Nannospalax galili (Upper Galilee mountains blind mole rat): 103740641
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Entry
103740641 CDS
T03372
Symbol
Arid2
Name
(RefSeq) AT-rich interaction domain 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03082
ATP-dependent chromatin remodeling
ngi05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103740641 (Arid2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103740641 (Arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngi03000
]
103740641 (Arid2)
03021 Transcription machinery [BR:
ngi03021
]
103740641 (Arid2)
03036 Chromosome and associated proteins [BR:
ngi03036
]
103740641 (Arid2)
Transcription factors [BR:
ngi03000
]
Eukaryotic type
Helix-turn-helix
ARID
103740641 (Arid2)
Transcription machinery [BR:
ngi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103740641 (Arid2)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
103740641 (Arid2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
103740641
NCBI-ProteinID:
XP_008839537
LinkDB
All DBs
Position
Un
AA seq
1833 aa
AA seq
DB search
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
VDDNEVRDLISDRNKSQEDPSEEWIWESLFHPPRKLGINDVEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLLSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLVEHPSSSHQVLSE
IRPQAIEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSNNSGQAHIHVIGVK
RRAIPLPVQMYYQQQPLSTPVVRVDSVADVSPTPSPAGIPHGSQTVGNHFQRTPANNQSS
NLTATQMSFPVQGVHTVAQTVSRIPPSPSIHTHQQQNAPVTVIQNKAPIPCEVVKATVIQ
NSIPQTAVPVSIAVGGGPAQSSVVQNHNTGPQPVTVMNSQTLLHHPSVIPQPSSLHTVVP
GQIPSGTPVTVIQQTVSQSHLFGRVQNIPACTSTVSQGQQLITTSPQPMHTSSPQTATGS
QPQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQPSRVGFQNIAPKP
LPSQQVSSAVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTV
QLTGQPNITPSSSPSPAPATNNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPA
PPTQQVQVQVQQPQQVQMQVQPQQTNTGVGQPASNESSLIKQLLLPKRGPSTPGGKLILP
APQIPPPNNARAPSPQVVYQVANNQAAGFGVQGQTPAQQLLVGQQNVQLVQSTMAPTGGV
QTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNATQLIAPAG
ISVSGTQAGVGLQVQTLPATQTSPAGQSPCSTATPPFKGDKIICQKEEEAKEATGLHVHE
RKIEVMENPSCRRGSANTSNGDTNENEMQVGSLLNGRTYSDSSLPPSNSGKIQSEANQCS
LISNGPSLDLGENGASGKQNSEQTDMQESKSDLKKPLVNGICDFDKGNGSHLSKNIPNHK
TSNHVGNGEISPSEPQGTSDATQQDTAKGDQPERVSNGPMLTLGGSPSMSSMQETSNVAS
QQFSGTELPNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQIIAVPHSGSRVSHSALS
SDVWSPNGTAECKTVKRPAEDNDRETVTGIPNKVGVRIVTISDPNNAGCSATMVAVPAGA
DPSTVAKVAIESAVQQKQQHPPPYIQNVVPQNTPVPPSPAVQVQGQPNSPQPSPLSASSQ
QADPVRKPGQDFMCLWRSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRF
SFITHLQDKHCSKDALLAGLKQDEPGQVGNQKSSTKQPAVGGTSSAPRAQKAIASHPSAA
LMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVL
AISNMEASSTLAKCLYELNFTVQSKEQDSEMLQ
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcgacggggaaggcgcctccggacgagcggagaaagggactggctttcctg
gacgagctgcggcagttccaccacagccgagggtcgccgttcaagaagatccccgcggtg
ggtgggaaggagctggatctgcacgggctctacaccagagtcactactttgggcggcttc
gcgaaggtttctgagaagaatcagtggggagaaattgttgaagagttcaactttcccaga
agttgttctaacgctgcctttgctttaaaacagtattacttgcgttatctagaaaagtac
gagaaagttcatcattttggggaagatgatgatgaggtaccaccaggcaacccaaagcct
cagcttcctattggtgcaattccatcttcctacaattaccagcaacacagtgtgtcagat
tatctgcgtcaaagttatgggctatctatggattttaattcgccaaatgattataataaa
ttggtgctttcactgttgtctggactcccaaatgaagtggactttgctattaatgtatgc
actctcctgtcaaatgaaagcaagcacgtcatgcaacttgaaaaagaccctaaaatcatc
actttattacttgctaatgccggggtgtttgacgacactttaggatccttttctactgtg
tttggagaagaatggaaagagaagactgatagagattttgttaagttttggaaagacatt
gttgatgataatgaagtacgtgacctcatttctgacagaaacaagtctcaagaagatcca
tcagaagaatggatttgggaatctttatttcatccccctcggaagctgggtattaatgat
gttgaaggacagcgggtgctccagattgcagtgattttgcgaaatctttcctttgaggag
ggcaatgtgaagctcttggcagctaatcgtacctgtcttcgtttcctgttactttctgca
catagtcattttatttctttaaggcagttaggccttgacacattaggaaatattgcagct
gagctcttattggaccctgttgatttcaaaacgactcatctgatgtttcatactgttaca
aaatgcctactgtcaagggatagatttttaaagatgaggggcatggaaattttgggaaat
ctttgtaaagcagaagataatggtgttttaatttgtgaatatgtggatcaagattcatac
agagagataatttgtcatctcaccttacctgatgtgctgcttgtaatctcaacactcgag
gtgctatacatgctcactgaaatgggagatgttgcctgcacaaaaattgcaaaagtagaa
aagagcatagatatgttagtgtgtctggtttctatggatattcagatgtttggtcctgat
gccctagctgcagtaaaacttgttgaacatccaagctccagccatcaagttttatctgaa
attagaccacaagctatagagcaggtccagacccagacccatgtagcatctgccccagct
tccagagcagttgtagcacagcatgttgctccacctccaggaatagtggaaatagatagt
gagaagtttgcttgtcagtggctaaatgctcattttgaagtaaatccagattgttccgtc
tctcgagcagaaatgtattctgagtatctatcaacttgtagtaaattagctcgtggtggg
atcctcacatcaactgggttttataaatgtcttagaacagtctttccaaatcatacagta
aagagagtggaggattccaataacagtgggcaggcacatattcatgtaataggagtgaaa
cggagggcaataccacttcccgttcagatgtactatcagcagcaaccactgtctactcct
gttgttcgtgttgattctgttgctgatgtatctccaactccttcacctgcaggaatccct
catggatcacaaactgtaggaaatcactttcagaggactcctgctaacaatcaatcttca
aatttgactgcaacacaaatgtcttttccagtacaaggtgttcatactgtcgcacagact
gtttctagaattccaccaagtccttcaattcatacccaccagcagcaaaatgctccagtg
actgtcattcagaataaagctccaattccttgtgaagttgttaaggcaaccgtaatccag
aattcgataccccagacagcagttcctgttagtattgctgttggaggaggacctgcacag
agttctgtggttcaaaatcataatacagggccacagcctgttacagttatgaattctcag
acattgcttcaccatccatccgtaattccacagccatcttcattacacacagtagtacca
ggacagataccttcaggcactcctgttacagtaattcaacaaactgtatcacagagtcac
ttatttggaagagtacagaacataccagcgtgtacgtctacagtttcacagggtcaacag
ttaatcaccacatcaccacagcctatgcacacttcatctccacagacagcaactggtagc
cagccacaagacacagttataatagcacccccacaatatgtaacaacttctgcatccaat
attgtctcagcaacttcagtacagaattttcaggtagccacaggacaaatggttaccata
gctggtgttccaagtccacagccttcaagggtaggatttcagaacatcgcacccaagcct
ctcccttctcagcaagtctcatcagcagtggtacagcagcctattcagcaaccacagcag
ccaacccaacagagtgtagtgattgtaagccagccagctcagcaaggtcagacttatgca
ccagccattcaccaaattgttcttgctaatccggcagctcttccagctggtcagactgtt
cagttaactggacaaccaaacataactccatcttcttcaccatctcctgcccctgctact
aataaccaggttcctactgccatgtcgtcttcttccaccccccagtcacagggaccacct
cctaccgtcagtcagatgctatctgtgaaaaggcagcaacagcagcagcattcaccagca
cctccaacacagcaggtacaggtacaagttcagcagccacagcaagtacagatgcaagtg
cagcctcagcaaacaaacacaggcgttggtcagcctgcttccaatgagtctagtctgata
aaacagctactgcttccaaaacgtggcccttcaactccaggtggtaagcttatcctccca
gctccacagattcctccccctaataatgcaagagctccaagtcctcaggtggtctatcag
gtggccaacaaccaggcagctggttttggagtacagggacagaccccagctcagcagcta
ttggttggacagcaaaatgttcagttggtccaaagtacaatggcacccacagggggagtg
caaactgtgcccatttcgaacttacaaatattgccaggcccactgatctcaaacagccca
gcaaccattttccaagggacttctggcaaccaggtaaccataacagttgtgccaaataca
agttttgcaactgcaactgtgagtcagggaaatgctactcagctcattgctccagcagga
attagcgtgagcggaacgcaggcaggagttggacttcaggtgcaaacccttccagccact
cagacatctccagctggacaatcaccctgttccactgctacccccccgttcaaaggtgat
aaaataatttgccaaaaggaggaggaagcaaaggaagccactggtttgcatgttcatgaa
cgtaaaattgaagtcatggagaacccgtcctgccgacgaggaagtgcaaacaccagcaat
ggggatacaaatgaaaatgaaatgcaggtgggaagtcttttaaatgggagaacatatagt
gactccagtctacctccttcaaactcagggaaaattcagagtgaggctaatcagtgctca
ctaatcagtaatgggccatcattagatttaggtgagaatggagcatctggaaaacagaac
tcagaacaaacggacatgcaggagagcaaaagtgatttgaagaaacccctagttaatgga
atctgtgattttgataaaggaaatggttctcatttaagcaaaaacattccaaatcacaaa
acctctaatcatgtaggaaatggtgagatatctccatcagaaccacaagggacttcagat
gccactcagcaagatactgccaaaggtgatcaaccggaaagagtttccaatggacctatg
ttaactttgggtggttcaccgtccatgagcagtatgcaggagacttcaaatgtggcatca
cagcaatttagtggtaccgagttgcccaatggacctctagcttcaagtttgaattcagat
gtgcctcagcaacgcccaagtgtagttgtctcaccacattctacaacctctgttatacag
gggcatcaaatcatagcagttccccactcaggatccagagtgtcccattctgccctatca
tctgatgtttggtctccaaatggcacagcagaatgcaaaactgtaaagaggccagcagag
gataatgatagggaaacagtcacaggaattccaaataaagtaggagtaagaattgttaca
atcagtgaccccaacaacgctggttgcagtgcaacaatggttgctgtgccagcaggagca
gatccaagcactgtagctaaagtagcaatagaaagtgctgttcagcaaaagcagcagcat
ccaccaccatacatacagaacgtggtcccacagaacactcctgtgccaccttcaccagct
gtgcaagtacagggccagcctaacagtcctcagccctctccactcagtgcatccagtcag
caggcagatccagtgaggaagcctgggcaggacttcatgtgtctgtggcggtcttgtaaa
aagtggtttcagacaccctcccaagttttctaccatgcagctactgaacatggaggaaaa
gacgtctacccagggcagtgtctttgggaaggttgtgagccttttcagcgacagaggttt
tcttttattacccacttacaggataagcactgttcaaaggacgccctgcttgcagggtta
aaacaagatgaaccaggacaagtgggaaatcaaaaatcttctacgaagcagccagctgta
gggggcacaagctcagctcctagagcacaaaaggccattgcgagtcaccccagtgctgca
ctcatggctcttaggagaggatcaagaaaccttgtctttcgagattttacagatgaaaaa
gagggaccaataactaaacacatccgactaacagctgccttaatattaaaaaatattggt
aaatactcggaatgtggtcgcagattactaaagagacatgaaaacaacttatcagtgcta
gccattagtaacatggaagcttcctccacccttgccaaatgcctttatgaacttaatttt
acagttcagagtaaagaacaagactcagaaatgctgcagtga
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