Nannospalax galili (Upper Galilee mountains blind mole rat): 103742493
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Entry
103742493 CDS
T03372
Symbol
Atg13
Name
(RefSeq) autophagy related 13
KO
K08331
autophagy-related protein 13
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04136
Autophagy - other
ngi04140
Autophagy - animal
ngi04211
Longevity regulating pathway
ngi05010
Alzheimer disease
ngi05014
Amyotrophic lateral sclerosis
ngi05016
Huntington disease
ngi05017
Spinocerebellar ataxia
ngi05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103742493 (Atg13)
04136 Autophagy - other
103742493 (Atg13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
103742493 (Atg13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
103742493 (Atg13)
05014 Amyotrophic lateral sclerosis
103742493 (Atg13)
05016 Huntington disease
103742493 (Atg13)
05017 Spinocerebellar ataxia
103742493 (Atg13)
05022 Pathways of neurodegeneration - multiple diseases
103742493 (Atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngi04131
]
103742493 (Atg13)
03029 Mitochondrial biogenesis [BR:
ngi03029
]
103742493 (Atg13)
Membrane trafficking [BR:
ngi04131
]
Autophagy
Autophagosome formation proteins
ULK complex
103742493 (Atg13)
Atg1 complex
103742493 (Atg13)
Mitochondrial biogenesis [BR:
ngi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
103742493 (Atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
103742493
NCBI-ProteinID:
XP_008841765
LinkDB
All DBs
Position
Un
AA seq
549 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALSGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVATPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCSYRTGEDAGVT
YPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPTPVVTDTLRVPMAGLAFSHQLSSSR
LSCQPAGLGLGSADLAYPVVFTAGLNATHPHQLMVPGKEGGTPLAPNQPAHGAQADQERL
ATHTPSDGTHCAVTPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPVNQVTLT
SLDIPFAMFAPKNLELEDADPMVNPPDSPETTSPLHGSLHSDGSSGGSSGNTHDDFVMID
FKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVRE
FDAFVETLQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaattcccaggacagaaaggacctggacaaattcattaaatttttt
gccctcaagactgtccaagtgattgtccaggctcgacttggcgaaaagatttgcactcgt
tcatcttcttccccaacgggttcagattggtttaatttagcaatcaaagacatcccagag
gttacacatgaagcaaagaaggccttatcagggcagctgcctgctgtggggcgctccatg
tgtgtggagatctcactcaagacttctgagggagattccatggagctagaaatttggtgt
cttgaaatgaatgaaaagtgtgataaagaaatcaaagtatcctacactgtatacaacaga
ctgtcactgctgctgaagtctcttcttgctataacaagggtgactccagcctatagactc
tccagaaaacaagggcatgaatacgtaatattgtacaggatttattttggggaagttcaa
ctgaatggcttaggagaaggcttccagacagttcgtgttggaacagtggccacccctgtt
ggcaccatcactctttcttgtgcttatagaattaacttggcattcatgtccaccaggcaa
tttgagaggaccccacctatcatggggattatcattgatcactttgtcgaccgtccctat
cccagctcctctcccatgcacccctgcagttacagaactggtgaggatgctggagtaaca
tacccatcagtggaagattctcaagaagtgtgtaccacctctttctccacctctcctccc
tcccagtgtgtgtttactgtcacaaaggcacattttcagacccctactcctgtggtgacg
gacactctgagggtccccatggcaggactggccttttcccatcaactctcaagctctcgc
ctttcctgtcagcctgctggcctgggccttggatcagctgacttggcttacccagtagtg
tttactgctggcttaaatgctacacaccctcaccagctgatggttcctgggaaggaaggt
gggacaccccttgctcccaaccaacctgcccacggtgcccaggctgaccaggagagactg
gcaacccacaccccttctgatgggacccactgtgccgtcacaccctccagcagtgaggat
actgagactgtatccaacagcagcgagggacgggcctcaccccatgatgtcttggagact
atctttgtccgaaaagtgggagcatttgtcaataagcccgtcaaccaggtgaccctgaca
agtttagacataccctttgccatgtttgcacccaagaatttggagctggaggatgccgat
cctatggtgaatcccccagactctccagagaccacatctcctctccatggcagcctgcac
tcagatggctccagcgggggcagcagtggcaacacccatgatgactttgtcatgattgac
tttaagccagctttttctaaagatgacattcttccgatggacttggggaccttttaccgt
gaatttcagaatcctcctcagctgagcagcctctccatagatattggagctcagtccatg
gctgaagacttggactcgttacctgagaagctggctgtgcatgagaagaacgtccgagaa
ttcgatgcctttgttgaaaccctgcagtaa
DBGET
integrated database retrieval system
