Nannospalax galili (Upper Galilee mountains blind mole rat): 103741782
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Entry
103741782 CDS
T03372
Symbol
Rnf43
Name
(RefSeq) ring finger protein 43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
103741782 (Rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngi04121
]
103741782 (Rnf43)
Enzymes [BR:
ngi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103741782 (Rnf43)
Ubiquitin system [BR:
ngi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103741782 (Rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3H2C3
zf_RING_Vps8
zf-RING_Vps41
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
103741782
NCBI-ProteinID:
XP_008840914
LinkDB
All DBs
Position
Un
AA seq
784 aa
AA seq
DB search
MSGGHQLQLAALWPWLLMATLHAGFGRTGLVLAAAVESERSAEQKAIIKVIPLKMDPTGK
LNLTLEGVFAGVAEVTPAEGKLMQSHPLYLCNASDDDNLEPGFISIVKLESPRRAPRPCL
SLASKARMAGERGASAVLFDITEDRAAAEQLQQPLGLTWPVVLIWGNDAEKLMEFVYKNQ
KAHVRIELKEPPAWPDYDVWILLTVVGTIFVIILASVLRIRCRPHHSTPDPLQQRTAWAI
SQLATRRYQASYRQTRAEWQDSGSSCSSAPMCAICLEEFSEGQELRVISCLHEFHRTCVD
PWLYQHRTCPLCMFNIVEGDSFSQALASSPSYHEPGRRLHLIRQHPGHAHYHLPSAYLLG
PSRNSVARPPRPRPFLPSQGPNMGSRHQRLSRAAHVRASGEQQHLTVAQHPYAQGWGLGR
LRCTSQHPTACPVSLRRARPHDSSGSGESYCTERSGYLADGPASDSSSGPCHGSSSDSVV
NCTDISLQGIHGSSSTFRSSLSSDFDPLVYCSPEGDLPGKGLQPSVTSRPRSLDSVVPTG
ETRVSSHVHYHRHRHHHYKKRFQWHGRKPGLETGVNQSKSAVSRTQLQPEPSFPDQQFTR
PNPTAPSMLPNPQRPRALTEPVPGPAEAASPSPGPSPSSLLNLQKSNLPVRHPQRKRRGG
PSEPTPTSRPQDLTLHPACQVFPHYSPSLAYPWPPETHPLIFRPPGLDRRLLPEAPGPCY
SSSQPVWLYLTPHRPLGPHPPGEGHSEWSSDTPEGRPCPYPHCQVLSAQPGSEEELEELC
EQAV
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggccaccagctgcagttggctgccctctggccctggctgctgatggctacc
ctgcatgcaggctttggacgcacaggactggtattggcagcagcggtggagtctgaaaga
tcagcagaacagaaagctattatcaaagtgatccccttgaaaatggaccccacaggaaaa
ctaaatctcactttggaaggtgtgtttgctggtgttgcagaagtaactccagcagaagga
aaattaatgcagtcccatcccctgtacctgtgcaacgccagtgatgatgacaatttggag
cctggatttatcagcatcgtcaagctggagagtcctcgacgggctcctcgcccctgcctg
tcgctggccagtaaggcccgcatggctggtgagcgaggagccagtgcggtgctctttgac
atcactgaggatcgagctgctgctgagcagctgcagcagcccctggggctgacttggcca
gtggtgctgatctggggtaatgatgctgagaagctgatggagttcgtgtacaagaaccag
aaggcccatgtgaggattgagctgaaggagcccccagcctggccagattacgatgtgtgg
atcctcttgactgtggtgggcaccatctttgtgatcatcctggcttcagtgctgcgcatc
cggtgccgcccccaccacagcacgccggaccctcttcagcagagaacagcctgggccatc
agccaactggccaccaggagatatcaagccagctataggcagactcgggctgagtggcag
gactcaggcagtagctgcagctcagctcctatgtgtgctatctgcttggaggaattctct
gaggggcaggagctacgggttatttcctgcctccatgagttccatcgtacctgtgtggac
ccctggctatatcaacatcggacttgtcccctctgcatgttcaacatcgtagagggagat
tcattttcccaggccctggcatcctctccatcttaccatgaaccaggcaggagactgcac
ctcattcgtcaacatcctggccatgcccactatcatctcccttctgcctacctgttgggc
ccttccagaaattcagtggctcggcctccaaggcctagacccttcctgccatctcaaggg
ccaaatatgggatctcggcaccagcgcctctccagagctgcacatgtgcgggcatcaggc
gagcaacagcacctgacagtggcccagcacccctatgcacagggctggggactgggccgc
ctccgatgtacctctcagcatcccacagcttgcccagtgtccctgcgccgggccaggcct
catgacagcagcggatctggagaaagctactgtacagaacgcagtggctacctggcagat
gggccagccagtgactccagctcagggccctgtcatggctcctccagtgactcagtggtc
aattgcacggacatcagtttgcagggcatccatggcagcagttctaccttccgcagctcc
ctgagcagtgactttgaccccctggtgtactgcagtcctgagggggatctcccgggaaag
gggttgcagcctagtgtgacctctcgaccccgttccctagactcagtagtgcccacaggg
gaaacccgggtttccagccacgtccactatcaccgccaccggcaccatcactacaaaaag
cggttccagtggcatggcaggaagcctggcctagaaacgggggtcaaccagtccaaatct
gctgtttctcggactcagctccagccagagccatctttccctgaccaacagttcaccaga
cccaacccaacagctccttcaatgctccccaacccacaacggcccagggcccttacagag
ccagtccctggaccagcggaagctgccagccccagccccggtcccagccccagcagtctt
ctgaacttgcagaaatccaacctccctgtccgacacccacagagaaaacggcggggtggt
ccttcagaacccacgccaacctctcggccccaggacttgactctgcacccagcttgccag
gttttcccccattatagccccagcctggcatacccttggcccccagagactcacccattg
atcttcagacctccaggcctggataggaggctgctacccgaagccccaggcccctgttac
tcaagttcacagccagtgtggttgtatctgactcctcaccggcctctgggaccacaccca
cctggagagggacattctgaatggagttctgacaccccagagggcaggccatgcccttac
ccacactgccaggtgctatcagcccagcctggctcggaggaggagcttgaggagctgtgt
gaacaggccgtgtga
DBGET
integrated database retrieval system
