Nannospalax galili (Upper Galilee mountains blind mole rat): 103741853
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Entry
103741853 CDS
T03372
Symbol
Ctcfl
Name
(RefSeq) CCCTC-binding factor like
KO
K23195
transcriptional repressor CTCF
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngi03000
]
103741853 (Ctcfl)
03036 Chromosome and associated proteins [BR:
ngi03036
]
103741853 (Ctcfl)
Transcription factors [BR:
ngi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103741853 (Ctcfl)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103741853 (Ctcfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
Zf-C2H2_ZNF451_C
GAGA
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-C2H2_ZNF462_1st
zf-C2H2_jaz
TFIIIA_zf-C2H2
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
103741853
NCBI-ProteinID:
XP_008841012
LinkDB
All DBs
Position
Un
AA seq
728 aa
AA seq
DB search
MAATKDPSEQFTQIKEQKLKLGGPQEEEGEGGVQGGQIQEGAVEALAENSHQPLDARIQK
EQLELLWASVESDSQILTLQTVPLPSQEVHMPGLGWLSVPDPESLQVVVPQATEPQAEGA
PPLPSVLWLNQEPQCSIQQNVAFSVPEELYLPEEELPWFHLLRENMTVVGEDQALTPNLG
GSSALMKFEEGQENQWLSEGGLNQGEECCFLVEMMPRDEGKEDVVLAISSVNVEEQDKPA
PSQADVENTDAVKTQRKGTIRTFRCDLCPFTSSKYSSLSRHIKIHSDKKPHMCHLCLKTF
RTVTLLRNHVNTHTGTRPYKCGNCNMAFVTNGELVRHRRYKHTYEKPFKCSICNYASVEA
SKLKRHVRSHTGERPFQCCLCSYASKDACKLKRHMRTHSGEKPYQCSVCSARFTQSGTLK
MHVAQKHDENVSKYTCPHCAAVIARKSDLRVHLRKMHSYSPVETKCRYCPASFHERFAFI
QHQKTHKDEKKFKCQYCDYACKQKHCMVAHVRIHTGEKPFVCVTCDKHFRQKQLLTEHLR
KFHDPNFVPTEHQCLKCSRSFSRWTNLQRHKKKCDPEQQKLATSSRGSPMPEPKQTVWEE
AGQEDGGPVNTHRLQGLLSAAPAVPVTSPSLVNGLIFLFAWLPVPCKLTQARLSLKGFLH
PYIRKSPDLYSTRLHLDQNATAQEDATLREAQLPGELTLGHHEESTGGGSKDLDEGLTCE
MIFNMMDK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggcagccactaaggacccttctgagcagttcacccaaatcaaggagcaaaaattgaag
cttgggggcccgcaggaggaagaaggggagggtggggtgcaaggcgggcagatccaggag
ggtgctgtcgaagctttggccgagaacagccaccagcctttagatgccagaatccagaaa
gaacagcttgagctgctgtgggcctccgtggagagcgacagtcagatcctgaccctgcag
accgtgcccctgccctcccaggaggtgcacatgccggggctgggatggctgagtgtgccg
gaccccgagtctctgcaggtagtggtgccacaggcgacggagccacaggcggagggcgca
ccgccgctcccatccgtgttgtggctgaaccaggagccccagtgcagcatacagcagaac
gtggccttcagcgtcccagaggagctgtacctgcccgaggaggagctgccatggttccac
ctgctgagggagaacatgacagtggttggggaggaccaagcgttaacaccaaacctgggt
ggtagctcggcgctgatgaagttcgaagaaggccaggagaaccagtggctgtctgaggga
ggactgaaccaaggagaggagtgctgcttccttgtggaaatgatgccaagagatgaaggg
aaagaggacgttgttctggccatttccagtgtaaacgtagaagagcaagataaacccgcc
ccaagtcaggcagacgtggagaacactgatgctgtaaaaactcagagaaaggggacgatt
cgaaccttccgctgtgacctctgcccattcacatcctctaaatactcaagtttgagtcgt
cacataaagattcacagtgacaagaaacctcacatgtgccatctgtgcctgaagactttc
cgcactgtcaccctcctgcggaaccacgtcaacacccacacaggaaccaggccctacaag
tgtgggaactgcaacatggcgtttgtcaccaacggagagcttgtccggcacaggcgttac
aaacacacgtatgagaagcccttcaaatgctccatatgcaactacgccagtgtggaggcc
agcaagctgaagcgtcacgtccgctcgcacacgggtgaacgtccctttcagtgctgcttg
tgcagctacgccagcaaggacgcctgcaagctgaagcgccacatgcggacccactcaggt
gagaagccataccagtgctccgtctgctctgcccggttcacccagagcgggaccttgaaa
atgcacgtggcacagaagcatgatgagaacgtgtccaagtacacgtgtccccactgcgcc
gctgtcatcgcgaggaagagtgacctgcgtgtccacttgcgcaaaatgcacagctacagc
cccgtggagaccaagtgccgctactgccccgccagctttcatgagcgctttgcttttatt
caacaccagaagacccataaggacgagaagaagttcaaatgccagtactgtgattatgct
tgcaagcagaagcactgcatggtagcccacgtgcgcatccacacgggagagaagcccttc
gtctgtgtgacctgtgacaagcacttccggcagaagcagctgctcaccgaacacctgagg
aagttccatgacccaaactttgtccccactgagcaccagtgcctcaagtgcagcagatcc
ttttcccgctggactaacctgcaaagacacaagaagaagtgtgacccagagcagcagaag
ctggccacctccagcagggggagtccgatgccagagccgaagcagacagtctgggaggaa
gcaggacaggaagacggaggccctgtcaacacccacaggctccaagggcttctcagtgca
gcccctgcggtcccggtgacctcgccgtcccttgtcaacggcctcattttcctcttcgcc
tggctgcctgtcccctgcaaactgactcaagcccgactctcactaaagggcttcctccac
ccatacatcagaaagtctcctgacctctactctacccgtctgcaccttgaccagaatgct
actgcccaggaggatgccaccttgagggaggcacagctccccggggagctgactctgggc
caccatgaagaaagcaccggtggggggagcaaggacctcgatgaaggcctgacctgtgag
atgatcttcaacatgatggataagtga
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integrated database retrieval system
