Nannospalax galili (Upper Galilee mountains blind mole rat): 103743226
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Entry
103743226 CDS
T03372
Symbol
Trip12
Name
(RefSeq) thyroid hormone receptor interactor 12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103743226 (Trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngi04121
]
103743226 (Trip12)
Enzymes [BR:
ngi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
103743226 (Trip12)
Ubiquitin system [BR:
ngi04121
]
Ubiquitin ligases (E3)
HECT type E3
103743226 (Trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
103743226
NCBI-ProteinID:
XP_008842681
LinkDB
All DBs
Position
Un
AA seq
2066 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSHLGQAKHKGNIPPESRKSNSKAPKAQ
SNTTELSRGHLSKRSCSSSSAVIVPQPEDPDRANTSERQKTGQVPKKDNSRGVKRSASPD
YNRTNSPSSAKKPRALQHFESLSETNKPHSKSKKRHLDQEQLKSAQLPSTSKAHTRKSGA
AGSSRSQKRKRTEISCVKSGSGSESTGAEERSAKPTKLASKSATSAKAGCSTITDSSSAA
STSSSSSAVASASSTVPPGARVKQGKDQNKARRSRSASSPSPRRSSREKEQSKTGGSSKF
DWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSL
RRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPESNQETVNSSAARTDETPQGA
AASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSG
ASSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHN
FDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHS
KAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQ
DKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTPPILSSGMFIMVVRM
FSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICEL
MPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEVAAHQVGEDE
ISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGYSELKKDDARAQLMKE
DPDLAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSH
IASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKHLAESESLLTSPPKA
CTNGSGSLGSTTSVSSGTATAATNATADLGSPSLQHSRDDSLDLSPQGRLSDVLKRKRLP
KRGPRRPKYSPPRDDDKVDNPAKSPTTTQSPKSSFLASLNPKTWGRLSAQSNSNNIEPAR
TAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRLCAA
TEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSREIRL
KRFLHVFFSSPLPGEEPIGRVEPVGNAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTG
GSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRG
YGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGEHLLPYNMTVYQAVRQF
SIQAEDERESTDDESNPLGRAGIWTKTHTIWYKPVREEEESSKDSVGGKRGRAQTAPTKT
SPRNAKKHDELWHDGVCPSVSNPLEVYLISTPPENITFEDPSLDVILLLRVLHAVSRYWY
YLYDNAMCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDT
RQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAESVM
QDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPKGSQEG
TKYIQNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWM
LRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLTMNGCS
VEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRDGFE
SVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSF
DNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLP
DYSSIEIMRDKLLIAAREGQQSFHLS
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgactcgataggaggaaggtcacatttagggcaggcaaaa
cacaagggaaatatccctcctgagagtagaaaatctaattctaaggcacccaaagcacag
tctaacactactgaactgtcaaggggacacctttctaaaagaagctgcagttcatcatct
gctgtcatagttccgcagccagaggatccagacagagccaatacttcagaaaggcagaaa
acggggcaggtgcctaagaaagacaattctcgaggagtgaaacgcagtgctagtccagac
tacaacaggaccaattctcctagctctgcaaaaaagcccagagcacttcagcattttgag
tctctctcagaaacaaataagccacatagtaagtcaaagaagagacatttagaccaggaa
caactgaaatctgcacaattgccatcaacaagcaaggctcacaccagaaagagtggggcc
gctggtagttcacggagtcagaaaagaaagaggacagagatttcttgtgtgaagagtggt
tctgggtccgaatcaactggtgccgaagagagatctgcaaaacccaccaagctggcttca
aaatcggccacctcagccaaagctgggtgtagcaccatcactgattcttcttctgctgcc
tctacttcctcctcatcttctgctgtagcctcggcctcttcgactgtaccaccaggtgcc
agggtgaaacaaggaaaagaccagaacaaggccaggcgttcccgttcggcgtccagtcct
agtcccagaagaagtagcagggagaaggaacagagtaaaactggtggctcttcaaaattt
gattgggctgctcgtttcagccctaaagttagcctacctaaaacaaaactgtctcttcca
gggtcttctaagtcagagacatcaaaacctggaccttctggattacaggccaaattagca
agtttaagaaaatctaccaagaagcgcagtgagtccccacctgctgagctccccagtttg
aggaggagcacacgccaaaagaccacgggctcctgtgctagtaccagtcggcgaggctct
ggcctgggcaagagaggagcagctgaggcccggcggcaggagaaaatggcagaccctgaa
agcaaccaggagacagtgaattcttcagctgccaggacagatgaaactccccaaggagct
gcagcctctagttctgttgcaggggctgttggcatgaccacctctggggagagtgaatcg
gatgattctgagatgggacgattgcaagctctgttagaggccaggggtcttcctcctcac
ctgtttggtcctcttggtcctcggatgtcacaacttttccatagaacaattggaagcgga
gctagttctaaggcccagcagcttctgcaaggactacaagccagtgatgagagtcaacag
cttcaggcggtcattgaaatgtgtcagctattggtcatgggaaatgaggaaacactggga
gggtttcctgtgaagagtgttgttccagctttgataacattactgcagatggaacataat
tttgatattatgaatcatgcttgccgagccttaacatacatgatggaagcacttccacga
tcatctgctgttgtagtcgatgctattccggtctttctagaaaagttgcaggtgattcag
tgcattgatgtggcagagcaggccttgactgccttggaaatgttgtctcggcgacacagt
aaagccattctacaggcgggtggtttggcagactgcttgctgtatctagaattcttcagc
ataaatgcccaaagaaatgcactagcaattgcagccaattgctgccagagtatcacacca
gatgagtttcattttgtggcagattccctcccattgcttacccaaaggctcactcaccag
gacaaaaagtcagtagaaagcacttgcctttgttttgcacgtctagtggacaactttcaa
catgaggagaatttactgcagcaggttgcctccaaagatcttcttacaaatgttcaacaa
ctcttggtagtgactccaccaattttaagttctgggatgtttataatggtggttcgcatg
ttttctctgatgtgttccaactgcccaacattagctgttcaacttatgaaacaaaatatt
gcagaaacacttcacttcctcctgtgtggtgcctccaatggaagttgtcaggaacagatt
gatcttgttccacgaagtcctcaagaactgtatgaattgacatctctaatttgtgaactt
atgccatgtttaccaaaagaaggcatttttgcagttgataccatgttgaagaagggaaat
gcacagaacacagatggtgccatatggcagtggcgtgatgaccggggcctctggcatccc
tataacaggattgacagccggatcattgaggtagcagcccatcaggtcggtgaggatgag
ataagcttgtccactctgggacgagtttatactattgattttaattctatgcagcaaatc
aatgaggacacgggaacagcacgtgccattcagagaaaacctaaccccttagccaatact
aacactagtggatattcagaattaaagaaggatgatgctcgagcacaactaatgaaagag
gatccagacctggctaagtcttttatcaagacattatttggtgttctttatgaagtgtat
agttcctcagcaggacctgcagtcagacataagtgccttagagcaattcttaggataatt
tattttgctgatgcggaacttctgaaggatgttctgaaaaatcatgctgtttcaagtcac
attgcttccatgctatcaagccaagacctgaagatagtagttggggcacttcagatggca
gagatcttaatgcaaaagttacccgatatttttagtgtttacttcagaagagaaggtgtg
atgcatcaagtaaaacatttagcagaatcagagtctttgttgacaagtccaccaaaggcg
tgtacaaatgggtcaggatccttgggatctacaacatcagtcagcagtgggacagccaca
gctgcaaccaacgccactgctgatctggggtcacccagcttgcagcatagcagagatgat
tctctggacctgagccctcaaggtcggttaagtgatgttcttaagagaaaacggctgcca
aaacgggggccaagaagacccaagtactcgcccccgagagatgatgacaaagtagacaat
ccagctaaaagccctaccactactcagtcacctaaatcttccttcctggcaagcttgaat
ccaaaaacatggggaaggttaagtgcacagtcaaatagcaacaacattgagccggcacga
actgcgggagttagtggtcttgccagggctgcctcaaaggacaccatatcaaataataga
gaaaaaattaaaggttggattaaggagcaggcacacaaatttgtagagcgttattttagt
tctgagaatatggatggaagcaaccctgccttgaatgtccttcagagactttgtgctgca
actgaacaactcaacctccaggtggatggtggagctgagtgccttgtagaaatccgtagc
atagtctcagagtctgatgtttcatcatttgaaatccaacatagtggatttgtgaaacag
ttgttgctgtatttgacctctaaaagtgaaaaggatgctgtgagcagagagatccgatta
aaacgattcctacatgtatttttttcttctccacttcctggagaagagcccattggaaga
gtagaaccagtgggcaatgcacctttgttggcattagttcacaagatgaacaactgcctc
agccaaatggaacaatttccagtcaaagtgcatgatttccctagtggaaatgggactgga
ggcagcttttctctcaacagaggatcacaagctttaaaatttttcaacacacatcagcta
aaatgtcagttacaaagacatccagactgtgcaaatgtgaagcagtggaaaggtgggcct
gtcaagatcgaccccctggctttggtacaagctattgagagatatcttgtggttagaggg
tatggaagagtcagagaagatgatgaagatagtgatgatgatggatcagatgaagaaata
gatgaatctctggctgctcagtttttaaattcaggaaatgtaagacacaggctacagttt
tatattggagaacatttgctaccctataacatgactgtgtaccaggcagtacggcagttc
agtatacaggctgaagatgagagagaatctactgatgatgagagtaatcctcttggaaga
gctggcatttggacaaagactcacacaatatggtacaaacctgtgagagaggaagaagaa
agcagtaaagactctgtcggtggcaaaagaggaagagcccaaacagctcctacaaaaact
tcccccagaaatgcaaaaaagcatgatgagttgtggcatgatggagtatgcccatcagtg
tcaaatccattagaagtttacctcatttccacaccacctgaaaatatcacctttgaagat
ccatccttagacgtgatcctccttttaagagttttacacgccgtcagtcgttactggtat
tatttgtatgataatgcaatgtgcaaggagattattccaactagtgaatttattaatagt
aagttgacagcaaaagcaaataggcagcttcaagatcctttagtaatcatgacaggaaac
atcccaacatggcttactgagctaggaaaaacctgcccattcttctttccttttgatacc
cgacaaatgcttttttatgtaactgcatttgatcgggaccgggcaatgcaaagattgctt
gataccaacccagaaattaaccaatctgattcacaagatagtagagttgcacctagattg
gatagaaaaaaacgcactgtgaacagagaggagctgctgaaacaggcggagtctgtgatg
caggacctgggcagctcccgggccatgttagaaatccagtatgaaaatgaggttggtaca
ggtcttgggccaacactggagttttatgcacttgtatctcaggaactacagagagctgac
ttgggtctctggagaggtgaagaagtaacacttagcaatccaaaaggaagccaagaaggg
accaagtatattcaaaacctccagggcctgtttgcgcttccctttggtaggacagctaag
ccagctcatatcgcaaaggttaagatgaagtttcgcttcttaggaaaattaatggctaag
gctatcatggatttcagattggtggaccttccccttggcttgcctttttataagtggatg
ctgcggcaggaaacttcactgacatctcacgatttatttgacatcgatcctgttgtagcc
agatcagtatatcacctagaagacattgtaagacagaagaaaagactggagcaggataaa
tcgcagaccaaagagagcctacagtatgcattagaaacccttactatgaatggctgttca
gttgaagatctaggattggatttcacgctgccagggtttcccaacatcgaactgaagaaa
ggaggaaaggatataccagtcactatccacaacttagaggagtatctaagactggtaata
ttctgggctctaaatgaaggtgtttccaggcaatttgattctttcagagatggatttgaa
tcagttttcccccttagtcacctgcagtacttctacccagaagaattggatcagctcctg
tgtggcagtaaagcagacacttgggatgcaaagacattgatggaatgctgcaggcctgat
catggttatactcacgacagccgggctgtgaagtttttgtttgagattctcagtagtttt
gataacgagcagcaacggttatttctccagtttgtgactggtagcccacgattgcctgtt
ggaggatttcgaagtctcaatccacccctgacaattgttcggaagacatttgaatcaaca
gaaaacccagatgacttcttaccctctgtaatgacttgtgtgaactatcttaagttgccg
gactactcaagcattgaaataatgcgggacaaactcttgatagcagcaagagaagggcag
cagtcgttccatctttcctga
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integrated database retrieval system
