Nannospalax galili (Upper Galilee mountains blind mole rat): 103742231
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Entry
103742231 CDS
T03372
Symbol
Ss18l1
Name
(RefSeq) SS18L1, nBAF chromatin remodeling complex subunit
KO
K15623
protein SSXT
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03082
ATP-dependent chromatin remodeling
ngi05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103742231 (Ss18l1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
103742231 (Ss18l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngi03036
]
103742231 (Ss18l1)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103742231 (Ss18l1)
GBAF(ncBAF) complex
103742231 (Ss18l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
103742231
NCBI-ProteinID:
XP_008841453
UniProt:
A0A8C6RF04
LinkDB
All DBs
Position
Un
AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHPQGSLSDAISTGLPPASLMQ
GQIGNGPNHVSMQQTAQSTLPTTSMSMSGSGHGTGPGYSHSGPTSQSVPMQGQGAISNYV
SRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQSPITMMGQGSQGSSMMGQRPMAP
YRPSQQGSSQQYLGQEEYYSEQYSHSQGAAEPMSQQYYPDGHGDYAYQQSSYTEQSYDRS
FEDSTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYAGQQQGYGPAQGAPSQ
YSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggccttcgcgtccgcgcggccgagaggcaaaggggaggtcacgcagcagacc
atccagaagatgctggatgagaaccaccacctaatccagtgcatcctggactaccagagc
aagggcaagacagcggagtgcacccagtaccagcagatcctgcaccggaacctggtctac
ctggccacaatagcagactccaaccagaacatgcagtcgttgcttcctgctccaccaaca
cagaacatgaacctgggacctggggcgctgagtcagagtggttccagccagggtctgcac
ccccagggcagcctcagcgatgccatcagcacaggcctgcctcctgcctccctcatgcaa
ggccagattggtaacggtccaaaccatgtgtccatgcagcagacggcccagagcacacta
cctacaacttccatgagcatgtcgggcagtggccatggtactgggcctggctacagccac
tcaggacccacctcgcagagtgtccccatgcaaggccaaggtgccatcagcaactatgtg
tctcggaccaacatcaacatgcagtccaacccagtttccatgatgcaccagcaggcagct
acatcccactacaactcggcacagggtgggagccagcactaccagggtcagtcacccatc
accatgatgggccagggcagccaagggagcagcatgatggggcagcgccctatggcgccc
taccggccctcccagcaagggtcttcccagcagtacctgggccaggaggaatactacagt
gaacagtacagccacagccagggtgctgcggagcccatgagccagcagtactacccagac
ggccacggcgactacgcctaccaacagtcgtcttacacagagcagagctacgaccgctcg
ttcgaggattccacacagcactactatgaggggggaaattcccagtacagtcagcagcag
gctgggtaccagcagggcacggcccagcagcagacatactcccagcagcagtaccccaac
cagcagagctacgcagggcagcagcaaggctacggccctgcccagggagccccgtcacag
tattcgagttatcagcaaggtcaaggccaacagtatggaagctacagagcatcgcagacg
ggaccctctgcccagcagcagcggccttacggctatgagcagggccagtatggaaattac
cagcaataa
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