Nannospalax galili (Upper Galilee mountains blind mole rat): 103740732
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Entry
103740732 CDS
T03372
Symbol
Ift57
Name
(RefSeq) intraflagellar transport 57
KO
K04638
intraflagellar transport protein 57
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi05016
Huntington disease
ngi05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
103740732 (Ift57)
05022 Pathways of neurodegeneration - multiple diseases
103740732 (Ift57)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ngi03037
]
103740732 (Ift57)
Cilium and associated proteins [BR:
ngi03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
103740732 (Ift57)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IFT57
Baculo_PEP_C
DUF1664
Mod_r
Fez1
Fib_alpha
Speriolin_C
Exonuc_VII_L
VASP_tetra
Motif
Other DBs
NCBI-GeneID:
103740732
NCBI-ProteinID:
XP_008839646
LinkDB
All DBs
Position
Un
AA seq
425 aa
AA seq
DB search
MAAAVSSRLEDGVSRARGEGAGEAVVERGPGAAYHVFVVMEDLVEKLKLLRYEEEILWKS
NLKPPSRHYFALPTNPGEQFYMFCTLAAWLINKTGRSFEQPQEYDDPNATISNILSELRS
FGRTADFPPSKLKSGYGEHICYVLDCLAEEALKYIGFTWKRPLYPVEELEEETVPEDDAE
LTLSKVDEEFVEDETDNEENFIDLNVLKAQTYRSDTNESAKQEDILESTTDAAEWSVEVE
RVLPQLKVTIRTDNKDWRSHVDQMHQHKSGIESALKETKAFLDKRHNEINRTLEKIGSRE
KYINNQLEHLVQEYRAARAQLSEARERYQERNSGVTERTRLLSEVTEELEKVKQEMEEKV
NSMTDGTPLVKIKQSLTKLKQEIVQMDIQIGVVEHTLLQSKLKEKSNMTRDMHATVTPES
AIGFY
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcggtatcgtcgcgcttggaggatggggtgtctcgggctcgcggcgaaggc
gcaggggaggcggtggtggagcgcgggcccggcgcggcctaccacgtgttcgtggtgatg
gaggacttggtggagaagctgaagctgctccgctatgaggaggagatcctctggaagagc
aacctgaagccgccttccagacactattttgctctgcctaccaaccctggtgaacagttc
tacatgttttgcactcttgctgcatggctgattaacaaaacaggacgatcctttgagcag
cctcaagaatatgatgatcctaatgcaacaatatctaatatattatcggagcttcggtca
tttgggcggactgcagattttcccccttcaaagttaaagtctggctatggagagcacata
tgctatgttcttgattgtttagctgaagaagcactaaagtatattggttttacttggaaa
agaccattatacccagtggaagaattagaagaagagactgttccagaagatgatgcagaa
ttaacattaagtaaagtagatgaagaatttgtggaagacgagacagataatgaggaaaac
tttattgatctcaacgttttaaaggctcagacctatcgctcggacacaaacgagtctgcc
aaacaagaagatattttggaatctacaacagatgctgcagaatggagtgtcgaagtcgaa
cgtgtactaccacaactgaaagtcacgattaggactgacaataaggattggagaagccat
gttgatcaaatgcaccagcacaaaagtggaattgagtcggctctaaaggagacaaaggct
tttttggacaagcgccataatgaaattaataggactctggaaaagattggcagccgagaa
aaatacatcaacaatcagcttgagcacttagttcaagaataccgtgcagcccgagcccaa
ctgagtgaggcaagggagcgctaccaagagaggaacagtggagtaacagaaaggaccaga
ctcctgtctgaggtaacagaagaattagaaaaggtaaagcaagaaatggaagaaaaggtc
aacagcatgactgatgggactcctttggtgaagataaaacagagcttaaccaaactgaag
caagagattgttcagatggacattcaaattggtgttgtggaacacacactactccagtca
aagctaaaggagaagtccaacatgactagagacatgcatgcaaccgtcactccagaatca
gcaataggcttttattaa
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