Nannospalax galili (Upper Galilee mountains blind mole rat): 103743202
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Entry
103743202 CDS
T03372
Symbol
Rp1
Name
(RefSeq) RP1, axonemal microtubule associated
KO
K19538
retinitis pigmentosa 1
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ngi03037
]
103743202 (Rp1)
04812 Cytoskeleton proteins [BR:
ngi04812
]
103743202 (Rp1)
Cilium and associated proteins [BR:
ngi03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
103743202 (Rp1)
Cytoskeleton proteins [BR:
ngi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
103743202 (Rp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCX
DCX2_DCDC1
DUF5506
DUF5887
Motif
Other DBs
NCBI-GeneID:
103743202
NCBI-ProteinID:
XP_008842649
LinkDB
All DBs
Position
Un
AA seq
2125 aa
AA seq
DB search
MSKMPSTSFPMMHRTSSGGQVPSPRHSSVTHPVVAKRISFYKSGDPQFCGVQVVVNPRSF
KTFDALLDNLSRKVPLPFGVRNISTPGGRHSITKLEELEDGEAYLCSHGRKVQPVDLEKA
RQPPRPWLSSRSISTHAHLQPAGGPMAAPGVPRPPRRLVVFRNGDPKSRHVVLLSRRVTQ
SFDAFLYHLTQVMQCRVAKLYSTDGRKVPNLQAVILSSGAVVAAGREPFKPGNYDIQKNL
LPARLPGISHRVHRKGNARSESRKMNTHKPSIPRPQIYSLSSDKTHDCCSDCSFAPDNYL
ALGKQDSQNFSAYPSEDGIEKSIIFNQDGTMTVEMKVRVKIKEEETIKWTTTVNRAGLSN
NDEKSKISSYPGITDERSSTLELAACSLSAGVTSTQQEDNFAEEESTQVTDRQTETCSSA
TWENAAVDTNVIQGSQKKMKHHFYRPPTPGPRRTRQKKSVTGSVTLVSETEVQEKQFSYS
EERESREKSEYHMFTHSCSKMSSVSNQLVQINNNDQMDVSIERKKESALFKSKAINAGVV
ESTSQKTLKMCHNNALPSTAPENSTVEEGRIDSIISDKLGIKNFRTLDNTNDSFSPTLAD
TAHSSSNNSGTDKSISEVSSGGSSTVLTRMDKLVNEVARCSLAELPENGKQVLSSFSGKK
KKKSQQQMANTRYKRETETKGHANKNEKIKKEGILAQEMILQDSDSCLKGELLYEEDLDS
SDMIIDSYHFCSKSNLYPPVSKNLHKNKLNTIQIPKTQRLLAKRKSRAVRKVSLGGPRRG
GTGQANKVFLHSESKFYKSTLENQSFLHMFNLSEQKLKASYVPQSQVKIVSGTLRGTAKK
SLVPNVSDSHITLKSQKKQNGDKSKVGATVSKQHVTTTEDSLASLKMADFPKGVPHHSIQ
NYVQRWLQNVNPYPHLVHRESALLRKHKGNVENYNSNDFPGNNLHIISSKGKNFVMESNK
QKTKNASWADNNLCGEVGKSLFAKDNGEQLKHLCESQHEHSILSQTVVSDHNSKSHLSTE
KSGAEMSLINQEINLVPKGESVTAAVQVDALGENASKDHLPALLPHHLEVLVPDGHKNQT
GIAQIPGSFADGPSGVCHSSANLLLAWLLVLTLKGSMNSFCQGDSHKTVSRSSETVALFE
VLKHIPITEEADDLKAAVPSLAESTRKFSGSSEREDMAPVDLPENCTTAGIQRVPRCGGS
ERTQKILLDKGCWAREACDPERCDSEVKKPRDSPCEMCSVSMTCPPEEACDPSDAFFASD
SCTVGQPSTNDACLLGEPCLLTDAGCSSDTYVQENHIYEAPCWTEDTHIPISVCNTTDFL
NSKENKYTDNLELTEELTTVGEVQKDPNVLTDTGCKNDINVSPSHQNVSNLSSCDPFLNR
TDPEFGKNHSSLDELENCSLKKIQDKKKYMSCDKEESRASEEPGSITSSVIASEINNISE
LESFEELENQDTDTYNTELSAEKPTREESEARTHSKSINTPCRDVIEEERRNILLSETIS
MRQVTPPSLVFCSDSNKSTEEEINEGETNMRVKMMVKIMENGNCMDSSFDFTKRFKGPVT
SDWSDYRADSESEQPHRAPSNDCSDGDELTQEKEYHRGFVKRTVEKLCRKAETMKPAFLH
GPPHRSRVCPCNFMDSQCARKERFYDSEGQSFVSSEQMSRSSPTLQEFQEEQQGKYDGKS
MRDSYGGSTAEHRTEQNDHDKVLVDKEKGELIDTGKWLLWENHLLRVSPDNPGVYVNTDT
TSADTLPDNSSVGAPCSHFGNLAPGPTMTELSSSEMEEMTEPLERKCNYFNLLHASDSEP
FCEDVLDVKNRICGKMKIPNQHTEERGNHRSERVCTSVTQAFAPAGNKVHPVPDNTIKTQ
PLRGSHVTQGTLQEGDSLDKLYALCGQHCPILTVTIQPVNEEQRGFAYCKDSDIENSLGF
HLWRKIYPFLLQCQKSMSRDEKNKVSVNKGLADNTTGDPFDQLGFKNMCDLMNKRMKHKG
INFSNLEEEINLKKFQSYLKKIFCLDFLHTSLLIERGVNSNTQKHINWTNISETVDENNN
LLTNGFQNSRKNLNQVVRENTNGHFFFELLGQTCLLGICQPETTLRSKNGNMLEIHYVSG
GKILFIWEEENQLNLKDFEGSNEQR
NT seq
6378 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagatgccttctactagtttccccatgatgcatcgaacttcttcaggaggtcaa
gttccttcccctcgccattcaagtgtcactcatcctgtcgtggctaaacggatcagcttc
tacaagagtggagacccccaattctgtggcgtgcaggtggtggtcaaccctcgttccttt
aagacctttgatgccttgctggataacctgtctaggaaggtgcccctgccctttggagtg
cggaacatcagcacgcctggtggaaggcacagcatcaccaagctggaggagctggaggat
ggagaggcatacctgtgctcccacggtaggaaggtgcagccagttgacctggaaaaggcc
cgtcagcctcctcgtccctggctcagcagcaggtccataagcacgcatgcgcacctgcag
ccagcaggcggccccatggctgccccaggcgtgccccgccccccacggaggctcgtggtc
ttccggaacggcgacccaaagtcgaggcatgtggtccttttgagccggagggtgacccag
agcttcgacgcctttctgtaccacctgacacaggtcatgcagtgccgggtggccaagctg
tactccactgatggaaggaaggttcctaatctgcaggcggtgatactgagctctggagct
gtggtcgcagcaggaagggagccatttaaaccaggaaattatgacatccaaaagaacttg
cttcctgctagattaccagggatctctcatcgtgtgcaccggaagggaaacgctaggtca
gaaagcagaaagatgaacacacataagccttcaatcccaagaccccagatttactctctt
tcttctgataaaacacatgattgctgttcagactgttcgtttgctccagacaattacttg
gccttaggaaaacaagattctcagaatttttcagcatatccttctgaagatggtattgag
aagtcaattatttttaatcaagatggtactatgacagttgagatgaaagttcgagtcaag
ataaaagaagaggaaaccataaagtggacaaccactgtcaatagagccggtctttctaat
aatgatgaaaagagtaagataagtagttatccgggaataacagatgagcgatcgtctact
ttggagcttgcagcatgttcgttatctgcgggtgtcacaagtactcagcaagaggataat
tttgcagaggaagaaagcactcaagtgacagatcgacagactgaaacttgtagttctgct
acttgggagaatgctgctgtggacacaaacgtcattcagggaagtcagaaaaaaatgaag
catcatttttataggcctccaactcctggaccaaggagaacaagacaaaagaaatctgtg
acagggagtgtgaccttagtatctgaaacagaggttcaagagaagcagttttcttatagt
gaagaaagagagagtagagaaaaatctgagtatcacatgtttacacattcttgcagtaaa
atgtcctcagtatctaatcaacttgttcagatcaataacaatgaccagatggatgtatca
atagaaaggaaaaaggaaagtgcactcttcaagtcaaaagccataaatgcaggtgttgta
gaaagtacaagccagaagacattaaagatgtgccataacaatgctttaccatcaactgca
ccagagaactcaactgtggaggaaggtaggattgatagtattatatcagataaactgggt
atcaagaacttcagaactcttgacaacaccaatgacagtttcagtcctactttagcagac
acagctcactcctcaagtaacaactctggaactgacaaaagtatttctgaggtttcttca
ggagggtcctctactgtcctcacaagaatggacaaactggttaatgaagttgctcggtgt
agtttagcagaacttccagaaaacggaaaacaggttttgtcctcgttctctggcaaaaag
aagaagaaatctcagcagcaaatggcaaataccaggtataagagagagactgaaaccaaa
ggacatgctaataaaaacgagaaaataaagaaagaaggaatacttgcacaggagatgatt
ttgcaagattctgacagttgccttaaaggggagctactttatgaggaagaccttgattca
agtgatatgataattgactcatatcatttttgttccaagagtaatctctatcccccagtt
tccaaaaatctccataaaaataaattaaatactattcaaattcctaagacccaaagactt
ttagccaaaagaaaatccagagcagtaaggaaggtaagcttaggaggacctagaagagga
ggaactggtcaagctaacaaagtgtttctccatagtgaatctaaattttataaaagtact
ttggaaaatcaaagttttcttcatatgtttaacctttctgagcaaaaactgaaagcttct
tatgtaccacagtctcaagtaaaaatagtatctggaactttgagaggaacggcaaaaaag
agtttagttcctaatgttagtgactcacacataactttaaaaagccagaaaaaacaaaat
ggagataaatcgaaggtaggtgctacagtcagtaaacagcatgttacaaccacggaagac
tctttagcttctttgaaaatggctgattttcccaagggtgttcctcatcattcaattcaa
aattatgtacagagatggttgcagaatgtaaatccatatccacatctagtgcatagggag
tcagctctgctacgcaaacataaaggaaatgtggaaaattataacagtaatgattttcca
ggaaataatctccatataatctcttcgaaaggaaagaattttgtcatggaaagtaataag
cagaaaactaaaaatgccagttgggctgacaataatctatgtggggaggtgggtaaatct
ctttttgctaaagataatggtgaacaacttaaacatctctgtgagagtcagcatgaacat
agtattttgtcacagacagttgttagtgatcataatagtaaaagtcatctgtctactgaa
aagtcaggcgccgaaatgagccttattaatcaagaaataaacctagttccaaagggggaa
agtgtaacggctgccgttcaggtggacgccttgggagagaatgcttcgaaagaccactta
ccggccctgttgcctcaccacctggaagttttagttcctgacggccacaagaatcagact
ggaattgctcaaataccaggttcctttgcagatggcccttctggagtatgtcattcatct
gctaatctccttctagcctggcttttggtgctgactctaaagggaagtatgaatagcttc
tgccaaggggattcacacaagactgtgagcagatcttcagaaacagttgcacttttcgag
gttctaaagcacatccccatcacagaggaagctgatgacttaaaggctgctgttcccagt
ttagcagaatcaaccagaaagttcagtggatccagtgagagagaagacatggctccagta
gatcttccagaaaattgtaccacagccggcatccagagagttcccaggtgtggaggaagt
gaaagaactcagaaaatcctattggacaaaggctgctgggccagggaggcctgtgaccct
gagcgctgtgattcagaagtgaagaagccacgtgactctccatgtgagatgtgctctgtg
agtatgacttgtcctccagaagaggcatgtgaccctagtgatgctttctttgctagtgat
agttgtactgtgggccagccctccacaaatgatgcttgcctcctaggagagccctgttta
cttactgatgcagggtgttcctctgacacttatgttcaggagaaccacatctatgaagcc
ccttgctggactgaggacacccacattcccatcagcgtctgcaataccactgactttttg
aattccaaagaaaacaaatacacagataacttggaattaactgaagagttaacaacagtt
ggtgaagttcagaaagatccaaacgttttgacagacactgggtgtaaaaatgacattaac
gtatcaccatcacatcaaaatgtgagtaacttaagctcctgtgaccctttcctaaataga
actgacccagaatttggtaagaaccatagttctttagatgaacttgaaaattgttcatta
aagaaaattcaggataaaaagaaatatatgtcctgtgataaggaagaatcgagggcctct
gaagaaccaggctcaataaccagcagtgtgatagcaagtgaaataaataatatttcagaa
ttagaatcttttgaagaattagaaaatcaagacactgatacctataacacagagttaagt
gctgaaaagccaactcgagaagagtcggaggctaggacacattccaagtcgataaacacg
ccgtgtagggatgttatagaagaggaaagaagaaatattctgctttctgagacaattagc
atgaggcaggtgacaccaccatcattagttttttgctctgattctaataaaagtactgaa
gaggagatcaatgaaggagaaactaacatgagagttaaaatgatggtaaaaatcatggaa
aatggaaattgtatggattcctcttttgattttacaaaacgtttcaaaggtccagtgact
tcagactggtcagattatagagcagacagtgagagtgagcagccacacagagcacccagc
aatgactgcagtgatggtgatgagctcacccaggagaaggaataccacagagggtttgtt
aaaaggacggtagaaaagctttgcaggaaggcagagactatgaaaccagcctttcttcat
gggcctccacacagatctcgagtttgtccttgtaattttatggacagccagtgtgctagg
aaagaaaggttttatgattctgaagggcagtcatttgtctcatctgaacagatgtctagg
agttcacctacgctgcaggagtttcaggaggaacaacaaggtaaatatgatggtaagagt
atgagggacagttatgggggcagcactgcagagcacagaactgaacaaaacgaccatgac
aaggtcctcgtggacaaggagaaaggagagctgattgacactggtaaatggctcctgtgg
gaaaaccacttgctgagggtgtcacctgacaatcctggtgtgtatgtcaatacagacacg
acctcagcggacaccctacctgataacagcagcgttggggctccatgttcgcattttgga
aatttagcccctggcccaacaatgactgaactatcctcttcagaaatggaggaaatgact
gaaccacttgaacggaaatgcaattattttaacttgcttcatgctagtgactctgaacct
ttttgtgaagatgttctagatgtgaagaatagaatctgcggcaaaatgaaaataccaaat
cagcatacagaggagcggggtaaccatcggtctgaaagagtgtgcacgtctgtcacgcaa
gcctttgcacctgctggtaataaagtccaccctgttcctgacaatactattaaaactcaa
ccattacgtggcagtcatgtgactcaaggtacacttcaggaaggtgactctttggataaa
ctttatgctctttgtggtcagcattgcccaatacttactgttactattcaacctgtaaat
gaggaacagagaggatttgcttattgtaaagattctgatattgaaaattctttgggtttc
catttatggaggaaaatatacccatttttgctacagtgccaaaaaagcatgtccagggat
gagaagaataaggtgagtgtgaacaaaggacttgctgataacaccactggtgacccattt
gatcaacttggtttcaagaacatgtgcgacttgatgaacaaaagaatgaaacacaaaggc
attaacttttcaaatttagaggaagagatcaatttaaagaaatttcagtcatatttaaag
aaaattttttgtttagatttcctgcatacatccttgttaattgagaggggtgtgaattcc
aatacacaaaagcatatcaattggacaaatatctctgaaacagttgatgaaaataacaac
ttattaactaatgggttccagaactcaagaaaaaatcttaaccaagtggtaagggaaaat
actaatggtcatttcttctttgaactgcttggtcaaacttgcctgttaggtatttgccaa
cctgagacaaccttgagaagcaagaatggaaatatgctagaaatacattatgtttctgga
ggtaaaattcttttcatttgggaagaggaaaaccaattgaatttaaaagattttgaaggc
agtaatgaacaaagatga
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integrated database retrieval system
