Nannospalax galili (Upper Galilee mountains blind mole rat): 103742196
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Entry
103742196 CDS
T03372
Symbol
Helz
Name
(RefSeq) helicase with zinc finger
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103742196 (Helz)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
103742196 (Helz)
3'-5' decay
Other 3'-5' decay factors
103742196 (Helz)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
UvrD-helicase
AAA_30
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_7
Bac_DnaA
AAA_16
Mg_chelatase
AAA_5
Motif
Other DBs
NCBI-GeneID:
103742196
NCBI-ProteinID:
XP_008841418
UniProt:
A0A8C6RZR8
LinkDB
All DBs
Position
Un
AA seq
1947 aa
AA seq
DB search
MEDRRAEKSCEQACESLKRQDYDMALKHCTEALLSLGQYSMADFTGPCPLEIERIKIESL
LYRIASFLQLKNYGQADEDCRHVLGEGMAEGEGAFRAVLCCMQLTGKLQPVSSILAKSLS
GESLNGMVTKDLTRLKTLLTETETAASSVLSGYRTEDLDEGSCNGWHFRPPPRGITSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQSESKQLSGSYMETLI
EKWMNSLSPEKVLSERIEGIKVEHSPDLSVTVNTKKSHQTWTFALTCKPARMLYRVALLY
DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGT
FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNE
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKSNYQSRLHDLLYIEEIAQYKEVSKFNL
KVQLQILASFMLTGVSGGAKYAQDGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVL
KEKLVLTQGTKEKVYEATIEEKTKDYIFLRISRECCEELNLRPDCDTQVELQFQLNRLPL
CEMHYALDRIKDNGVLFPDISMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ
LPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTHSNSAADLYIKDYLHPYVEAGN
PQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLC
QLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERN
LHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYP
LTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQ
VFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDS
TEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENHSLHG
ITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHSGSSSKQQQSPPKGKSLLHTQND
HYPNDAIVQPSPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVY
GGNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPV
SIGQPQNQHPEKDQPEQNRNGKTDTNNPGSEISKTRTPEKKPTEPKQVDLESNPQNRSPE
SRPGVYPNTKFPRKDNLNPRHINLPLPTPHSQYAIPSRHFHPLPQLPRPPFPIPQQHTLL
NQQQNNLPEQPNQMAAQSNQVVQQQSQVTPPAPPPPPPPPPPPQLSPAYQAGPTNAFFNT
AVAHQPQSPPTEAVVPEQQPPPILPDSHSPLRAIAQPGPILPSHLNTFIDESSPGLPIGE
ALDRMHGSVALETLRQQQARLQQWSEQHAFLNQGSIPYAPHHPHLQPLPQPPMGLHQPPV
RAEWKLASSAEDEAETTFSRFQDLIRELSHRDQGDTREAAEMPPPQSRLLQYRQVQARSP
PAVPSPPSTTDHSSHFSNFSDSSRDTEVANNPAFPQRLAPQIFSSPFSLPSEHLTPPPLK
YLAPEGAWNFASLPQNHLIGPGFPYGLPPLPHRPLQNPFIQIQNHQHAVSQEPFHPLSSR
TVSSSSLPSLEEYEPRGPGRPLYQRRISSSSVQPCSEEASTPQDSLAQGKELQDHSHPPA
FSFPSPESWASTTSSASYQNIPCNGSSRAAQPRELIAPPKTVKPPEDQLKPDTGEGSSSF
NYSVLQHLGQFPPLMPNKQIAESANSSSQQSLATSKPAMSYASALRAPPKPRPPPEQAKK
SSDPVSLFQELSLGSSTGGNGFYSYFK
NT seq
5844 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagctgaaaagtcatgtgaacaagcatgtgagtccctgaagaggcag
gactatgacatggcactcaagcactgcacagaggccctcctttctcttggccagtactcc
atggcagacttcacagggccatgtccactggagatagaacgcatcaaaatagagagtctt
ctttacagaattgcctctttcttgcaactgaaaaactatgggcaagctgatgaagattgt
aggcatgtgctgggggaaggaatggctgagggagagggtgccttccgggcagtgctgtgc
tgcatgcagctgacagggaagctccagcctgtgtcctccatcctggccaagtcgctgtcg
ggagagtccctgaatgggatggtaacaaaagatttgacaagactgaaaacacttctcaca
gaaacagagacagcagcgagtagtgtcctctctggatatcgtacggaagacttggatgag
gggtcttgtaatggttggcatttccgcccaccacctaggggaatcacaagcagcgaggaa
tatactttgtgtaaaagatttttagagcaaggaatctgtaggtatggtgcccagtgtact
tcagcacattcccaggaagaactagcagagtggcagaaaaggtatgcctcccggctgata
aaactcaaacaacaaagtgagagcaaacagctctcaggcagctacatggagaccttgata
gaaaagtggatgaattcactgtcgcctgagaaagtgcttagcgaacgcatagagggaatc
aaggttgagcacagccctgacctgtcagtcactgtcaacaccaaaaaatcccaccagacc
tggacctttgctctcacctgtaagcctgcaagaatgctgtatcgtgtagcattgctttac
gatgctcatcgtcctcattttagtatcattgcaatatctgccggagatagtactacccag
gtatcacaagaagtccctgaaaactgtcaagaatggataggaggaaagatggcccaaaat
ggattagatcattacgtgtataaagtcgggatagcatttaacacagaaatatttggaact
tttcgccaaaccatagttttcgactttggattggagccagtactcatgcaaagagtaatg
attgatgcggcttctacagaagatcttgaatacctgatgcatgcaaagcagcagctagta
accacagctaagcgctgggattcttcttctaagactattatagattttgaacctaatgaa
actactgatttggagaagagccttctgatcagataccaaattcctctttctgctgaccag
ctgtttactcagtccgttttagacaaatcattgaccaagagcaactatcagtcacggttg
catgacctgctttatattgaggagatagcccagtataaagaagtcagcaagttcaacctt
aaagtgcaattgcagattctagcaagcttcatgctcactggagtctctgggggtgcaaag
tatgctcaggatggacaactctttggtcgttttaagctcactgaaacactttctgaagat
actttggctggacgactggtgatgaccaaagtcaatgctgtttatttattaccagtcctt
aaagagaagttagtgctgacccagggaaccaaagagaaagtttatgaagctactattgaa
gaaaaaacaaaagattatatatttttaaggatatccagggaatgctgtgaagagcttaat
cttcgacctgactgtgacacacaggttgaacttcagtttcaattgaatcgattacccctc
tgtgaaatgcattatgcactagacaggatcaaggacaatggtgttttgtttccagacatc
agtatgactcctaccataccatggagtcccaacagacaatgggatgaacagttggatccc
cgactaaatgcaaagcagaaagaagctgtcctggccatcaccacccctctctccatccag
ctgccgcctgtcctcatcatcggaccctacgggacgggcaaaaccttcacactggcccag
gctgtcaagcacatactgcagcagcaggagacgagcaggattctcatttgcacccattct
aatagtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaat
ccccaggcaagacctctcagggtatatttccgaaatcgctgggtgaagactgtccaccca
gtcgtgcatcagtactgtttgatctcaagcgcacactccacctttcagatgccccagaaa
gaagatattcttaaacatcgagtggtggtggttacattgaacacttcccagtacctctgt
cagctggaccttgaacctgggttttttactcacattttgttagatgaagccgcccaggcc
atggagtgcgagaccatcatgcctctagccttagcaactaaaaacactcggattgttttg
gctggtgatcacatgcagctcagtccttttgtttacagcgagtttgccagggagagaaac
cttcatgtttcattacttgatcgactctacgagcattaccctgccgagtttccatgcagg
atcctcctgtgtgagaactaccggtcccatgaagctatcatcaactatacctctgagctt
ttctacgagggtaaactgatggccagtggaaagcagcccgcacacaaggacttctaccca
ctaactttttttacagcacgaggggaagatgtacaagaaaaaaatagcactgctttttat
aataatgcagaggtgtttgaagtggtggaacgtgtagaagagctaagaaggaagtggcca
gtagcatgggggaaattagatgatggcagtatcggtgtggtgactccatatgctgaccaa
gtgtttaggatacgtgctgaacttagaaaaaaaagactctctgatgttaatgtagaaagg
gtgctaaatgttcaaggaaagcagttcagagttttgtttcttagcacagtacgtacaaga
cacacttgtaagcataagcagacaccaattaaaaagaaagaacaacttctggaagattcc
actgaggacttagattatgggtttttatctaactacaaacttctcaacactgccatcacg
agggcacagtcgctggttgcggtggtgggtgatcccatcgctctgtgctctattggaagg
tgtaggaagttttgggaacggtttattgccctgtgtcatgaaaatcacagcctacacggg
atcacatttgaacagatcaaggcacagttagaggctttagaactcaagaagacatatgtg
ttgaatccactggctcctgagtttattccccgggctttacgactgcagcattcaggaagc
agcagcaaacagcagcagtcaccacccaaggggaaaagcctccttcatacccagaatgat
cactacccgaatgatgcaattgtgcagcccagtccttccgtactcattggcaatcctatt
agagcatacactcctccaccccctcttggacctcacccaaatttgggaaaatctccaagc
cccgttcaaagaatagatcctcacactgggacaagcattctttatgtacctgctgtctat
ggagggaatgtagttatgtcggtgcctttacctgtaccatggacaggataccagggtagg
tttgcagttgatcctcgaattattacacatcaagcagcaatggcatacaatatgaacctg
ttacagacacatggacgagggtctcctataccttatggccttggacatcacccacctgtc
agcataggacagccacagaatcagcatccagagaaggatcaacctgagcaaaatcgaaat
gggaaaactgatacaaataatcctggatctgaaatcagtaagactcgaacaccagaaaaa
aagcctacagaacccaaacaggttgatttggaatcaaacccacagaacagaagtcctgaa
tcacgtcctggtgtttatcccaatactaaatttcctcgcaaagataatctcaatccaaga
catataaatcttcctcttcccacaccccactcacagtatgcaatccctagccgccatttt
catccgcttccccagctacccagaccaccatttcctattcctcagcagcacaccttgtta
aatcagcagcagaataatttgcctgaacaaccaaatcaaatggcagctcagtcaaatcag
gtagtccagcagcaaagccaggtgactccgccagccccaccgccaccaccaccaccaccg
ccacctccccagctttctcccgcatatcaggcagggcccaccaatgcatttttcaatact
gcagttgctcaccagccacagtctcctcctacggaggctgtggttcccgaacagcagccc
ccacccattctgcctgacagccacagtcctctgagagccatcgcacagcccggccctatc
ctcccttcacatctgaacaccttcattgacgagagctccccaggattacctataggagaa
gctttggatcgcatgcacggaagcgtagctctggaaacactgagacagcagcaggcgagg
ttacagcagtggagcgagcagcatgcttttctcaaccagggcagcatcccatatgccccc
caccaccctcatctccagcctcttcctcagcctcctatgggtctccaccagccaccagtg
agggcagaatggaaactggccagcagtgctgaagatgaagcagaaacaacattctcaaga
tttcaagacctaatcagagagctgtctcatcgtgatcaaggtgacactcgagaagcagct
gagatgccgccacctcagtcaagacttttgcaatatcgacaagtacaggctagaagccca
ccagcagtcccatctcccccttctaccacagaccacagcagccacttttctaactttagt
gacagcagcagagacactgaagtagccaacaacccagcgttcccacagcgcctcgctcct
cagatattcagctcccccttctccttgccgtctgaacacctcaccccacctcccttgaaa
tacctggctcctgaaggagcatggaattttgctagcttgccacagaatcacttaataggg
ccaggctttccctatggcctacctccgttgcctcacaggccactgcagaacccttttata
caaatacagaaccatcaacatgctgtcagtcaagagccatttcacccattgtcatctcga
acagtatcttcttcttcgctccccagcttagaggagtatgagcccagaggacctggtcgg
cccttgtaccaaagaagaatctcatctagctcagtccagccttgctccgaagaggcaagc
actccccaagacagcctggctcagggtaaagagctgcaggaccacagccacccacctgct
ttcagcttcccatccccagagtcgtgggccagcaccacctcatctgcctcctaccagaac
attccgtgcaatggatccagcagggcagctcagcccagagagttgatagctccacccaag
actgtcaaaccgcctgaggatcagctgaagcctgatactggggaggggtccagctccttc
aactacagtgtgctgcagcacctgggccagttcccacccctcatgcccaacaagcagatc
gcagagtcggccaatagcagcagccagcagagcttggccaccagcaagcccgccatgtcc
tacgccagtgccctccgggccccgcccaagcccaggcccccacctgagcaggccaagaag
agcagcgaccccgtgtctctgttccaggagcttagtctggggagcagcacaggtggcaac
ggcttctactcttactttaaataa
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integrated database retrieval system
