Nannospalax galili (Upper Galilee mountains blind mole rat): 103742449
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Entry
103742449 CDS
T03372
Symbol
Nup54
Name
(RefSeq) nucleoporin 54
KO
K14308
nuclear pore complex protein Nup54
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03013
Nucleocytoplasmic transport
ngi05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103742449 (Nup54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103742449 (Nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103742449 (Nup54)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103742449 (Nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
AKAP7_NLS
XhlA
Motif
Other DBs
NCBI-GeneID:
103742449
NCBI-ProteinID:
XP_008841723
LinkDB
All DBs
Position
Un
AA seq
563 aa
AA seq
DB search
MAFNFGTPSGTTGTAAATAAPAGFGGLETANSTASGFNFGGFGLTANPAVNFNIGNFGVS
TTSATPFNFGNSLASAGGFGGFGTTTTTAGSAFSFSAPTNTGSTGLIGSTQNKGFGFGTG
FGTATGTSTGLGTGLGTGLGFGGFNTQQQQQQQTTLGGLFSQPTQAPAQSNQLINTASAL
SAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSCMPNN
KDEDGLMVLVFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNLEGIKTLPDDQTEVVIYV
VERSPNGTSRRVPATTLYAHFEQANIKTQLQQLGVTLSMTRTELSPAQIKQLLQNPPAGV
DPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKN
QTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAP
TQFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDD
LEDIKLVEHGLNEAIHIRGGVFS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaattttgggactccatcgggcactactggcaccgctgcagccaccgcggca
cccgcgggatttggtgggcttgagactgccaactccaccgccagtgggtttaattttggg
ggtttcggattaactgctaaccctgcagtgaactttaatattgggaatttcggtgtttct
accacctcggcgactccgttcaattttggtaacagtctggcaagtgcaggtgggtttgga
ggatttggaacaacaactacaactgcaggctctgcattcagcttttctgccccaacaaac
acaggcagtactggactaatcggcagtactcagaacaaaggttttggctttggtactggt
tttggaacagcaacgggaactagcactggtttaggcactggtttgggaactgggctagga
tttggaggatttaatacacagcagcagcagcagcagcaaactacattaggtggtctcttt
agtcagcctacacaagctcctgcccagtccaatcagttgataaatactgcaagtgctctt
tctgctccaacactattgggagatgagagagatgctattttggcaaagtggaatcaactg
caggctttttggggaacaggaaaaggatatttcaacaataatattcctccagtggagttt
acacaagaaaatcccttttgccgatttaaggctgtaggttatagttgtatgcccaataat
aaagatgaagatgggctaatggttttagttttcaacaaaaaagaaacagatattagaagc
caacaacagcaattggtagaatcattgcataaagtcttgggaggaaaccagaccctgact
gtcaatttagaaggtattaagacattgccagatgatcagacagaggttgtcatttatgtt
gttgaacgttctccaaatggcacctccagaagagttccagcaacaacactatatgctcat
tttgagcaagccaatattaaaacacagttgcagcagcttggtgtaaccctttctatgact
agaacagaactttctcctgcgcagatcaaacagcttttgcagaatcctcctgctggtgtt
gatcctatcatttgggaacaagccaaggtggataaccctgattctgaaaaattaattcct
gtaccaatggtaggtttcaaagaacttcttcgaagactaaaggttcaagatcagatgact
aagcaacatcagaccagattagatatcatatctgaagatattagtgaactacaaaagaat
caaactacaactatggccaaaatagcacaatacaagaggaaactcatggatctttcccac
agaaccttacaggtcctaatcaaacaggaaattcaaaggaaaagtggctacgctatacag
gctgatgaagaacagttacgggttcagctagatactattcagtgtgaactaaatgcacct
actcagttcaagggtcggctaaatgaactgatgtcccaaatcagaatgcagaatcatttt
ggagctgtgaaatctgaagaaagatattacatagatgcagatctgttacgagaaatcaag
cagcatttgaaacaacaacaggaaggccttagccacttgattagcatcataaaggatgac
ctagaagatataaaactggttgagcatggattgaatgaggccatccatatcagaggtggt
gtctttagttga
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