Nannospalax galili (Upper Galilee mountains blind mole rat): 103740992
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Entry
103740992 CDS
T03372
Symbol
Vldlr
Name
(RefSeq) very low density lipoprotein receptor
KO
K20053
very low-density lipoprotein receptor
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi05017
Spinocerebellar ataxia
ngi05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
103740992 (Vldlr)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
103740992 (Vldlr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngi04131
]
103740992 (Vldlr)
Membrane trafficking [BR:
ngi04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
103740992 (Vldlr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
103740992
NCBI-ProteinID:
XP_008839910
UniProt:
A0A8C6QI96
LinkDB
All DBs
Position
Un
AA seq
873 aa
AA seq
DB search
MGTSARWALWLLLALCWAPRDARASASGKKAKCESSQFQCTNGRCITLLWKCDGDEDCVD
GSDEKNCVKKTCAESDFVCNNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEMSC
GAHSTQCIPVSWRCDGENDCDNGEDEENCGNITCSADEFTCSNGRCISRNFVCNGQNDCN
DGSDEQDCAPPTCSAHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQCGRQPVIHTKCP
ASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGI
RDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCDQEQDCRDWSDEPLKECHINEC
LVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKCE
CSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAA
QKLFWADLSQKAIFSASIDDKVGRHFKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVA
TLDGTKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTTDIQ
WPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWI
DGENEAVYGANKFTGSELATLVNNLNDAQDIIIYHELVQPAGKNWCEEDMENGGCAYLCL
PAPQVNDHSPKYTCSCPNGYNLEENGRECQSTTTTVAYSETKDTSTTEILPTSGLVPGGI
NVTTAVSEVSVPPKGTSAAWAILPLLLLVMATVGGYLTWRNWQHKNMKSMNFDNPVYLKT
TEEDLSIDIGRHSASVGHTYPAISVVSTDDDLA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtccgcgcgctgggcgctgtggcttctgctcgcgctgtgctgggcgccccgg
gacgcccgcgcctctgcaagcgggaaaaaagccaaatgtgaatcctcccaattccagtgt
acaaatggccgctgcattactctgctgtggaaatgtgatggagatgaagactgtgttgat
ggcagtgatgaaaagaactgtgtaaagaagacgtgtgctgagtcagacttcgtgtgcaac
aatggccagtgtgttcccaacagatggcagtgtgatggggatcctgactgtgaagatggt
tctgatgagagcccagagcagtgccatatgagaacatgccgcataaatgaaatgagctgt
ggcgcccattctactcagtgtatcccagtgtcctggagatgtgatggtgaaaatgattgt
gacaatggagaagatgaagaaaactgtggcaacataacatgtagtgctgatgagttcact
tgctccaatggccgctgcatctctaggaactttgtgtgcaatggccagaatgactgtaat
gatggcagtgatgagcaggactgtgccccaccaacctgcagtgcccatgagttccagtgc
agcacatcctcctgcatccccatcagctgggtatgtgatgacgatgcagactgctctgac
cagtcagatgagtcccttgaacagtgtggccgccaaccagtgatacacaccaagtgccca
gccagcgagatccagtgtggttctggggaatgcattcataaaaagtggcgatgtgatggg
gaccctgactgcaaggacggtagcgatgaggtcaactgcccttctagaacctgcagacct
gaccagtttgaatgtgaggatggcagctgcatccatggcagcagacagtgcaatggcatc
cgagactgtgttgacggctccgacgaagtcaactgcaaaaacgtcaatcagtgcttgggc
cccggaaagttcaagtgcagaagtggggaatgcatagatatcagcaaagtgtgtgaccag
gagcaggactgcagagactggagtgatgagcccctgaaagaatgccatatcaatgaatgc
ttggtaaacaacggtggctgttcccacatctgcaaagacctagttataggctatgaatgt
gactgtgcagctgggtttgaactgatagataggaaaacctgtggagatattgatgaatgc
caaaacccaggaatctgcagtcaaatttgtatcaacttaaaaggcggttacaagtgtgaa
tgtagtcgtggctatcaaatggatcttgccactggcgtgtgcaaggcagtaggcaaagag
ccaagtctgatcttcactaatcgaagagacatcaggaagattggcctagagaggaaagaa
tatatccaacttgttgaacaactaagaaacacggtggctcttgatgctgacattgcagct
cagaagctattttgggctgatctaagccaaaaggccatcttcagtgcctcaattgatgac
aaggttggtagacattttaaaatgatcgacaatgtctataatcctgcagccattgctgtt
gattgggtgtacaagaccatctactggactgatgcggcttctaagactatttcagtagct
accctagatggaaccaagaggaagttcctgtttaattctgacttgcgagagcctgcctcc
atagccgtggacccgttgtctggcttcgtttactggtcagattggggtgaaccagctaaa
atagaaaaagcagggatgaatggatttgatagacgtccactggtgaccacggacatccag
tggcctaatggaatcacccttgaccttatcaaaagccgcctctactggctggattccaag
ctgcacatgctgtctagtgtggacttaaatggccaagatcgtaggatagtgctaaagtct
ctggagttcctggctcatcctcttgcactcacaatatttgaggatcgtgtctactggata
gatggggaaaatgaagcagtgtatggtgcgaataagttcactgggtcagagctggctact
ctagtcaacaacctcaatgatgcccaagacatcattatctaccatgaactcgttcagcca
gcaggtaaaaattggtgtgaagaagatatggagaatggaggatgtgcatacctctgcctg
ccagcaccacaggttaatgatcactctccaaaatacacctgttcctgtcccaatggatac
aatctagaggaaaatgggcgagagtgtcaaagtactacaactactgtggcttacagtgag
acaaaagataccagcacaacagaaattctaccaactagtggactggttcctggagggatc
aatgtgaccacagcagtgtcagaggtcagtgttcccccaaaagggacttcagctgcctgg
gcaatccttcctctcttgctattagtgatggcaacagtaggtggatacttgacgtggagg
aattggcagcacaagaacatgaaaagcatgaattttgacaatcctgtgtacttgaagacc
actgaagaggacctctcaatagacattggtagacacagtgcctctgtcggacacacatat
ccagcaatatcagttgtaagcacagatgatgatctagcttga
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