Nannospalax galili (Upper Galilee mountains blind mole rat): 103741081
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Entry
103741081 CDS
T03372
Symbol
Smc3
Name
(RefSeq) structural maintenance of chromosomes 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04110
Cell cycle
ngi04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
103741081 (Smc3)
04114 Oocyte meiosis
103741081 (Smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngi03036
]
103741081 (Smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ngi00535
]
103741081 (Smc3)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
103741081 (Smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
103741081 (Smc3)
Proteoglycans [BR:
ngi00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
103741081 (Smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
COG3_N
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
103741081
NCBI-ProteinID:
XP_017655762
LinkDB
All DBs
Position
Un
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLDHFRRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMEYMHH
SAKANTDFNXLLFFKVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtgattatccagggctttcgaagttaccgagatcaaacaattgta
gaccccttcagttcaaagcataatgttattgtgggcagaaatggatctggaaaaagtaac
tttttttatgcaattcagtttgttctcagtgatgaatttagtcatcttcgcccagagcag
cgattggctttgttgcatgagggtacaggtcctcgtgttatttctgcttttgtggaaatc
atttttgacaattcagacaaccggttaccaattgataaagaggaagtttcacttcgaaga
gttattggtgccaaaaaagatcagtatttcctagataagaagatggtcacgaaaaatgat
gtgatgaacctccttgaaagtgctgggttttcacgaagcaatccttattatattgttaag
caaggaaagatcaatcagatggcaacagcaccggattctcagagattaaagctgttgaga
gaagtagctggtactagagtgtatgatgaacggaaagaagagagcatctccttaatgaag
gaaacagagggcaaacgtgaaaaaatcaatgagttgttaaaatacattgaagagagatta
catactttagaggaagaaaaggaagaactagctcagtatcagaagtgggataaaatgaga
cgagccctggaatataccatttataatcaggagcttaatgagactcgtgctaaacttgat
gagctctctgctaagcgagaaacaagtggagaaaaatccagacaattgagagatgcccag
caggatgcaagagataaaatggaggatattgaacgccaggttagagaattgaaaacaaaa
atttcagctatgaaagaagaaaaagaacagctcagtgctgaaagacaagagcagattaag
caaaggactaagttggagcttaaagccaaggatttacaagatgagttggcaggcaatagt
gaacagcggaaacgtttattaaaagagaggcagaagctgcttgaaaaaatagaagaaaag
cagaaagaactggcagaaacagaaccaaaattcaacagtgtaaaagaaaaagaagagcga
ggaattgctagattggctcaagctacccaggaaagaacggatctttatgcaaagcagggt
cgaggaagccagttcacatcaaaagaagaaagggataagtggattaaaaaggaactgaag
tctttagatcaggctattaatgacaagaaaagacaaattgctgctatacataaggatttg
gaggatactgaggcaaataaagagaaaaatttggagcaatataataaactggatcaggat
ctcaatgaagtcaaagctcgagtagaagaactggacagaaaatactatgaagtcaaaaat
aagaaagatgagttacaaagtgaaagaaattatttgtggagagaggagaatgcagagcag
caggcccttgctgctaaaagagaagatcttgaaaagaagcagcaacttcttagagcggca
acaggaaaggccattttaaatggaatagacagcataaacaaagtgctagaccattttcgt
cgaaaaggaataaaccagcatgttcaaaatggctatcatggcattgtgatgaataacttt
gaatgtgaaccagctttctacacttgtgtagaagtcactgctggaaacaggttattctat
cacattgttgattcagacgaagtcagcacaaagattttaatggagtttaataaaatgaat
cttcctggagaggtcacttttctgcctcttaacaagttagatgtcagggatactgcctat
cctgaaactaacgatgctattcctatgatcagtaaactgaggtacaaccccagatttgac
aaggctttcaaacatgtatttggaaagacacttatctgtcgtagcatggaagtttcgacc
cagctggcccgtgctttcactatggactgcattactttggaaggtgaccaagtcagtcat
cgaggtgctctaactggaggttattatgatacaagaaagtctcgacttgaattacagaaa
gatgttagaaaagcagaagaggagctaggtgaacttgaagcaaaactcaatgaaaacctc
cgcagaaatattgaaaggattaataatgaaattgatcagttgatgaaccaaatgcagcag
atagagacccaacaaaggaaatttaaagcatctagagatagcatattgtcagaaatgaag
atgctaaaagagaagagacagcagtcagagaaaaccttcatgcctaagcaacgtagctta
caaagtttggaggcaagtctacatgctatggagtctaccagagagtcattaaaagcagaa
ctaggaactgatttgctttctcaacttagtctggaagatcagaaaagagtagatgcactg
aatgatgaaattcgtcagcttcagcaggaaaacagacagttgctaaatgaaagaattaaa
ttagaaggcattattactcgagtggaaacatacttaaacgagaatctaagaaaacgcttg
gatcaagtggaacaggaacttaatgaactgagagagacagaaggtggtactgttcttact
gccacaacatcagaacttgaagccattaataaaagagtaaaagatactatggcaagatca
gaagatttggataattccattgacaaaacagaagctggaattaaagagcttcagaaaagt
atggaacgctggaaaaatatggagaaagaacatatggatgctataaatcacgatactaaa
gaactggaaaagatgaccaaccgacaaggcatgctgttgaagaagaaagaagaatgcatg
aagaaaatccgagagcttggatcccttccccaggaagcatttgaaaaataccagacactg
agcctcaagcagttgtttagaaaacttgaacagtgcaacacagagttgaagaagtacagc
catgttaacaaaaaagctttagatcagtttgtaaacttttctgagcagaaagaaaagttg
ataaaacgacaagaagaattggatagagggtacaaatcaatcatggaatatatgcaccat
tctgccaaggcaaatacagatttcaattgacttcttttctttaaggtatcgaagaacttc
agtgaagtattccagaagttagtacctggaggcaaagcaacattggtgatgaagaaaggc
gatgtagagggcagtcagtctcaggatgaaggagaagggagtggtgaaagtgagaggggt
tctgggtcacagagcagcgtcccatcagttgaccagttcacaggagttggaattcgggtc
tcgtttacaggaaagcaaggggagatgagagaaatgcagcagctttcaggtggacagaag
tctttggtagcccttgctctgatttttgccattcagaaatgtgacccagctcctttttac
ttgtttgatgagattgaccaagctttggatgctcagcacagaaaggctgtgtcagatatg
attatggaacttgctgtacatgctcagtttattactactacttttaggcctgaactgctt
gaatcagctgataaattctatggtgtaaagttcagaaataaggttagtcatattgatgtg
atcacagcagagatggccaaagattttgtagaagacgatactacacatggctaa
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