Nannospalax galili (Upper Galilee mountains blind mole rat): 103741208
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Entry
103741208 CDS
T03372
Symbol
Snapc4
Name
(RefSeq) small nuclear RNA activating complex polypeptide 4
KO
K09453
snRNA-activating protein complex subunit 4
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngi03000
]
103741208 (Snapc4)
03021 Transcription machinery [BR:
ngi03021
]
103741208 (Snapc4)
Transcription factors [BR:
ngi03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
103741208 (Snapc4)
Transcription machinery [BR:
ngi03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
103741208 (Snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
SLIDE
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
103741208
NCBI-ProteinID:
XP_008840172
LinkDB
All DBs
Position
Un
AA seq
1367 aa
AA seq
DB search
MDIDAEREKITQEIQELERILYPGSSGVHLEVSESSLGSDSEADSLPHEDLETADVPVLE
GRWGEASNDEEDPKDRALPEDPETCLQLNMVYQEVILEKLAEISQLLAENQEQQEELLFD
LAGAKCPKVKDGKSLPSNMYIGHFMKPYFKDKVTGVGPPANEDTREKAAQGIKAFEELLV
TKWKHWEKALLRKSVVSDRLQRLLQPKLLKLEYLQQKQSRVSSESERQALERQVREAEKE
IQDINCLPEEALLGNRLDSHDWEKIANVSFEGGRSAEEIRKFWQSSEHPSINKQEWGAEE
VEQLRAIAAAHGHLEWHLVAEELGTRRSAFQCLQKFQQYNKALRRREWTEDEDRVLTQLV
QEMRVGSHIPYRKIVYFMEGRDSMQLIYRWTKSLDPSLKKGFWTPEEDAKLLQAVAKYGA
QDWFKIREEVPGRSDAQCRDRYIRRLHFSLKKGRWNAKEEEQLIELIEKYGVGHWARIAS
ELPHRSGSQCLSKWKILVRKKRCLPRRRGRRPRPSSQWSSSSSSSNSGSDGYSSSSSSSE
DSEAEPLEGGRVLLPPQYTVPHIDLWVPTRQSTSLPQRQGAGCYPEHPAASSCPPDGSDT
THSHQKAVSTTASALDAVIQAQVPYETHSTVPRGAQDLHLSDTHPASVEDPSCKHVLKVP
LETVLKVLRSRPATQSHTLVKERLRKPPLPNLPPGPGPGDSTIEPCLQRLWRGTFQNRQR
RKRQALHRRLLKHRLLLAVIPWVGDITLPCTQAPRRLAAAQTQADIIRMQLECAHLASTP
VFTLFIQLLQIDTAGCMEVVRERKTQPPTAHQPGTQGPQPHLQQVAPSSADSTTGSLFPS
MPAEHTVKRAGHKGRPRLGSCRTESTSSPVPTLAPQGPRPKPKTVSELLFEKRLRESRAR
KATQALNSQLLVSSTLLLQAPLLPAPQGLPVAGPAASNMELSGPLAPVVISSSPSGSWQV
AETSAKDKQPLNLQTLPLTPLHRGTQAAAPAAFRSLAPAPEQAPVTCPLSTLGQSQAPAT
SQKQSLPKALPLFPAAPGPTRLPVQPLSLQPALGTQAGGHPLAAGARLPISWVLTTQKLL
PMPVATVVNFPQPVKTPDPAEPPVRQPPPPTELPARQPPPPTELPARQPLPPTKTPVCPG
HPPFSTEPRGPQDLERPLTSEPEKKALDLNLISQESEAAIRAWLRGCQGASVPPLGTKLP
YLPPALCSLRALSNLLLHKKALEHKVSSLVDGKAAGALQASLGLVRRQLHDNPAYLLLKT
RFLAVFSLPALLATLPPNSVPTTLSSATAVSSESDSEDLMGDLEPKDKARKLECMACGMQ
ASPVATDPMQETPGPGEDSTPSHPDASDDLDVLQTRHARHARKRRRL
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atggacatagatgctgagagagagaagataacacaggagatccaggagctagaaaggatt
ttataccctggttcctctggtgtccacttggaggtctctgaatccagtctcggttcagac
tctgaagcagattcgctgccccatgaggacttggaaactgctgatgttcccgtcttggaa
ggaagatggggcgaggccagcaatgatgaggaggaccccaaggacagagccctcccggaa
gaccctgagacctgtctgcagctgaacatggtctatcaggaggtcatcctggagaaactg
gcagagatcagccagctgctagccgagaaccaggagcagcaggaggagctcctgtttgat
ctggctggagccaaatgccccaaggtgaaggatggtaaaagcctgccctcaaacatgtac
atcggccacttcatgaagccatatttcaaggacaaggtcactggagtggggccccctgcc
aatgaagatacacgagaaaaggctgcccagggaatcaaggcctttgaagagctcctggtg
accaagtggaaacactgggagaaagcgttgctcaggaagtctgtggtgagcgaccgtcta
cagcgtctgcttcagcccaagttgctgaaacttgagtacttacagcagaaacagagccga
gtctccagtgagtcagagaggcaggccctggagaggcaggtcagggaagccgagaaggag
atccaagacatcaactgtctcccagaggaagctttgctggggaacaggctggacagccat
gactgggagaaaattgccaacgtcagttttgaaggaggccgtagtgcagaagagatccgg
aagttctggcagagttctgagcacccgagcatcaacaagcaggaatggggtgcagaggag
gtggagcagctgagagccattgccgccgcacacggccacctggagtggcacctggtcgca
gaggagctagggacccgtcgcagtgccttccagtgcctgcagaagttccagcagtacaac
aaggccctgagacgcagagagtggacagaggatgaggaccgggtgctaacccagctggtc
caggagatgcgtgttggcagtcacattccgtaccgcaagattgtctacttcatggaaggg
agagactccatgcagctgatctaccggtggaccaagagcttggaccccagcctgaaaaag
gggttttggaccccagaagaagatgctaagttgcttcaggctgtcgccaagtatggggca
caggactggtttaaaatccgggaagaggtgccaggtaggagcgatgcccagtgcagagac
cgctacatcagaagattacatttcagcttgaagaagggaagatggaatgcaaaagaggag
gagcagctgattgaattaatagaaaaatatggcgttggtcattgggccagaatcgcctct
gaacttccccaccgatcaggctcccagtgtctgagcaagtggaaaatcttggtcaggaag
aagcgctgtctcccgaggaggaggggacggaggccccgacctagcagtcagtggagctcc
agcagcagcagcagtaacagcggaagtgatggctacagcagcagcagcagcagcagcgag
gactcggaggcagagcctctggagggtggcagagtgctgctgcccccacagtacacagtg
ccacacattgacctgtgggttcctacaaggcagagcaccagcttaccacagagacaaggg
gcagggtgctacccagaacaccctgctgcttcctcctgccctcctgatgggtctgatacc
acccacagtcaccaaaaggcagtttccaccaccgcctcagctcttgatgcggtgatccag
gcacaagtgccctatgaaactcacagcactgtcccaagaggtgcccaggacctacacttg
tcagacactcacccagcaagtgtagaggatccatcctgcaagcatgtactgaaggtgccc
ttagagacagtgctgaaggtgctcaggagccgcccagccacccagagccataccctggtg
aaggagagactgaggaagccacccctgcctaacttacctccagggcctggccctggtgac
agcacgattgagccctgtctacagcggctgtggcgtggaaccttccagaataggcagcgg
cgcaagagacaggccctgcaccggaggcttctcaagcacaggcttctgctggctgtgata
ccctgggtgggggacatcaccctaccctgcacacaagctccgcggagactggcagcagcg
cagactcaagcggacatcatcaggatgcagttagagtgtgcccacctggccagcactcca
gtgttcacactgttcattcagctgttgcagattgacactgctggctgcatggaggtggtt
cgagagaggaagacccagccacccactgcacaccagcctggcacccagggcccccagcca
catcttcagcaggtagcgccatctagtgctgacagcaccacaggctccctcttcccaagc
atgccagctgaacacactgtaaagagagccggccataaagggcgtccacggctagggtcc
tgcagaactgagtctacctcctctccggtgcccacactagccccacagggccctcggccc
aagcccaagactgtatctgaactgctttttgagaagcggctccgcgagtcccgtgccagg
aaggccacccaggccctcaacagccagctgctggtctcctcaactctgctcctccaggcc
cctctgctgccagccccacagggtctcccagtcgcaggtcctgctgcctccaatatggaa
ctctctgggcctctggcccctgtggtaatcagctcaagcccttctggttcctggcaggta
gctgagacttcagccaaggacaagcagcccctcaacctgcaaaccctgcccctaactcct
ctccatagaggaacccaggctgcagcccctgctgctttcaggagcctggccccagccccc
gagcaggcccccgtgacttgtcctctgagcactctggggcaatctcaggcccctgccaca
tcccagaaacagagcctgcccaaagcccttccccttttccctgcagcccccggccccact
cggctgcctgtgcagcccctcagcctgcagcctgctctaggaacacaagcaggtgggcac
cccctggcagccggggccaggctacccattagctgggtgctcacaactcagaagctactc
cccatgccagtggcaactgtggttaacttcccccagccagtgaagacccctgatcccgca
gaaccgccagtaagacagccaccgccccccactgaactgccagcgagacagccaccgccc
cccactgaactgccagcgagacagccactgccccctactaagactcctgtgtgccctgga
caccctcctttcagtacagagcccagaggacctcaggatttggaaaggccactcacatcc
gagcctgaaaagaaggccctggacctcaacctgatttcccaggaaagcgaggcagctata
agggcttggctgaggggctgccaaggtgctagtgtgcctccactagggaccaaactccct
tacctgccccctgccctgtgtagcttgcgagcactgtccaacctcctgctccacaagaag
gccttggagcacaaggtgtcctctctagtggatgggaaggcggctggagccctacaggcc
tcactggggctggtgcggaggcagctccatgacaatccggcctacctcctgctgaagaca
cggttcttggcagtcttctcccttcctgcactcctggctactctgccccccaacagtgtc
cccaccaccctgtcatcagccacagcagtgagttctgagagtgacagtgaggaccttatg
ggtgacctggagcccaaggacaaggccaggaagctggaatgcatggcctgtggaatgcaa
gcaagcccagtggccacagaccccatgcaggaaaccccaggccctggtgaggattctacc
ccctcccacccagatgcttctgacgaccttgatgtgctccagacccggcatgcccggcat
gcccggaaacggaggcggctgtga
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