Nannospalax galili (Upper Galilee mountains blind mole rat): 103740464
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Entry
103740464 CDS
T03372
Symbol
Thoc5
Name
(RefSeq) THO complex 5
KO
K13174
THO complex subunit 5
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03013
Nucleocytoplasmic transport
ngi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103740464 (Thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
103740464 (Thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103740464 (Thoc5)
03041 Spliceosome [BR:
ngi03041
]
103740464 (Thoc5)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
103740464 (Thoc5)
Spliceosome [BR:
ngi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103740464 (Thoc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
103740464
NCBI-ProteinID:
XP_008839311
LinkDB
All DBs
Position
Un
AA seq
695 aa
AA seq
DB search
MSSESSKKRKPKVIRSDGAPAEGKRSRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSRGGKDVAFEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVTLEEFYTEAPPNISKAEITM
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACAHMKSSSQPPRQDKTLSV
AIEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSV
LLDLKCKDSSVLHLTFYYLMNLNIMTVKAKVTTTMELITPISAGDLLSPDSVLSCLYPGD
HGKKTPNPANQYQFDKVGILSLRDYVLELGHPYLWVQKLGGLHFPKEQPQHTVMADHSQS
ASHMETTMKLLKTRVQSRLALHKQFASLEHGIVPVTSDCQCLFPAKVVSHLVKWVMIPHE
DYMDLLFTKDIVEAGLAGDTNLYYLALIERGTAKLQAAVVLNPGYSSIPPIFRLCLNWKG
EKTNSNDDNIRAMESEVNVCYKELCGPRPSYQLLTNQLQRLCVLLDVYLETESHDDSVEG
PKEFPQEKMCLRLFRGPSRMKPFKYNHPQGFFSHR
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagaatccagcaaaaaacgcaaacccaaagtgatccgaagcgatggcgctcca
gctgaaggaaaacggagtcggtctgacactgagcaggaaggcaaatactacagtgaggaa
gccgaagttgacctgcgggaccctggcagagactatgagttatacaagtacacttgccaa
gagctacaaagattgatggctgagatccaggacctaaagagcaggggtggaaaggatgtg
gctttcgaaattgaagaacgaaggatccaaagctgtgtgcatttcatgactctaaagaag
cttaaccgattagcacacatcaggttaaagaaaggaagagatcagacccatgaggctaag
cagaaagttgatgcttatcacctgcagctacagaacctgctttatgaagtgatgcacctg
caaaaggagatcaccaaatgtctcgagtttaagtcaaagcatgaagaaatcgatctggtt
accttagaggaattttatacagaggctccaccaaacatcagcaaggccgaaatcacgatg
ggagaccctcatcaacagaccctggcacgtctggactgggagctggagcagcggaaaagg
ctggcagagaagtaccgagagtgtctgtccaacaaggagaagatcctgaaggagattgag
gtgaagaaggagtacctgagcagccttcagcctcgcctcaacagcatcatgcaggcttcc
ctcccagtgcaggaatacctgttcatgccatttgaccaggctcacaagcagtatgagact
gccaggcacctgccacctcccctctacgtgctctttgtccaggccactgcatatggtcag
gcctgtgctcatatgaaatcctcctcccagccccctagacaggataagacattgtctgtg
gcaattgaaggcagtgtggatgaagccaaagctctcttcaagccccctgaggactctcaa
gatgacgagagtgactcagatgctgaggaagagcagaccacgaaacggcggcgacccaca
ctcggggttcagttggatgacaagcgcaaggagatgctgaagaggcacccgctatctgtt
ttgcttgatctgaagtgtaaagacagcagtgtgcttcacctgactttctactacctcatg
aacctcaacatcatgacagtaaaagccaaagtgacaactaccatggagctgatcaccccc
atcagtgcaggagacttgctgtctcctgactcagtcctgagctgtctgtatcctggggat
catgggaaaaaaactccgaatccagccaatcagtatcagttcgacaaagttggcatcctg
agtttgagagactatgtacttgaattaggccacccctatttgtgggtacagaagcttggt
ggcctccacttccccaaagaacagcctcagcatacagtgatggccgaccattcacaaagc
gccagccacatggagaccaccatgaaactgctcaagaccagggtgcagtcccgcctggct
ctccacaaacagtttgcatctctggaacatggcattgtgccagtcaccagtgattgccag
tgcctcttccctgccaaggttgtttctcacctggtaaagtgggtgatgattccccatgaa
gattacatggatctgcttttcactaaggacattgtagaggcaggactggctggggacacc
aatctctactatctggcacttattgaaagaggcacagccaaacttcaggctgctgtggta
ttgaaccctggttactcctccatcccacccattttccggctctgtctgaattggaaaggg
gagaaaaccaatagcaacgatgacaacattcgggctatggagagtgaggtcaacgtgtgc
tataaggagctgtgtggtccccggcccagctaccagctcttgaccaaccagctgcagaga
ctatgtgtgctgttggatgtctacctggagactgagagccatgatgacagtgtagaaggg
cccaaggaatttccccaggagaagatgtgcttgcggcttttcaggggtccaagcaggatg
aagccatttaaatataatcatcctcaaggatttttcagccatcgctga
DBGET
integrated database retrieval system
