatacatttgat
tttgaaactatcccccatccaaacacagaacaaactatacaccaagcttctttagacttg
gattcattagctgaaagtcctgagtctgattttatgtctgctgtgaatgagtttgtgata
gaagaaaatttatcatctcctaatcctataagtgatccacaaagtccagaaatgatggtg
gaatcattgtattcatcagtcattaatgcaatagatagtagacgaatgcaggacacaaat
gcgtgtggtaaggaggacttcggagttcatgcttctttgcatgtccagttggaaaaatgt
agagttgttgcccaggacactcacttcagtatacaagccatcaaggaagacctataccac
ttcagaacatttgttcagaaagaacagtgtgacttctcaaattctttaaaatgtactgca
gtagaaataaaaaacattattgaaaaagtaaaatgttctctagaaataacactaaaggaa
aaccatcagaaagaactacagtctttaaagactgaatatgaaggcaagcttgatgctcta
gcaaaggagcgtgaggaaaatgaaaataaaattaaaaaattgaaaggagacttagtttgt
cttgaggaggttttacaaaataaagacaatgaatttgctttggttaaacatgaaaaggaa
gctgtcatctgcatgcaaaatgaaaaggatcagaagttattagagatggaaaatataatg
cacactcagaattgtgaaattaaggaactgaagcagtctcgagaggtcgccctagaagac
ttaaagaagctgcacgtggaaaatgatgagaggatggaattgctgagagcagagcttcag
tgcctggagcagagccacctcaaggaactggaggacacactgcatgtcaggcacacgcag
gagtttgagaaagttgtgacagaccacaaagtatctttggagaaattgaaaaaggaaaat
caacaaagaattgatcagatattggactctcatgcctcaactctccaggaaaaagaacag
cagttacaggaattgaaactcaaggtttccgatttgtcagacatgagatgcaaattagag
gttgaacttgcattaaaggaagcagaaactgatgaaataaaaattttgttggaagaaagt
agaacacagcagaaggaaactttgaaatctcttcttgaaaaagagacagaaagtttgaga
acagaaataaataaactcaatcaaaagattcaagataataatgagaactatcaggtgggc
ttatcagaactaagaactttaatgacaattgaaaaagatcagtgcatttcagagttaatt
agcagacatgaagaagagtctaatatccttaaggctgagttagacagtgtaacatctttc
catcaccaagcacttgaaatagaaaaacacctgaaagaacaaattgttgaactgcagagt
aaattggattcagaattgagtgctcttgaaagacaaaaagatgaaaaaataacccaacag
gaagagaaatatgacgctattattcagaactttgagaaagacaaagagaaattggtcatg
agccacaagcaagacagagaacagttaattcagcagcttaattatgagaaagatgaagct
attcagactgcactaaaggaatttgcattggagagagaacttgttgagaaagacttatta
gaaaaacttaaacatcttgaaaatcaaatagccaaaagtcctgcccttgaatctaccaga
gaagattcttcaagcttagttgctgaacttcaagaaaagcttcaggaagaaaaagcaaag
tttctagaacagcttgaagaacaagaaaaaagaaagaatgaagaaatgcagaatgttcgg
acatctttgatcgctgaacagcagaccaattttaacactgttttaacaagagagaagatg
aggaaagagaacataataaatgaccttagtgaaaagttaaagagcacaatgcagcagcaa
gagcgagatagagatttgatagaatcactttctgaagatcgagctcgtttgcttgaggaa
aagaaaaagcttgaagaagaagtcagtaaattgcgtagcagcagttttattccgtcacca
cctatagttgctgccccagagctttatggagcttgtgcgcctgagctcccaggtgacaca
gctaggtcagagacagtagatgaaggaagagtggattcagcaatggacacaagcatgatg
tctgtccaggaaaacattcatctgctttctgaagaaaaacagaggataatgcttttagag
cgaacattgcagttgaaagaagaagaaaacaagcgcttaaatcaaagactgatgtctcag
agcatgtcttcagtctcttccagacattctgaaaaaatagctattagagattttcaggtg
ggagatttggtactcatcatcctagatgagcggcatgacaattacgtgttgttcactgtc
agtcctactctgtattttctgcattcagagtctctgcctgccctggatctgaaaccaggt
gagggcgcttcaggtgcatctagaagaccctgggtccttggaaaagtcatggaaaaggaa
tactgtcaagccaaaaaggcacaaaacagattcaaagttcctttggggacgaagttttac
agagtgaaagctgtttcgtggagtaagaaggtgtag
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integrated database retrieval system
