Nannospalax galili (Upper Galilee mountains blind mole rat): 103742212
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Entry
103742212 CDS
T03372
Symbol
Wipi1
Name
(RefSeq) WD repeat domain, phosphoinositide interacting 1
KO
K17908
autophagy-related protein 18
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04136
Autophagy - other
ngi04140
Autophagy - animal
ngi05010
Alzheimer disease
ngi05014
Amyotrophic lateral sclerosis
ngi05016
Huntington disease
ngi05017
Spinocerebellar ataxia
ngi05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103742212 (Wipi1)
04136 Autophagy - other
103742212 (Wipi1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
103742212 (Wipi1)
05014 Amyotrophic lateral sclerosis
103742212 (Wipi1)
05016 Huntington disease
103742212 (Wipi1)
05017 Spinocerebellar ataxia
103742212 (Wipi1)
05022 Pathways of neurodegeneration - multiple diseases
103742212 (Wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngi04131
]
103742212 (Wipi1)
03029 Mitochondrial biogenesis [BR:
ngi03029
]
103742212 (Wipi1)
Membrane trafficking [BR:
ngi04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
103742212 (Wipi1)
Mitochondrial biogenesis [BR:
ngi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103742212 (Wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_RSE1_2nd
EIF3I
DUF5711
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
BCAS3_WD40
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
103742212
NCBI-ProteinID:
XP_008841437
UniProt:
A0A8C6QER8
LinkDB
All DBs
Position
Un
AA seq
446 aa
AA seq
DB search
MEAEAADAPPGRVQAALSCFSFNQDCTSLAIGTKAGYKLFSLSSVEQLDQVHGSNEIPDV
YIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYSYSSNILSIRLNRQRLLVCLEES
IYIHNIKDMKLLKTLLDIPSNPTGLCALSINHSNSYLAYPGSLTSGEIVLYDGNSLKAVC
TIAAHEGTLAAITFNSSGSKLASASEKGTVIRVFSVPEGQKLYEFRRGMKRYVTISSLVF
SMDSQFLCASSNTETVHIFKLEHLTTSHPEEPSTWSGYMGKMFMAATNYLPAQVSDMMNQ
DRAFATGRLSFSGQKNICTLSTIQKLPRLLVASSDGHLYIYNLDPQDGGECVLIKTHSLL
GSGTTEENKENDLGPSIPQSYAATVARPSTSVASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPIILCRGSQKGKSKQS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaggccgcggatgcccctccgggccgggtgcaggcggcgctcagctgcttc
tctttcaaccaagattgcacgtcactagcgattggaaccaaggccggttataagctgttt
tctctgagttctgtggagcaactggaccaagtccatggaagcaatgaaatccccgacgtg
tacattgtggagcgcctcttctccagcagcctagttgtagtggtcagtcacacaaagcca
cggcagatgaacgtgtaccacttcaagaaaggcactgagatctgcaattatagctactcc
agcaacatcttgtccataaggctgaaccgacagcggctgctggtctgcctagaggagtcc
atctatatccacaacattaaagatatgaagctcttgaagaccctcttggatattccctca
aacccaacaggtctatgtgccctctctatcaaccattccaactcctacctggcatatcct
ggaagcctgacttcaggcgagattgtgctttatgatggaaactccctgaaagcagtgtgc
accatcgctgcccatgagggaacgctggccgccatcaccttcaactcctcaggctccaaa
ctagccagtgcatccgagaaaggcaccgtcatccgggtgttctctgtgcctgaagggcaa
aagctctatgagtttcggcgaggaatgaaaaggtacgtgaccatcagctctctagttttc
agcatggactcacagttcctgtgtgcctccagcaatacggaaactgtgcacatcttcaag
ctggagcacctcactaccagccacccagaagagccttccacgtggagtggctacatggga
aagatgttcatggccgctaccaactacctccccgcccaggtgtcggacatgatgaatcag
gacagagctttcgccactggacgcttgagcttctccgggcagaagaacatctgcacactc
tccacgatccagaaattgccacggctgctagtagcctcctctgatggacacctttacatc
tacaatctggacccacaggatggaggcgaatgtgtcttaatcaaaacccacagcttgctt
ggctccggaacaacagaagagaacaaagaaaacgacctcggaccctccatacctcagtct
tacgcagcaactgtagcaaggcccagcacatctgtggcatccactgtgccgggttactct
gaggacggcggggcgctccgaggagaggtgattccggaacacgagtttgccacgggacca
gtgtgtcttgacgacgagaatgagtttccccctataatcttatgccgtggaagtcagaag
ggcaaatcgaagcagtcctga
DBGET
integrated database retrieval system
