KEGG   Nannospalax galili (Upper Galilee mountains blind mole rat): 103740573
Entry
103740573         CDS       T03372                                 
Symbol
Mdc1
Name
(RefSeq) mediator of DNA damage checkpoint 1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
ngi  Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:ngi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ngi03400]
    103740573 (Mdc1)
DNA repair and recombination proteins [BR:ngi03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    103740573 (Mdc1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 103740573
NCBI-ProteinID: XP_008839460
LinkDB
Position
Un
AA seq 1483 aa
MTSFLPQIMEDTQAVCWDDDDDEEEDKKQQEGTEGSREPLQCKLEPVGQLHIFSSTHGPE
TDFPLYLGKNVVGRNPDCSVVLPFPSISRCHAEIKISAWDKAPLLQDCGSLNGTHIIRPP
KALGRGVSHRLRDQEFFLFANLPCQYRHLNVPLHLVSRGPLLIEETPRLQGRSQSSRVLL
AEDSDEERSFPSGRRVVNGSRTVSSPTATVVPESDEEGPSPDVSGSCLAFKMDSDTEEEL
GQQSGVGAAPAEAGRATGIQLVNIQPTKQRSKDTKVKRKAGSGVAVGSILERCSHLGQDS
DTDVDEEHQPSGFVDSDTDVEQIPATPVVVPVRKRLALHGVSTRGPGASAVAHLQDSPAG
GVRDMEEGAAPHASTLERSHITVVISSDTDDEEAASVALTLAHLKGSSAGAASWSRDPAV
GEAQLQVLQQSQSASGRDSDTDVEDEGPPGCKKETVPNHPVDRDSEDLCLPETQCFVKRE
RESPEAVPSLEDEPTQAFLYVLPQELDSSHCRLRTPGPGALGVPWEDLATQPFDPSEFDA
EPQPTAIHPEVHGSLPRAPPQHPNLVYTSQVHTEPLGIQGSEMQTMEKAMGIPKETVERV
TPGRGPPEREMRERPPDTEQEHVMGEELTWGTEDRLQKQVFTGDRQTQESDRVKSGNPEG
DRESMKVETETAKDQQEGEGPGPERKGKPAGPERTLARRPTMERSHDQEGQVTSPTPEPE
VGAEELEGLASTLVVSGSQGDGGKGDPVSPGRKQRGQLSCKMPSAAKKGCRESPAPRLLP
TVPGTSAPPQSTSQIQKHSAPQPLISPSSPSEQHLCETPHIKPNVGSRRSSRITSPPSSA
ASPTDQPAAPRPISRATRGRATRFSIRTPEPIVPTNSELQLPASTDQPVIPKPPSWRVTR
GRTSRSSVKTPEPVIPTGPEIQPPMSIDQPVTPNLIFCSTRGRPSKSFVKTPEPLVSFDP
KLQPPTSTDQTAIPKSTSRVTRVRTNRSSAKTLEPVVPIGPELQPPTSTNQPVTPNLTSQ
STRGRPSKSSIETPEPDVPTAPEFQPPIPIGQPVIPEATGQSRTLKSSSLNTAPVSTPTE
QPPVATAKPAPLDPVAQVSHGRKRRAAGKQGSHTVPISRKPCSILSEPESQPSTQQSLGA
KPLAATPEPAGPQLPETLTHAQAALIQNQTAVLTPELKPEASEILKRLSTTTDSLPLQKH
PRREVSQKTLFPKEEDVGKLSIKEEVSIKEEPQDQAIPEPGKRKRDHGEDELQGTSNRSL
RRTKPNQEAEAPKVLFTGVVDSRGERTVLSLGGSVASSVNEASYLVTDRIRRTVKFLCAL
GRGIPILSLNWLYQSRKAGYFLPPDEYLVTDAEQEKNFNFSLRDSLNRAQEQRLLQGYEI
HVTPGVQPPPPQMGEIINSCGGTVLPSMPRSYKPHRVVITCAQDLPRCTTPSRLGVPLVS
SEFLLTGVLRQEATPEAFVLSSLETLPTGKHTDTHRDTTHTQT
NT seq 4452 nt   +upstreamnt  +downstreamnt
atgacatcgtttcttccccagatcatggaggacacccaggctgtttgctgggacgatgat
gatgatgaggaggaggacaagaagcagcaagaggggacagaaggatccagggaacccctg
cagtgtaaactggagcctgtagggcagctgcacatcttcagcagtacccatggaccagaa
acagatttcccactctaccttggcaagaatgtggtcggccgaaaccctgactgctctgtg
gtcctgccttttccatccatctccagatgccacgcggagattaaaatttcagcttgggac
aaggcacctcttctccaggattgtgggagcctcaatggtactcacattatcaggcctcct
aaggccctaggccgtggggtgagccatcgtctgagagaccaggaattttttctgtttgcc
aacttgccctgccagtaccgtcacctaaatgtcccgctgcacttggtctcccggggccct
ctcctcatagaggagacccccagactacagggaagatcccagtcttccagggttctgttg
gcggaggactcagacgaggaaaggagttttccttcaggaaggcgtgtggtaaatggatca
aggaccgtgtcctcccctacagcaacagtagttccagaaagtgatgaagaggggccttct
ccagatgtctctgggtcatgtttggccttcaagatggacagtgacacagaggaagaacta
ggtcagcaatcaggagtcggggcggcccctgcagaggcgggaagggcaacaggcatccag
ctggtaaacattcagcctaccaagcagaggtccaaagacacaaaagtcaagaggaaggca
ggcagcggtgtggctgttggttccatcctggagaggtgctcccatcttgggcaggacagt
gacacagatgtggatgaagagcaccagccttctggctttgtggacagtgatacggatgtg
gaacagatccctgccaccccagttgtagttcctgtgaggaagaggctggccctgcatgga
gtcagtaccaggggtcctggagcatccgctgtggcacatctacaggacagcccagctggt
ggtgtcagggacatggaggagggtgcggcccctcacgccagtactttggagagaagccac
atcactgtggtgatcagcagcgacacagatgatgaggaagcagcctcagtggcactcacc
ttggcccatctgaaagggagcagtgctggagctgcttcgtggagcagagatccagctgtg
ggggaggcccagctgcaggtcctgcagcaaagccaaagtgcctctggcagagacagtgac
acagacgtggaagacgagggaccgccagggtgcaagaaagagactgtccccaaccacccc
gtggacagagattctgaagatctgtgccttccagagacccagtgctttgtgaagagggag
agggagagcccagaagcagtcccgagcttggaagatgagccaacccaagccttcctgtac
gttctcccccaggagcttgacagttcccactgcaggttgcggactccaggtccaggtgcc
ttgggtgtgccttgggaagacttggctacacagccatttgatccgagtgaatttgatgct
gagccccagcccactgccattcaccctgaagttcatggatctctacctagggcaccacca
caacacccaaatctggtttataccagccaagttcacacagagccattggggattcaaggc
agcgagatgcagactatggagaaagccatgggtataccaaaggaaacagtagagagggtg
acccctggcagagggccaccggagagggaaatgagggaaagaccaccagatacggagcaa
gaacatgtgatgggagaagaactaacttgggggacagaggacaggttgcagaagcaggtg
ttcactggagacagacagacacaagagtctgacagggtgaagagtgggaatcctgaaggg
gatagggagagcatgaaggtagaaacagagacggccaaagaccagcaagagggagaggga
ccaggaccggagagaaaggggaagccagctgggccagaaaggaccctggctagaaggcca
acgatggaaaggagtcatgatcaagaagggcaggttaccagtccaacgccagagcctgaa
gttggggcagaggaacttgagggacttgcttcaaccctggtagtttctgggagccaggga
gatggaggaaagggagaccctgtgagccctgggaggaagcagagaggccagttaagttgc
aagatgccatctgctgctaagaagggttgtcgagaatccccagctccacgcctgcttcct
acggtgcctggcacctcagccccaccccagagtacctctcagatccaaaagcattctgca
cctcagcctttgatttctccctcttccccttctgagcagcacctttgtgagactcctcac
ataaagcctaatgttgggtcccggcggtcctccaggataacctctccaccttcctctgct
gcctcacccacagaccagcctgctgcccctaggcccatatctcgggccactaggggcaga
gcaactaggttctccatcaggaccccagaaccaattgttcccacaaactctgagctccag
cttcctgcctccacagaccagcctgtcatccccaaacctccatcttggagggttactagg
ggcaggacaagtaggtcctctgttaagactcctgagccagttatccccacaggtcccgaa
atccagcctcccatgtccatagaccagcctgtcacccctaaccttatattttgcagtact
cggggcaggccaagtaagtcctttgttaagaccccagaaccacttgtctcctttgacccc
aaactccagcctcccacctccacagaccaaactgccattcccaaatccacatctcgggtc
actcgggtcaggacaaataggtcctctgctaagactctggagccagttgtacccataggt
cctgagcttcagcctcccaccagcacaaaccagcctgtcaccccaaacctcacatctcag
agtactcggggcaggccaagtaagtcctctattgagactcctgaaccagatgttcccaca
gcccctgaattccaacctcctatccccataggccagcctgtcatccctgaggccacaggt
cagagcaggacactaaagtcttcatccctaaatactgcccccgtctccacccccactgaa
cagccccctgtcgccacagccaagcctgctcccctggaccctgttgctcaggtcagtcat
ggcaggaagcggagggctgctggaaagcagggctcccacacagttcccatcagccgcaag
ccttgctccatactctctgaacctgagtcccagccctcaacccagcaaagcttgggagcc
aagccccttgcagccactcctgagcctgctggtccccagcttcctgagaccctgactcac
gctcaagctgccctgatccagaaccaaacagcagtgctcactccagagctcaagcctgag
gcctcagaaatcctcaagagactttccactaccacagactcactaccacttcaaaaacat
ccccgaagagaagtctcccagaaaactctgttccccaaggaagaagatgtgggcaagttg
tccattaaagaagaggtgtcgattaaggaagagcctcaggatcaagcaattccagagcca
gggaagagaaagcgggaccatggagaggacgaactccaggggacctcgaatcgcagcctc
cgaaggaccaaacctaaccaagaagcagaagcccccaaagtgctcttcactggcgtcgtg
gactctcgtggggagcggactgtgctatctctgggaggcagtgtggccagctcagtgaat
gaggcctcttacctggtcactgatcgcatccgaaggacagtcaagttcttgtgtgccctg
ggcagggggatccccatcctctctctgaactggctgtatcagtctcgaaaggctggttac
ttcttgccccctgatgaatacttggtgactgatgctgagcaggaaaagaactttaacttc
agccttcgggactccctgaaccgggctcaggagcaaagactactgcagggctatgagatt
catgtgacccccggagtgcagccacccccacctcagatgggagagatcatcaactcctgt
ggaggcacagtcctgcccagcatgccccgctcctacaagcctcaccgcgttgtcataaca
tgcgcccaagacttacctcgctgcaccaccccatctcggctgggggtgccccttgtctct
tctgagttcctgctgactggagtgctgaggcaggaagccacaccagaagcgtttgtcctc
tccagtttggaaacactacccaccggaaaacacacggacacacacagagacacaacacac
acacagacataa

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