Nannospalax galili (Upper Galilee mountains blind mole rat): 103741648
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Entry
103741648 CDS
T03372
Symbol
Hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04613
Neutrophil extracellular trap formation
ngi05014
Amyotrophic lateral sclerosis
ngi05034
Alcoholism
ngi05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
103741648 (Hdac6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
103741648 (Hdac6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103741648 (Hdac6)
09165 Substance dependence
05034 Alcoholism
103741648 (Hdac6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ngi01009
]
103741648 (Hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103741648 (Hdac6)
04131 Membrane trafficking [BR:
ngi04131
]
103741648 (Hdac6)
03036 Chromosome and associated proteins [BR:
ngi03036
]
103741648 (Hdac6)
Enzymes [BR:
ngi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
103741648 (Hdac6)
Protein phosphatases and associated proteins [BR:
ngi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103741648 (Hdac6)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
103741648 (Hdac6)
Membrane trafficking [BR:
ngi04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
103741648 (Hdac6)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
103741648 (Hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
103741648
NCBI-ProteinID:
XP_008840774
UniProt:
A0A8C6R007
LinkDB
All DBs
Position
Un
AA seq
1151 aa
AA seq
DB search
MTSTGQDSSTRQRRSRHNPQSPPQDSSTTSKRSVKKGAVPRSSPSLAEVKKKGKMKKLSQ
AVEEDLIEGLQGLDLNPESRVLVGTGLVFDEQLNEFHCLWDDSFPEGPERLLAIKEQLIL
EGLLERCVSFQARFAEKEELMLVHSLEYIDLMQTTQYMNEGELRILADTYDSVYLHPNSY
SCACLATGSVLRLVDAVLGAEIRNGMAVVRPPGHHAQHSLMDGYCMFNHVAVAARYAQKK
HHIQRVLIVDWDVHHGQGTQFIFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQ
GYTINVPWNQVGMRDADYIAAFLHILLPVAFEFQPQLILVAAGFDALLGDPKGEMAATPA
GFAQLTHLLMGLAGGKLILSLEGGYNLHALAKGVSASLHTLLGDPCPMLDSPGAPCRSAQ
TSLSYTLEALEPFWETLVRSVESPEEDNDDVEENKVEENEEERPWEAAALPMDTWPVLQY
RTGLVYDERMMSHCNLWDNHHPETPQRILRIMCHLEELGLASRCLILPVRPAMDAELLTC
HSADYVERLQATEKMKTRELHREGANFDSIYICPSTFACAQLAAGATCCLVEAVLSGEVL
NGVAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQAIAGRPLRILIVDWDVHHGNGTQHM
FEDDPSVLYMSLHRYDRGTFFPMGDEGSSSQVGHAAGTGFTVNVPWNGPRMGDADYLAAW
HRLVLPIAYEFNPELVLVSAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLANGHIILILE
GGYNLASISESMAACTHSLLGDPPPLLALLRPPQPRALASITETIQVHRRYWRSLRIMKM
EDKEEHSSSNIVTKKSPKTANPVLAKGTSMPKGNMPERSMRKATSALCSKESSLGKTKSK
TAKVVLTQGQPSERTSRGVTLYHTTSKETEGGVTTGHFASEAATGEGMLNQTTSQEAMGE
AELIQSPPASNADKQTPEVPPVQETTAQLVGSLSTLDLSDGAQEVPESEEALVGEATGGQ
DMNNLMLTRGFGDLDARDIFYAVTPLSWCPHLVAVCPVPAEGLDVTQPCKTCGTLQENWV
CLTCYQVYCSRYINAHMVHHHEASEHPLVLSCVDLSTWCYVCQAYVHHQDLQDMKNMAYR
NKFGEDMPCSY
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggccaggattcctccaccaggcagcgaaggagtaggcacaatccccaa
tcgcctcctcaggactccagcaccacctcgaagcgaagtgttaagaagggtgcagtaccc
cgctctagccccagtctagcagaggtaaagaagaaaggcaaaatgaagaagctcagccaa
gcagtggaagaagacctaatcgaagggcttcaaggactggatctgaaccccgagtcaagg
gtactggttggcactggattggtgtttgatgaacagctaaatgaattccactgcctctgg
gatgacagcttccctgaaggccctgagcggctccttgccatcaaggaacaactgattctg
gaaggcctcctggaacgttgtgtgtcctttcaggcccggtttgctgagaaggaagagctg
atgttggttcacagcctggaatacattgatctgatgcagacaacccagtacatgaatgaa
ggagaacttcgtatactagcagacacctatgattcagtttatctgcatccgaactcatat
tcctgcgcctgcctggccacaggctctgtcctcaggctggtagatgcagtcctaggggct
gagattcggaatggcatggctgttgtcaggcctcctggacaccatgcccagcacagtcta
atggatgggtattgcatgttcaaccacgtggctgtggctgcccgctatgctcaaaagaag
caccacattcagagggttcttatcgtggactgggatgtacaccatggtcaaggaacacag
tttatcttcgaccaggaccccagtgtcctctacttctccatccaccgctatgagcaaggt
cggttctggccccaccttaaggcttctaactggtctaccacaggttttggccaaggccaa
ggatataccatcaatgtgccttggaaccaggtgggaatgagggatgctgactacattgct
gctttcctgcacatcctgctgccagttgcctttgagttccagcctcaactgatcctggtg
gctgctggatttgatgccctcctaggggatcccaagggagagatggctgccactccagca
ggatttgcccagctaacgcacctgcttatgggtctggcaggaggcaagttgattctgtct
ctggagggtggctacaacctacatgccttggctaagggtgtcagtgcatcactccacacc
cttcttggagacccttgccccatgctggattcccctggtgcaccttgtagaagtgcccaa
acttcactctcctatactctggaagcccttgagcccttctgggagacacttgtgcgatca
gttgagtccccagaggaagataatgacgatgtggaagaaaacaaggtggaagagaacgaa
gaggaaagaccctgggaggctgctgcactaccaatggatacatggccagtactgcagtat
cgcactggactagtctatgatgaaagaatgatgagtcactgcaacctgtgggacaaccac
caccctgagacacctcagcgcatcttacggatcatgtgccacctggaggagctgggcctt
gcctcacgatgcctcatcctgccagtgcggcctgccatggatgctgagctgctcacttgc
cacagtgctgactacgtggagcgtctccaggccacagaaaagatgaaaacccgggagctg
caccgtgaaggtgctaactttgactccatctacatctgccccagcacctttgcctgtgcg
caacttgctgcaggagccacctgctgcctggtggaagctgtgctctcaggagaggttttg
aatggagttgctgtggtacgtcccccaggacaccatgcagagcaggatgctgcttgtggt
ttctgctttttcaactctgtggctgtggctgctcgccatgcacaagccattgctgggcgt
cccctgcggatactgatcgtggattgggacgttcatcatggtaatggaacccagcacatg
tttgaggatgaccccagtgtattatacatgtccctgcaccgatatgatcgtggcaccttc
ttccccatgggagatgagggttctagcagccaagtaggccatgctgcaggcacgggcttc
actgtaaatgtgccctggaatgggccccgcatgggtgacgctgattacctggctgcctgg
catcgtctggtacttcccattgcctatgagtttaatccagaactggtgctggtttcagct
ggctttgatgcagcacaaggagacccactgggtggctgccaggtgacaccggagggctat
gcccaccttacccatctgctgatgggccttgccaatggccacattatccttattttagag
ggaggatacaacttggcatccatctctgagtccatggctgcctgtacccactccctcctt
ggagacccaccacccctgcttgccttgctgcggcctccacaaccaagagccctggcctca
atcactgagaccatccaagtccatcgcagatactggcgcagtttgaggatcatgaagatg
gaagacaaggaggagcactccagttctaatattgtcaccaagaagtcacccaaaaccgct
aatcctgtgttggctaagggaacgagcatgccaaaaggaaacatgccagaaagaagcatg
aggaaggctacgtcggcattatgttcaaaagaatcctctctgggcaagactaaatcaaag
acagctaaggtggtgctcactcagggccaaccctcagagagaaccagtaggggagttaca
ctgtaccacactacctcaaaggagactgagggaggtgtcacaacgggccattttgcctca
gaggcagccacaggagaaggcatgcttaatcagaccacttcacaggaggctatgggagaa
gctgagttgatccaaagtcctccagcctcaaatgcagacaagcagaccccagaagttcca
cctgtacaggaaaccacagcccagctggttgggagtctcagcactttggatctaagcgat
ggagctcaggaggttccagaatctgaggaggccctagtaggagaggcaactggaggtcag
gacatgaacaacttgatgctgacacgaggatttggggaccttgatgcccgggatatattt
tatgctgtgaccccactatcctggtgtccccatttggtggcagtgtgccctgtacctgca
gaaggcctggatgtcactcaaccttgtaagacttgtggaacactccaggaaaactgggtg
tgtctgacttgttatcaggtgtactgcagccgttatatcaatgcccatatggttcaccac
catgaagcctctgaacacccactggtcctcagctgtgttgacctgtctacctggtgttac
gtctgtcaggcttatgtacaccaccaggatctccaagatatgaagaacatggcctatcgg
aacaagtttggggaggacatgccctgttcatactaa
DBGET
integrated database retrieval system
